Protein–RNA interactions for Protein: Q16695

HIST3H3, Histone H3.1t, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H3Q16695 MIR1302-9-201ENST00000408365 138 ntBASIC-1.86□□□□□ -2.71
HIST3H3Q16695 MIR1302-10-201ENST00000408734 138 ntBASIC-1.86□□□□□ -2.71
HIST3H3Q16695 RNU7-123P-201ENST00000515911 60 ntBASIC-1.86□□□□□ -2.71
HIST3H3Q16695 MIR4520-1-201ENST00000582609 70 ntBASIC-1.86□□□□□ -2.71
HIST3H3Q16695 MIR1302-2-201ENST00000607096 138 ntBASIC-1.86□□□□□ -2.71
HIST3H3Q16695 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-1.86□□□□□ -2.71
HIST3H3Q16695 AC092794.1-201ENST00000612734 582 ntBASIC-1.86□□□□□ -2.71
HIST3H3Q16695 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-1.86□□□□□ -2.71
HIST3H3Q16695 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.87□□□□□ -2.71
HIST3H3Q16695 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.87□□□□□ -2.71
HIST3H3Q16695 Y_RNA.384-201ENST00000383909 102 ntBASIC-1.87□□□□□ -2.71
HIST3H3Q16695 MIR34C-201ENST00000384831 77 ntBASIC-1.87□□□□□ -2.71
HIST3H3Q16695 MIRLET7B-201ENST00000385140 83 ntBASIC-1.87□□□□□ -2.71
HIST3H3Q16695 RNU6-576P-201ENST00000390854 102 ntBASIC-1.87□□□□□ -2.71
HIST3H3Q16695 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.87□□□□□ -2.71
HIST3H3Q16695 RNA5SP266-201ENST00000410273 108 ntBASIC-1.87□□□□□ -2.71
HIST3H3Q16695 RNU6-976P-201ENST00000516086 111 ntBASIC-1.87□□□□□ -2.71
HIST3H3Q16695 MIR6129-201ENST00000616087 109 ntBASIC-1.87□□□□□ -2.71
HIST3H3Q16695 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-1.87□□□□□ -2.71
HIST3H3Q16695 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.88□□□□□ -2.71
HIST3H3Q16695 RNU6-54P-201ENST00000365563 107 ntBASIC-1.88□□□□□ -2.71
HIST3H3Q16695 SNORD38.2-201ENST00000384470 69 ntBASIC-1.88□□□□□ -2.71
HIST3H3Q16695 SNORD57-201ENST00000448188 72 ntBASIC-1.88□□□□□ -2.71
HIST3H3Q16695 Y_RNA.16-201ENST00000362421 102 ntBASIC-1.89□□□□□ -2.71
HIST3H3Q16695 RNU4-24P-201ENST00000364565 139 ntBASIC-1.89□□□□□ -2.71
HIST3H3Q16695 RNU6-746P-201ENST00000384112 109 ntBASIC-1.89□□□□□ -2.71
HIST3H3Q16695 RNU4-61P-201ENST00000411243 107 ntBASIC-1.89□□□□□ -2.71
HIST3H3Q16695 RNA5SP236-201ENST00000516169 116 ntBASIC-1.89□□□□□ -2.71
HIST3H3Q16695 AC026421.1-201ENST00000519101 163 ntBASIC-1.89□□□□□ -2.71
HIST3H3Q16695 AL353803.5-201ENST00000599815 141 ntBASIC-1.89□□□□□ -2.71
HIST3H3Q16695 MIR6818-201ENST00000621576 65 ntBASIC-1.89□□□□□ -2.71
HIST3H3Q16695 RNU6-208P-201ENST00000362431 107 ntBASIC-1.9□□□□□ -2.71
HIST3H3Q16695 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.9□□□□□ -2.71
HIST3H3Q16695 RNU6-103P-201ENST00000363686 107 ntBASIC-1.9□□□□□ -2.71
HIST3H3Q16695 SNORD114-4-201ENST00000363962 75 ntBASIC-1.9□□□□□ -2.71
HIST3H3Q16695 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.9□□□□□ -2.71
HIST3H3Q16695 AC138393.2-201ENST00000414742 246 ntBASIC-1.9□□□□□ -2.71
HIST3H3Q16695 SNORA40.15-201ENST00000516884 107 ntBASIC-1.9□□□□□ -2.71
HIST3H3Q16695 SNORD36A-201ENST00000362874 73 ntBASIC-1.91□□□□□ -2.72
HIST3H3Q16695 Y_RNA.76-201ENST00000362931 109 ntBASIC-1.91□□□□□ -2.72
HIST3H3Q16695 RNU6-957P-201ENST00000363652 99 ntBASIC-1.91□□□□□ -2.72
HIST3H3Q16695 RNU4-17P-201ENST00000365598 141 ntBASIC-1.91□□□□□ -2.72
HIST3H3Q16695 Y_RNA.556-201ENST00000384677 113 ntBASIC-1.91□□□□□ -2.72
HIST3H3Q16695 RNU6-1109P-201ENST00000391187 107 ntBASIC-1.91□□□□□ -2.72
HIST3H3Q16695 RNU7-152P-201ENST00000458982 64 ntBASIC-1.91□□□□□ -2.72
HIST3H3Q16695 SCARNA24.2-201ENST00000516968 130 ntBASIC-1.91□□□□□ -2.72
HIST3H3Q16695 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.92□□□□□ -2.72
HIST3H3Q16695 SNORD101-201ENST00000384027 73 ntBASIC-1.92□□□□□ -2.72
HIST3H3Q16695 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.92□□□□□ -2.72
