Protein–RNA interactions for Protein: Q6A163

KRT39, Keratin, type I cytoskeletal 39, humanhuman

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39Q6A163 RNU6-1313P-201ENST00000362622 102 ntBASIC0.32□□□□□ -2.36
KRT39Q6A163 Y_RNA.85-201ENST00000363014 111 ntBASIC0.32□□□□□ -2.36
KRT39Q6A163 Y_RNA.98-201ENST00000363109 102 ntBASIC0.32□□□□□ -2.36
KRT39Q6A163 Y_RNA.205-201ENST00000364128 113 ntBASIC0.32□□□□□ -2.36
KRT39Q6A163 RNU6-865P-201ENST00000364772 107 ntBASIC0.32□□□□□ -2.36
KRT39Q6A163 Y_RNA.360-201ENST00000365512 102 ntBASIC0.32□□□□□ -2.36
KRT39Q6A163 RNU6-1144P-201ENST00000384247 104 ntBASIC0.32□□□□□ -2.36
KRT39Q6A163 Y_RNA.466-201ENST00000384294 113 ntBASIC0.32□□□□□ -2.36
KRT39Q6A163 RNU6-429P-201ENST00000384582 108 ntBASIC0.32□□□□□ -2.36
KRT39Q6A163 Y_RNA.536-201ENST00000384621 113 ntBASIC0.32□□□□□ -2.36
KRT39Q6A163 RNU6-535P-201ENST00000384722 107 ntBASIC0.32□□□□□ -2.36
KRT39Q6A163 MIR759-201ENST00000390224 91 ntBASIC0.32□□□□□ -2.36
KRT39Q6A163 RNU6-1154P-201ENST00000391001 104 ntBASIC0.32□□□□□ -2.36
KRT39Q6A163 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.32□□□□□ -2.36
KRT39Q6A163 RNU2-51P-201ENST00000410708 197 ntBASIC0.32□□□□□ -2.36
KRT39Q6A163 BX276092.1-201ENST00000427368 251 ntBASIC0.32□□□□□ -2.36
KRT39Q6A163 AL606753.1-201ENST00000427435 87 ntBASIC0.32□□□□□ -2.36
KRT39Q6A163 AC108740.1-201ENST00000498629 225 ntBASIC0.32□□□□□ -2.36
KRT39Q6A163 RNU6-1194P-201ENST00000516208 104 ntBASIC0.32□□□□□ -2.36
KRT39Q6A163 RNU6-789P-201ENST00000517105 102 ntBASIC0.32□□□□□ -2.36
KRT39Q6A163 AC090625.1-201ENST00000357130 210 ntBASIC0.31□□□□□ -2.36
KRT39Q6A163 Y_RNA.281-201ENST00000364774 94 ntBASIC0.31□□□□□ -2.36
KRT39Q6A163 U8.6-201ENST00000364939 135 ntBASIC0.31□□□□□ -2.36
KRT39Q6A163 RNU6-1201P-201ENST00000384227 107 ntBASIC0.31□□□□□ -2.36
KRT39Q6A163 SNORD116-21-201ENST00000384507 92 ntBASIC0.31□□□□□ -2.36
KRT39Q6A163 RNU6-880P-201ENST00000384526 107 ntBASIC0.31□□□□□ -2.36
KRT39Q6A163 RNU6-476P-201ENST00000384726 107 ntBASIC0.31□□□□□ -2.36
KRT39Q6A163 MIR577-201ENST00000385196 96 ntBASIC0.31□□□□□ -2.36
KRT39Q6A163 SNRPGP12-201ENST00000449481 213 ntBASIC0.31□□□□□ -2.36
KRT39Q6A163 RPL39P34-201ENST00000477141 156 ntBASIC0.31□□□□□ -2.36
KRT39Q6A163 RNU6-469P-201ENST00000516253 101 ntBASIC0.31□□□□□ -2.36
KRT39Q6A163 RNU6-313P-201ENST00000516317 112 ntBASIC0.31□□□□□ -2.36
