Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 AC097510.1-201ENST00000510945 133 ntBASIC2.37□□□□□ -2.03
SH3RF1Q7Z6J0 SNORA77B-201ENST00000578179 125 ntBASIC2.37□□□□□ -2.03
SH3RF1Q7Z6J0 SNRPGP19-201ENST00000603826 189 ntBASIC2.37□□□□□ -2.03
SH3RF1Q7Z6J0 AL627230.6-201ENST00000611129 280 ntBASIC2.37□□□□□ -2.03
SH3RF1Q7Z6J0 AL773524.1-201ENST00000614065 229 ntBASIC2.37□□□□□ -2.03
SH3RF1Q7Z6J0 RNU6-664P-201ENST00000362381 107 ntBASIC2.36□□□□□ -2.03
SH3RF1Q7Z6J0 SNORD113.1-201ENST00000363280 73 ntBASIC2.36□□□□□ -2.03
SH3RF1Q7Z6J0 RNU6-654P-201ENST00000364373 107 ntBASIC2.36□□□□□ -2.03
SH3RF1Q7Z6J0 SNORA16B-201ENST00000364674 135 ntBASIC2.36□□□□□ -2.03
SH3RF1Q7Z6J0 RNA5SP160-201ENST00000364866 120 ntBASIC2.36□□□□□ -2.03
SH3RF1Q7Z6J0 Y_RNA.536-201ENST00000384621 113 ntBASIC2.36□□□□□ -2.03
SH3RF1Q7Z6J0 RNA5SP95-201ENST00000410319 137 ntBASIC2.36□□□□□ -2.03
SH3RF1Q7Z6J0 RNA5SP338-201ENST00000410495 85 ntBASIC2.36□□□□□ -2.03
SH3RF1Q7Z6J0 RNU7-195P-201ENST00000458793 62 ntBASIC2.36□□□□□ -2.03
SH3RF1Q7Z6J0 snoU13.25-201ENST00000458945 104 ntBASIC2.36□□□□□ -2.03
SH3RF1Q7Z6J0 RNA5SP82-201ENST00000516707 92 ntBASIC2.36□□□□□ -2.03
SH3RF1Q7Z6J0 MIR5089-201ENST00000580047 84 ntBASIC2.36□□□□□ -2.03
SH3RF1Q7Z6J0 MTRNR2L2-201ENST00000604882 87 ntBASIC2.36□□□□□ -2.03
SH3RF1Q7Z6J0 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SH3RF1Q7Z6J0 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.35□□□□□ -2.03
SH3RF1Q7Z6J0 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SH3RF1Q7Z6J0 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SH3RF1Q7Z6J0 RNU6-1260P-201ENST00000362944 107 ntBASIC2.35□□□□□ -2.03
SH3RF1Q7Z6J0 RNU6-824P-201ENST00000363724 104 ntBASIC2.35□□□□□ -2.03
SH3RF1Q7Z6J0 MIR1257-201ENST00000408490 117 ntBASIC2.35□□□□□ -2.03
SH3RF1Q7Z6J0 RNU6-977P-201ENST00000516411 103 ntBASIC2.35□□□□□ -2.03
SH3RF1Q7Z6J0 AP003716.2-201ENST00000528260 108 ntBASIC2.35□□□□□ -2.03
SH3RF1Q7Z6J0 MIR4713-201ENST00000582691 75 ntBASIC2.35□□□□□ -2.03
SH3RF1Q7Z6J0 MIR6895-201ENST00000613497 78 ntBASIC2.35□□□□□ -2.03
SH3RF1Q7Z6J0 DLEU2_3.1-201ENST00000620005 73 ntBASIC2.35□□□□□ -2.03
SH3RF1Q7Z6J0 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SH3RF1Q7Z6J0 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.35□□□□□ -2.03
SH3RF1Q7Z6J0 RNU6-580P-201ENST00000365159 107 ntBASIC2.34□□□□□ -2.03
SH3RF1Q7Z6J0 RNA5SP37-201ENST00000365420 130 ntBASIC2.34□□□□□ -2.03
SH3RF1Q7Z6J0 SNORD101-201ENST00000384027 73 ntBASIC2.34□□□□□ -2.03
SH3RF1Q7Z6J0 RNU6-717P-201ENST00000459076 104 ntBASIC2.34□□□□□ -2.03
SH3RF1Q7Z6J0 AC025033.1-201ENST00000463883 194 ntBASIC2.34□□□□□ -2.03
SH3RF1Q7Z6J0 MIR6132-201ENST00000622083 109 ntBASIC2.34□□□□□ -2.03
SH3RF1Q7Z6J0 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
SH3RF1Q7Z6J0 AC023934.1-201ENST00000574529 2389 ntBASIC2.34□□□□□ -2.04
SH3RF1Q7Z6J0 MIR583-201ENST00000384846 75 ntBASIC2.33□□□□□ -2.04
SH3RF1Q7Z6J0 MIR17-201ENST00000385012 84 ntBASIC2.33□□□□□ -2.04
SH3RF1Q7Z6J0 Y_RNA.809-201ENST00000516058 95 ntBASIC2.33□□□□□ -2.04
SH3RF1Q7Z6J0 AC013244.2-201ENST00000603396 103 ntBASIC2.33□□□□□ -2.04
SH3RF1Q7Z6J0 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.33□□□□□ -2.04
SH3RF1Q7Z6J0 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
SH3RF1Q7Z6J0 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SH3RF1Q7Z6J0 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.32□□□□□ -2.04
SH3RF1Q7Z6J0 Y_RNA.118-201ENST00000363300 101 ntBASIC2.32□□□□□ -2.04
SH3RF1Q7Z6J0 RNU7-185P-201ENST00000459215 60 ntBASIC2.32□□□□□ -2.04
SH3RF1Q7Z6J0 Y_RNA.783-201ENST00000613546 102 ntBASIC2.32□□□□□ -2.04
SH3RF1Q7Z6J0 AC069503.3-201ENST00000618674 145 ntBASIC2.32□□□□□ -2.04
SH3RF1Q7Z6J0 U6.100-201ENST00000636230 99 ntBASIC2.32□□□□□ -2.04
SH3RF1Q7Z6J0 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SH3RF1Q7Z6J0 Y_RNA.56-201ENST00000362798 112 ntBASIC2.31□□□□□ -2.04
SH3RF1Q7Z6J0 SNORA40.6-201ENST00000391153 128 ntBASIC2.31□□□□□ -2.04
SH3RF1Q7Z6J0 snoU13.9-201ENST00000458927 103 ntBASIC2.31□□□□□ -2.04
SH3RF1Q7Z6J0 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.31□□□□□ -2.04
SH3RF1Q7Z6J0 snoU13.31-201ENST00000607291 104 ntBASIC2.31□□□□□ -2.04
SH3RF1Q7Z6J0 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.3□□□□□ -2.04
SH3RF1Q7Z6J0 RNU6-1065P-201ENST00000384513 106 ntBASIC2.3□□□□□ -2.04
SH3RF1Q7Z6J0 RNU6-604P-201ENST00000390917 100 ntBASIC2.3□□□□□ -2.04
SH3RF1Q7Z6J0 AC079804.2-201ENST00000490376 200 ntBASIC2.3□□□□□ -2.04
SH3RF1Q7Z6J0 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.3□□□□□ -2.04
SH3RF1Q7Z6J0 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SH3RF1Q7Z6J0 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SH3RF1Q7Z6J0 SNORD33-201ENST00000362761 85 ntBASIC2.29□□□□□ -2.04