HIST3H3Q16695 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.92□□□□□ -2.72
HIST3H3Q16695 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.92□□□□□ -2.72
HIST3H3Q16695 MIR4320-201ENST00000636981 65 ntBASIC-1.92□□□□□ -2.72
HIST3H3Q16695 RNU6-226P-201ENST00000363778 107 ntBASIC-1.93□□□□□ -2.72
HIST3H3Q16695 SNORA62.4-201ENST00000365504 151 ntBASIC-1.93□□□□□ -2.72
HIST3H3Q16695 Y_RNA.521-201ENST00000384560 114 ntBASIC-1.93□□□□□ -2.72
HIST3H3Q16695 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.93□□□□□ -2.72
HIST3H3Q16695 MIR4464-201ENST00000580818 92 ntBASIC-1.93□□□□□ -2.72
HIST3H3Q16695 AL365265.1-201ENST00000621045 234 ntBASIC-1.93□□□□□ -2.72
HIST3H3Q16695 RNU4-32P-201ENST00000363404 141 ntBASIC-1.94□□□□□ -2.72
HIST3H3Q16695 RNU6-1215P-201ENST00000384441 102 ntBASIC-1.94□□□□□ -2.72
HIST3H3Q16695 SNORD63.1-201ENST00000516178 80 ntBASIC-1.94□□□□□ -2.72
HIST3H3Q16695 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.94□□□□□ -2.72
HIST3H3Q16695 MIR4770-201ENST00000579149 58 ntBASIC-1.94□□□□□ -2.72
HIST3H3Q16695 MIR4744-201ENST00000581563 82 ntBASIC-1.94□□□□□ -2.72
HIST3H3Q16695 Y_RNA.298-201ENST00000364960 107 ntBASIC-1.95□□□□□ -2.72
HIST3H3Q16695 SNORD116-2-201ENST00000384274 95 ntBASIC-1.95□□□□□ -2.72
HIST3H3Q16695 MIR29B1-201ENST00000385015 81 ntBASIC-1.95□□□□□ -2.72
HIST3H3Q16695 RNU6-876P-201ENST00000391295 104 ntBASIC-1.95□□□□□ -2.72
HIST3H3Q16695 SNORD2.1-201ENST00000458762 69 ntBASIC-1.95□□□□□ -2.72
HIST3H3Q16695 SNORD42B-201ENST00000458893 67 ntBASIC-1.95□□□□□ -2.72
HIST3H3Q16695 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.96□□□□□ -2.72
HIST3H3Q16695 RNU6-450P-201ENST00000364654 107 ntBASIC-1.96□□□□□ -2.72
HIST3H3Q16695 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.96□□□□□ -2.72
HIST3H3Q16695 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.96□□□□□ -2.72
HIST3H3Q16695 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.96□□□□□ -2.72
HIST3H3Q16695 RNU6-277P-201ENST00000516272 106 ntBASIC-1.96□□□□□ -2.72
HIST3H3Q16695 MIR4308-201ENST00000580634 81 ntBASIC-1.96□□□□□ -2.72
HIST3H3Q16695 MIR6888-201ENST00000621977 67 ntBASIC-1.96□□□□□ -2.72
HIST3H3Q16695 AC091912.2-201ENST00000624798 167 ntBASIC-1.96□□□□□ -2.72
HIST3H3Q16695 MIR6874-201ENST00000635894 71 ntBASIC-1.96□□□□□ -2.72
HIST3H3Q16695 MIR1302-1-201ENST00000637932 143 ntBASIC-1.96□□□□□ -2.72
HIST3H3Q16695 RNU6-664P-201ENST00000362381 107 ntBASIC-1.97□□□□□ -2.72
HIST3H3Q16695 Y_RNA.44-201ENST00000362676 108 ntBASIC-1.97□□□□□ -2.72
HIST3H3Q16695 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.97□□□□□ -2.72
HIST3H3Q16695 Y_RNA.173-201ENST00000363776 113 ntBASIC-1.97□□□□□ -2.72
HIST3H3Q16695 RNU6-651P-201ENST00000411040 105 ntBASIC-1.97□□□□□ -2.72
HIST3H3Q16695 AC022028.1-201ENST00000412054 408 ntBASIC-1.97□□□□□ -2.72
HIST3H3Q16695 MIR4696-201ENST00000581431 70 ntBASIC-1.97□□□□□ -2.72
HIST3H3Q16695 YWHAEP3-201ENST00000582767 121 ntBASIC-1.97□□□□□ -2.72
HIST3H3Q16695 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.97□□□□□ -2.72
HIST3H3Q16695 RNA5SP331-201ENST00000364986 107 ntBASIC-1.98□□□□□ -2.73
HIST3H3Q16695 RNY3P15-201ENST00000516297 97 ntBASIC-1.98□□□□□ -2.73
HIST3H3Q16695 RNA5SP461-201ENST00000516451 104 ntBASIC-1.98□□□□□ -2.73
HIST3H3Q16695 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1.98□□□□□ -2.73
HIST3H3Q16695 AC073869.6-201ENST00000640656 341 ntBASIC-1.98□□□□□ -2.73
HIST3H3Q16695 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.99□□□□□ -2.73
HIST3H3Q16695 RNU6-770P-201ENST00000363929 105 ntBASIC-1.99□□□□□ -2.73
HIST3H3Q16695 MT-TL1-201ENST00000386347 75 ntBASIC-1.99□□□□□ -2.73
HIST3H3Q16695 RNU6-466P-201ENST00000391224 103 ntBASIC-1.99□□□□□ -2.73
HIST3H3Q16695 MIR1252-201ENST00000408861 65 ntBASIC-1.99□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 239.5 ms