KRT39Q6A163 MIR4500-201ENST00000579472 76 ntBASIC0.31□□□□□ -2.36
KRT39Q6A163 MIR3613-201ENST00000579844 87 ntBASIC0.31□□□□□ -2.36
KRT39Q6A163 MIR6129-201ENST00000616087 109 ntBASIC0.31□□□□□ -2.36
KRT39Q6A163 MIR6779-201ENST00000617283 64 ntBASIC0.31□□□□□ -2.36
KRT39Q6A163 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.31□□□□□ -2.36
KRT39Q6A163 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.31□□□□□ -2.36
KRT39Q6A163 Y_RNA.155-201ENST00000363632 101 ntBASIC0.3□□□□□ -2.36
KRT39Q6A163 RNU6-409P-201ENST00000384114 104 ntBASIC0.3□□□□□ -2.36
KRT39Q6A163 Y_RNA.507-201ENST00000384500 99 ntBASIC0.3□□□□□ -2.36
KRT39Q6A163 MIR7-2-201ENST00000384970 110 ntBASIC0.3□□□□□ -2.36
KRT39Q6A163 RNU6-1064P-201ENST00000410626 104 ntBASIC0.3□□□□□ -2.36
KRT39Q6A163 TRAJ51-201ENST00000504127 63 ntBASIC0.3□□□□□ -2.36
KRT39Q6A163 RNU6-62P-201ENST00000516526 102 ntBASIC0.3□□□□□ -2.36
KRT39Q6A163 AC068339.1-201ENST00000526965 141 ntBASIC0.3□□□□□ -2.36
KRT39Q6A163 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.3□□□□□ -2.36
KRT39Q6A163 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.3□□□□□ -2.36
KRT39Q6A163 MIR101-2-201ENST00000362195 79 ntBASIC0.29□□□□□ -2.36
KRT39Q6A163 Y_RNA.56-201ENST00000362798 112 ntBASIC0.29□□□□□ -2.36
KRT39Q6A163 Y_RNA.174-201ENST00000363781 105 ntBASIC0.29□□□□□ -2.36
KRT39Q6A163 Y_RNA.309-201ENST00000365046 111 ntBASIC0.29□□□□□ -2.36
KRT39Q6A163 Y_RNA.323-201ENST00000365157 109 ntBASIC0.29□□□□□ -2.36
KRT39Q6A163 RNU6-1327P-201ENST00000365302 105 ntBASIC0.29□□□□□ -2.36
KRT39Q6A163 MIR193B-201ENST00000384907 83 ntBASIC0.29□□□□□ -2.36
KRT39Q6A163 MIR1912-201ENST00000410389 80 ntBASIC0.29□□□□□ -2.36
KRT39Q6A163 SNORA19.1-201ENST00000410656 129 ntBASIC0.29□□□□□ -2.36
KRT39Q6A163 RNU6-589P-201ENST00000516485 107 ntBASIC0.29□□□□□ -2.36
KRT39Q6A163 RNA5SP134-201ENST00000516492 96 ntBASIC0.29□□□□□ -2.36
KRT39Q6A163 RNU6-1018P-201ENST00000516577 106 ntBASIC0.29□□□□□ -2.36
KRT39Q6A163 RNU6-850P-201ENST00000516934 103 ntBASIC0.29□□□□□ -2.36
KRT39Q6A163 MIR5009-201ENST00000578736 100 ntBASIC0.29□□□□□ -2.36
KRT39Q6A163 AL512310.12-203ENST00000640543 90 ntBASIC0.29□□□□□ -2.36
KRT39Q6A163 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
KRT39Q6A163 RNU6-1107P-201ENST00000364817 104 ntBASIC0.28□□□□□ -2.36
KRT39Q6A163 Y_RNA.377-201ENST00000365644 108 ntBASIC0.28□□□□□ -2.36
KRT39Q6A163 SNORD63B-201ENST00000411005 70 ntBASIC0.28□□□□□ -2.36
KRT39Q6A163 AC244505.6-201ENST00000452829 130 ntBASIC0.28□□□□□ -2.36
KRT39Q6A163 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.28□□□□□ -2.36
KRT39Q6A163 MIR4694-201ENST00000578534 80 ntBASIC0.28□□□□□ -2.36
KRT39Q6A163 AL442128.1-201ENST00000615151 90 ntBASIC0.28□□□□□ -2.36
KRT39Q6A163 AC091304.10-201ENST00000641554 121 ntBASIC0.28□□□□□ -2.36
KRT39Q6A163 RNU6-834P-201ENST00000362367 110 ntBASIC0.27□□□□□ -2.37
KRT39Q6A163 RNU6-170P-201ENST00000362832 104 ntBASIC0.27□□□□□ -2.37
KRT39Q6A163 RNY3P2-201ENST00000362918 102 ntBASIC0.27□□□□□ -2.37
KRT39Q6A163 RNU6-1290P-201ENST00000362957 109 ntBASIC0.27□□□□□ -2.37
KRT39Q6A163 RNU6-832P-201ENST00000363319 107 ntBASIC0.27□□□□□ -2.37
KRT39Q6A163 RNU6-1099P-201ENST00000363533 107 ntBASIC0.27□□□□□ -2.37
KRT39Q6A163 SNORD114-26-201ENST00000363543 72 ntBASIC0.27□□□□□ -2.37
KRT39Q6A163 Y_RNA.173-201ENST00000363776 113 ntBASIC0.27□□□□□ -2.37
KRT39Q6A163 SNORD38.1-201ENST00000363863 68 ntBASIC0.27□□□□□ -2.37
KRT39Q6A163 Y_RNA.273-201ENST00000364703 102 ntBASIC0.27□□□□□ -2.37
KRT39Q6A163 RNU6-1014P-201ENST00000383940 103 ntBASIC0.27□□□□□ -2.37
KRT39Q6A163 RNU6-1056P-201ENST00000383996 107 ntBASIC0.27□□□□□ -2.37
KRT39Q6A163 RNU6-571P-201ENST00000384128 107 ntBASIC0.27□□□□□ -2.37
KRT39Q6A163 Y_RNA.540-201ENST00000384638 111 ntBASIC0.27□□□□□ -2.37
KRT39Q6A163 MIR548I2-201ENST00000408348 149 ntBASIC0.27□□□□□ -2.37
KRT39Q6A163 MIR548G-201ENST00000408442 89 ntBASIC0.27□□□□□ -2.37
KRT39Q6A163 RNU7-195P-201ENST00000458793 62 ntBASIC0.27□□□□□ -2.37
KRT39Q6A163 RNU7-106P-201ENST00000459514 67 ntBASIC0.27□□□□□ -2.37
KRT39Q6A163 RNA5SP47-201ENST00000517230 109 ntBASIC0.27□□□□□ -2.37
KRT39Q6A163 MIR548H5-201ENST00000580314 60 ntBASIC0.27□□□□□ -2.37
KRT39Q6A163 uc_338.28-201ENST00000612082 187 ntBASIC0.27□□□□□ -2.37
KRT39Q6A163 RNU6-1163P-201ENST00000364516 107 ntBASIC0.26□□□□□ -2.37
KRT39Q6A163 Y_RNA.291-201ENST00000364886 113 ntBASIC0.26□□□□□ -2.37
KRT39Q6A163 RNU6-106P-201ENST00000384405 107 ntBASIC0.26□□□□□ -2.37
KRT39Q6A163 SNORD28-201ENST00000384706 75 ntBASIC0.26□□□□□ -2.37
KRT39Q6A163 MIR516A2-201ENST00000384888 90 ntBASIC0.26□□□□□ -2.37
KRT39Q6A163 MIR516A1-201ENST00000385033 90 ntBASIC0.26□□□□□ -2.37
KRT39Q6A163 MIR599-201ENST00000385069 95 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 178.4 ms