SH3RF1Q7Z6J0 RNA5SP233-201ENST00000459153 113 ntBASIC2.29□□□□□ -2.04
SH3RF1Q7Z6J0 AC079140.2-201ENST00000506193 142 ntBASIC2.29□□□□□ -2.04
SH3RF1Q7Z6J0 MIR514B-201ENST00000516774 80 ntBASIC2.29□□□□□ -2.04
SH3RF1Q7Z6J0 MIR3664-201ENST00000579074 99 ntBASIC2.29□□□□□ -2.04
SH3RF1Q7Z6J0 DLEU2_3.2-201ENST00000612883 73 ntBASIC2.29□□□□□ -2.04
SH3RF1Q7Z6J0 MIR6082-201ENST00000613604 109 ntBASIC2.29□□□□□ -2.04
SH3RF1Q7Z6J0 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SH3RF1Q7Z6J0 Y_RNA.13-201ENST00000362403 112 ntBASIC2.28□□□□□ -2.04
SH3RF1Q7Z6J0 Y_RNA.355-201ENST00000365462 98 ntBASIC2.28□□□□□ -2.04
SH3RF1Q7Z6J0 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.28□□□□□ -2.04
SH3RF1Q7Z6J0 RNU6-935P-201ENST00000410371 100 ntBASIC2.28□□□□□ -2.04
SH3RF1Q7Z6J0 RNU1-40P-201ENST00000516816 164 ntBASIC2.28□□□□□ -2.04
SH3RF1Q7Z6J0 RNU1-97P-201ENST00000516872 164 ntBASIC2.28□□□□□ -2.04
SH3RF1Q7Z6J0 AC019176.1-201ENST00000518519 225 ntBASIC2.28□□□□□ -2.04
SH3RF1Q7Z6J0 MIR6840-201ENST00000611937 71 ntBASIC2.28□□□□□ -2.04
SH3RF1Q7Z6J0 AL109933.3-201ENST00000619095 188 ntBASIC2.28□□□□□ -2.04
SH3RF1Q7Z6J0 RNU6-829P-201ENST00000363700 112 ntBASIC2.27□□□□□ -2.05
SH3RF1Q7Z6J0 Y_RNA.236-201ENST00000364427 111 ntBASIC2.27□□□□□ -2.05
SH3RF1Q7Z6J0 RNU6-321P-201ENST00000410912 106 ntBASIC2.27□□□□□ -2.05
SH3RF1Q7Z6J0 RNU6-765P-201ENST00000516916 99 ntBASIC2.27□□□□□ -2.05
SH3RF1Q7Z6J0 SNORA44.1-201ENST00000517031 108 ntBASIC2.27□□□□□ -2.05
SH3RF1Q7Z6J0 MIR4299-201ENST00000577899 72 ntBASIC2.27□□□□□ -2.05
SH3RF1Q7Z6J0 MIR3937-201ENST00000580135 106 ntBASIC2.27□□□□□ -2.05
SH3RF1Q7Z6J0 MIR5694-201ENST00000581190 76 ntBASIC2.27□□□□□ -2.05
SH3RF1Q7Z6J0 MIR378A-201ENST00000362177 66 ntBASIC2.26□□□□□ -2.05
SH3RF1Q7Z6J0 RNU6-1187P-201ENST00000364771 110 ntBASIC2.26□□□□□ -2.05
SH3RF1Q7Z6J0 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.26□□□□□ -2.05
SH3RF1Q7Z6J0 RNU6-752P-201ENST00000516376 102 ntBASIC2.26□□□□□ -2.05
SH3RF1Q7Z6J0 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
SH3RF1Q7Z6J0 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
SH3RF1Q7Z6J0 RNU6-1054P-201ENST00000411293 104 ntBASIC2.25□□□□□ -2.05
SH3RF1Q7Z6J0 AC097635.1-201ENST00000450678 155 ntBASIC2.25□□□□□ -2.05
SH3RF1Q7Z6J0 Y_RNA.697-201ENST00000516776 113 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 180.6 ms