Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
PCDH1Q08174 RNU6-315P-201ENST00000362666 107 ntBASIC1.72□□□□□ -2.13
PCDH1Q08174 RNU6-624P-201ENST00000363411 107 ntBASIC1.72□□□□□ -2.13
PCDH1Q08174 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
PCDH1Q08174 RNU6-132P-201ENST00000383863 107 ntBASIC1.72□□□□□ -2.13
PCDH1Q08174 RNU6-1296P-201ENST00000383879 107 ntBASIC1.72□□□□□ -2.13
PCDH1Q08174 MIR548U-201ENST00000390728 81 ntBASIC1.72□□□□□ -2.13
PCDH1Q08174 RNA5SP292-201ENST00000390974 118 ntBASIC1.72□□□□□ -2.13
PCDH1Q08174 SNORA40.18-201ENST00000391200 128 ntBASIC1.72□□□□□ -2.13
PCDH1Q08174 RNU7-90P-201ENST00000459216 62 ntBASIC1.72□□□□□ -2.13
PCDH1Q08174 Y_RNA.809-201ENST00000516058 95 ntBASIC1.72□□□□□ -2.13
PCDH1Q08174 Y_RNA.697-201ENST00000516776 113 ntBASIC1.72□□□□□ -2.13
PCDH1Q08174 MIR4419B-201ENST00000577260 68 ntBASIC1.72□□□□□ -2.13
PCDH1Q08174 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.72□□□□□ -2.13
PCDH1Q08174 AC104996.3-201ENST00000590718 94 ntBASIC1.72□□□□□ -2.13
PCDH1Q08174 MIR4662A-201ENST00000637499 67 ntBASIC1.72□□□□□ -2.13
PCDH1Q08174 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.72□□□□□ -2.13
PCDH1Q08174 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.72□□□□□ -2.13
PCDH1Q08174 SNORD79.1-201ENST00000516069 84 ntBASIC1.71□□□□□ -2.14
PCDH1Q08174 SNORA18.5-201ENST00000516616 101 ntBASIC1.71□□□□□ -2.14
PCDH1Q08174 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
PCDH1Q08174 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
PCDH1Q08174 RNU6-1260P-201ENST00000362944 107 ntBASIC1.7□□□□□ -2.14
PCDH1Q08174 RNU6-364P-201ENST00000384387 107 ntBASIC1.7□□□□□ -2.14
PCDH1Q08174 RNU6-994P-201ENST00000410507 111 ntBASIC1.7□□□□□ -2.14
PCDH1Q08174 AL450471.1-201ENST00000447509 127 ntBASIC1.7□□□□□ -2.14
PCDH1Q08174 RNU6-448P-201ENST00000517052 107 ntBASIC1.7□□□□□ -2.14
PCDH1Q08174 AL645939.4-201ENST00000604495 135 ntBASIC1.7□□□□□ -2.14
PCDH1Q08174 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
PCDH1Q08174 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
PCDH1Q08174 RNU6-478P-201ENST00000363904 110 ntBASIC1.69□□□□□ -2.14
PCDH1Q08174 MIR938-201ENST00000401216 83 ntBASIC1.69□□□□□ -2.14
PCDH1Q08174 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.69□□□□□ -2.14
PCDH1Q08174 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.69□□□□□ -2.14
PCDH1Q08174 MIRLET7F1-201ENST00000362202 87 ntBASIC1.68□□□□□ -2.14
PCDH1Q08174 RNU1-17P-201ENST00000363022 152 ntBASIC1.68□□□□□ -2.14
PCDH1Q08174 RNU6-776P-201ENST00000364403 104 ntBASIC1.68□□□□□ -2.14
PCDH1Q08174 RNU6-1022P-201ENST00000365049 104 ntBASIC1.68□□□□□ -2.14
PCDH1Q08174 Y_RNA.491-201ENST00000384417 107 ntBASIC1.68□□□□□ -2.14
PCDH1Q08174 AC003989.2-201ENST00000440224 169 ntBASIC1.68□□□□□ -2.14
PCDH1Q08174 AC097635.1-201ENST00000450678 155 ntBASIC1.68□□□□□ -2.14
PCDH1Q08174 TRDV1-202ENST00000621643 102 ntBASIC1.68□□□□□ -2.14
PCDH1Q08174 AC027335.2-201ENST00000624030 375 ntBASIC1.68□□□□□ -2.14
PCDH1Q08174 RNU6-369P-201ENST00000362515 102 ntBASIC1.67□□□□□ -2.14
PCDH1Q08174 SNORA63.2-201ENST00000362603 126 ntBASIC1.67□□□□□ -2.14
PCDH1Q08174 MIR518E-201ENST00000385252 88 ntBASIC1.67□□□□□ -2.14
PCDH1Q08174 RNU6-557P-201ENST00000516842 110 ntBASIC1.67□□□□□ -2.14
PCDH1Q08174 AC138907.6-201ENST00000568401 126 ntBASIC1.67□□□□□ -2.14
PCDH1Q08174 AC138869.1-201ENST00000568623 124 ntBASIC1.67□□□□□ -2.14
PCDH1Q08174 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.67□□□□□ -2.14
PCDH1Q08174 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
PCDH1Q08174 AL606490.4-201ENST00000423117 127 ntBASIC1.66□□□□□ -2.14
PCDH1Q08174 RNU7-102P-201ENST00000458948 62 ntBASIC1.66□□□□□ -2.14
PCDH1Q08174 FGF7P7-201ENST00000514120 227 ntBASIC1.66□□□□□ -2.14
PCDH1Q08174 SNORA70.22-201ENST00000517160 124 ntBASIC1.66□□□□□ -2.14
PCDH1Q08174 MIR4804-201ENST00000581683 73 ntBASIC1.66□□□□□ -2.14
PCDH1Q08174 MIR6845-201ENST00000613182 61 ntBASIC1.66□□□□□ -2.14
PCDH1Q08174 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.65□□□□□ -2.14
PCDH1Q08174 RNU6-291P-201ENST00000384720 107 ntBASIC1.65□□□□□ -2.15
PCDH1Q08174 RNU6-535P-201ENST00000384722 107 ntBASIC1.65□□□□□ -2.15
PCDH1Q08174 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
PCDH1Q08174 RNU6-977P-201ENST00000516411 103 ntBASIC1.65□□□□□ -2.15
PCDH1Q08174 MIR599-201ENST00000385069 95 ntBASIC1.64□□□□□ -2.15
PCDH1Q08174 MIR100-201ENST00000385259 80 ntBASIC1.64□□□□□ -2.15
PCDH1Q08174 RNU6-1094P-201ENST00000362416 104 ntBASIC1.63□□□□□ -2.15
PCDH1Q08174 RNU6-686P-201ENST00000364839 107 ntBASIC1.63□□□□□ -2.15
PCDH1Q08174 RNU6-997P-201ENST00000384725 107 ntBASIC1.63□□□□□ -2.15
PCDH1Q08174 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.63□□□□□ -2.15
PCDH1Q08174 SNORD12-201ENST00000391002 90 ntBASIC1.63□□□□□ -2.15
PCDH1Q08174 Y_RNA.660-201ENST00000516002 120 ntBASIC1.63□□□□□ -2.15
PCDH1Q08174 MIR4285-201ENST00000581001 85 ntBASIC1.63□□□□□ -2.15
PCDH1Q08174 AC084768.2-201ENST00000622736 221 ntBASIC1.63□□□□□ -2.15
PCDH1Q08174 MIR1-1-201ENST00000362147 71 ntBASIC1.62□□□□□ -2.15
PCDH1Q08174 MIRLET7A1-201ENST00000362295 80 ntBASIC1.62□□□□□ -2.15
PCDH1Q08174 RNU6-161P-201ENST00000363051 106 ntBASIC1.62□□□□□ -2.15
PCDH1Q08174 RNA5SP245-201ENST00000364239 121 ntBASIC1.62□□□□□ -2.15
PCDH1Q08174 SNORA25.9-201ENST00000365087 128 ntBASIC1.62□□□□□ -2.15
PCDH1Q08174 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.62□□□□□ -2.15
PCDH1Q08174 RNU7-56P-201ENST00000458744 62 ntBASIC1.62□□□□□ -2.15
PCDH1Q08174 AC008608.1-201ENST00000603910 127 ntBASIC1.62□□□□□ -2.15
PCDH1Q08174 Y_RNA.239-201ENST00000364444 113 ntBASIC1.61□□□□□ -2.15
PCDH1Q08174 RNU1-119P-201ENST00000391122 165 ntBASIC1.61□□□□□ -2.15
PCDH1Q08174 MIR889-201ENST00000401280 79 ntBASIC1.61□□□□□ -2.15
PCDH1Q08174 RNU6-380P-201ENST00000410207 107 ntBASIC1.61□□□□□ -2.15
PCDH1Q08174 AC067940.1-201ENST00000458411 300 ntBASIC1.61□□□□□ -2.15
PCDH1Q08174 RNU6-1053P-201ENST00000515930 101 ntBASIC1.61□□□□□ -2.15
PCDH1Q08174 RNU6-1108P-201ENST00000516308 104 ntBASIC1.61□□□□□ -2.15
PCDH1Q08174 SNORA25.15-201ENST00000516487 89 ntBASIC1.61□□□□□ -2.15
PCDH1Q08174 MIR4781-201ENST00000585250 76 ntBASIC1.61□□□□□ -2.15
PCDH1Q08174 AC145423.2-201ENST00000610631 239 ntBASIC1.61□□□□□ -2.15
PCDH1Q08174 U6.100-201ENST00000636230 99 ntBASIC1.61□□□□□ -2.15
PCDH1Q08174 SNORD101-201ENST00000384027 73 ntBASIC1.6□□□□□ -2.15
PCDH1Q08174 MIR222-201ENST00000384992 110 ntBASIC1.6□□□□□ -2.15
PCDH1Q08174 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.6□□□□□ -2.15
PCDH1Q08174 AC108667.1-201ENST00000428618 249 ntBASIC1.6□□□□□ -2.15
PCDH1Q08174 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.6□□□□□ -2.15
PCDH1Q08174 MIR502-201ENST00000606349 86 ntBASIC1.6□□□□□ -2.15
PCDH1Q08174 RNU6-664P-201ENST00000362381 107 ntBASIC1.59□□□□□ -2.15
PCDH1Q08174 RNA5SP363-201ENST00000365072 115 ntBASIC1.59□□□□□ -2.15
PCDH1Q08174 MIR520F-201ENST00000384824 87 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms