Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 RNU7-164P-201ENST00000459221 62 ntBASIC-1.58□□□□□ -2.66
PRKDCP78527 RNU2-35P-201ENST00000516446 142 ntBASIC-1.58□□□□□ -2.66
PRKDCP78527 RNU6-807P-201ENST00000516805 107 ntBASIC-1.58□□□□□ -2.66
PRKDCP78527 Y_RNA.248-201ENST00000364501 109 ntBASIC-1.58□□□□□ -2.66
PRKDCP78527 RNU6-593P-201ENST00000364716 112 ntBASIC-1.58□□□□□ -2.66
PRKDCP78527 SNORD116-11-201ENST00000383882 92 ntBASIC-1.58□□□□□ -2.66
PRKDCP78527 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.58□□□□□ -2.66
PRKDCP78527 RNU6-1000P-201ENST00000391066 106 ntBASIC-1.58□□□□□ -2.66
PRKDCP78527 MTCO2P24-201ENST00000515611 426 ntBASIC-1.58□□□□□ -2.66
PRKDCP78527 RNU6-1129P-201ENST00000515964 104 ntBASIC-1.58□□□□□ -2.66
PRKDCP78527 RNU6-864P-201ENST00000516256 108 ntBASIC-1.58□□□□□ -2.66
PRKDCP78527 RNU6-1299P-201ENST00000516316 100 ntBASIC-1.58□□□□□ -2.66
PRKDCP78527 SCARNA15-202ENST00000516881 127 ntBASIC-1.58□□□□□ -2.66
PRKDCP78527 MIR1244-1-201ENST00000612829 85 ntBASIC-1.58□□□□□ -2.66
PRKDCP78527 MIR1244-3-201ENST00000635744 85 ntBASIC-1.58□□□□□ -2.66
PRKDCP78527 MIR1244-2-201ENST00000636449 85 ntBASIC-1.58□□□□□ -2.66
PRKDCP78527 MIR1244-4-202ENST00000636813 85 ntBASIC-1.58□□□□□ -2.66
PRKDCP78527 MIR3662-201ENST00000637030 95 ntBASIC-1.58□□□□□ -2.66
PRKDCP78527 RNU6-690P-201ENST00000365242 106 ntBASIC-1.59□□□□□ -2.66
PRKDCP78527 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.59□□□□□ -2.66
PRKDCP78527 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.59□□□□□ -2.66
PRKDCP78527 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.59□□□□□ -2.66
PRKDCP78527 SNORD19-201ENST00000391191 68 ntBASIC-1.59□□□□□ -2.66
PRKDCP78527 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.59□□□□□ -2.66
PRKDCP78527 AL593851.1-201ENST00000426171 157 ntBASIC-1.59□□□□□ -2.66
PRKDCP78527 MTND4LP30-201ENST00000454092 297 ntBASIC-1.59□□□□□ -2.66
PRKDCP78527 RNU6-256P-201ENST00000516747 97 ntBASIC-1.59□□□□□ -2.66
PRKDCP78527 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.59□□□□□ -2.66
PRKDCP78527 RNU6-630P-201ENST00000391258 106 ntBASIC-1.59□□□□□ -2.66
PRKDCP78527 RPL35AP4-201ENST00000412007 102 ntBASIC-1.59□□□□□ -2.66
PRKDCP78527 AC009161.1-201ENST00000417306 376 ntBASIC-1.59□□□□□ -2.66
PRKDCP78527 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-1.59□□□□□ -2.66
PRKDCP78527 RNU6-415P-201ENST00000516252 97 ntBASIC-1.59□□□□□ -2.66
PRKDCP78527 RNU6-978P-201ENST00000364371 103 ntBASIC-1.6□□□□□ -2.67
PRKDCP78527 Y_RNA.266-201ENST00000364678 96 ntBASIC-1.6□□□□□ -2.67
PRKDCP78527 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.6□□□□□ -2.67
PRKDCP78527 RNU6-141P-201ENST00000410499 105 ntBASIC-1.6□□□□□ -2.67
PRKDCP78527 MIR6863-201ENST00000636112 90 ntBASIC-1.6□□□□□ -2.67
PRKDCP78527 Y_RNA.31-201ENST00000362574 102 ntBASIC-1.6□□□□□ -2.67
PRKDCP78527 RNU6-246P-201ENST00000384702 107 ntBASIC-1.6□□□□□ -2.67
PRKDCP78527 Y_RNA.570-201ENST00000384750 101 ntBASIC-1.6□□□□□ -2.67
PRKDCP78527 MIR628-201ENST00000385229 95 ntBASIC-1.6□□□□□ -2.67
PRKDCP78527 AL118496.2-201ENST00000448300 230 ntBASIC-1.6□□□□□ -2.67
PRKDCP78527 MIR23C-201ENST00000579846 100 ntBASIC-1.6□□□□□ -2.67
PRKDCP78527 U6.92-201ENST00000636464 89 ntBASIC-1.6□□□□□ -2.67
PRKDCP78527 RNU6-1252P-201ENST00000363054 104 ntBASIC-1.6□□□□□ -2.67
PRKDCP78527 RNU6-260P-201ENST00000384092 107 ntBASIC-1.6□□□□□ -2.67
PRKDCP78527 MT-TH-201ENST00000387441 69 ntBASIC-1.6□□□□□ -2.67
PRKDCP78527 Y_RNA.701-201ENST00000516812 110 ntBASIC-1.6□□□□□ -2.67
PRKDCP78527 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-1.61□□□□□ -2.67
PRKDCP78527 RNU6-129P-201ENST00000391022 107 ntBASIC-1.61□□□□□ -2.67
PRKDCP78527 RNU2-4P-201ENST00000606190 192 ntBASIC-1.61□□□□□ -2.67
PRKDCP78527 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.61□□□□□ -2.67
PRKDCP78527 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.61□□□□□ -2.67
PRKDCP78527 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.61□□□□□ -2.67
PRKDCP78527 MIR548AB-201ENST00000584917 84 ntBASIC-1.61□□□□□ -2.67
PRKDCP78527 RNU6-89P-201ENST00000606519 100 ntBASIC-1.61□□□□□ -2.67
PRKDCP78527 MIR548Q-201ENST00000408404 100 ntBASIC-1.61□□□□□ -2.67
PRKDCP78527 Y_RNA.424-201ENST00000384063 103 ntBASIC-1.62□□□□□ -2.67
PRKDCP78527 Y_RNA.473-201ENST00000384333 102 ntBASIC-1.62□□□□□ -2.67
PRKDCP78527 CCDC34P1-201ENST00000507441 517 ntBASIC-1.62□□□□□ -2.67
PRKDCP78527 MIR4509-3-201ENST00000578671 94 ntBASIC-1.62□□□□□ -2.67
PRKDCP78527 MIR4509-2-201ENST00000583920 94 ntBASIC-1.62□□□□□ -2.67
PRKDCP78527 MIR4509-1-201ENST00000618224 94 ntBASIC-1.62□□□□□ -2.67
PRKDCP78527 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.62□□□□□ -2.67
PRKDCP78527 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-1.62□□□□□ -2.67
PRKDCP78527 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-1.62□□□□□ -2.67
PRKDCP78527 SNORA20.3-201ENST00000516880 132 ntBASIC-1.62□□□□□ -2.67
PRKDCP78527 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.62□□□□□ -2.67
PRKDCP78527 RNU6-99P-201ENST00000364721 107 ntBASIC-1.63□□□□□ -2.67
PRKDCP78527 RNU6-696P-201ENST00000390834 107 ntBASIC-1.63□□□□□ -2.67
PRKDCP78527 AF228730.3-201ENST00000436691 102 ntBASIC-1.63□□□□□ -2.67
PRKDCP78527 AC048344.4-201ENST00000619744 527 ntBASIC-1.63□□□□□ -2.67
PRKDCP78527 AL365265.1-201ENST00000621045 234 ntBASIC-1.63□□□□□ -2.67
PRKDCP78527 MIR759-201ENST00000390224 91 ntBASIC-1.63□□□□□ -2.67
PRKDCP78527 AC107399.1-201ENST00000451226 265 ntBASIC-1.63□□□□□ -2.67
PRKDCP78527 MTND2P31-201ENST00000512602 616 ntBASIC-1.63□□□□□ -2.67
PRKDCP78527 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC-1.63□□□□□ -2.67
PRKDCP78527 RNU6-1068P-201ENST00000410958 103 ntBASIC-1.63□□□□□ -2.67
PRKDCP78527 RNU6-65P-201ENST00000516332 98 ntBASIC-1.63□□□□□ -2.67
PRKDCP78527 RNU6-453P-201ENST00000516819 85 ntBASIC-1.63□□□□□ -2.67
PRKDCP78527 RNU6-519P-201ENST00000410590 108 ntBASIC-1.64□□□□□ -2.67
PRKDCP78527 AL731563.1-201ENST00000442202 214 ntBASIC-1.64□□□□□ -2.67
PRKDCP78527 MTND3P22-201ENST00000510932 243 ntBASIC-1.64□□□□□ -2.67
PRKDCP78527 Y_RNA.655-201ENST00000515919 96 ntBASIC-1.64□□□□□ -2.67
PRKDCP78527 RNU6-764P-201ENST00000516396 105 ntBASIC-1.64□□□□□ -2.67
PRKDCP78527 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.64□□□□□ -2.67
PRKDCP78527 AP002795.1-201ENST00000534879 84 ntBASIC-1.64□□□□□ -2.67
PRKDCP78527 Y_RNA.80-201ENST00000362996 102 ntBASIC-1.64□□□□□ -2.67
PRKDCP78527 SNORD115-22-201ENST00000364456 82 ntBASIC-1.64□□□□□ -2.67
PRKDCP78527 RNY3P10-201ENST00000384764 102 ntBASIC-1.64□□□□□ -2.67
PRKDCP78527 RNU4-69P-201ENST00000410677 143 ntBASIC-1.64□□□□□ -2.67
PRKDCP78527 RBMX2P4-201ENST00000441256 376 ntBASIC-1.64□□□□□ -2.67
PRKDCP78527 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.64□□□□□ -2.67
PRKDCP78527 NBR2-204ENST00000587322 63 ntBASIC-1.64□□□□□ -2.67
PRKDCP78527 AL022161.1-201ENST00000604390 213 ntBASIC-1.64□□□□□ -2.67
PRKDCP78527 RNU4-17P-201ENST00000365598 141 ntBASIC-1.64□□□□□ -2.67
PRKDCP78527 snoU13.10-201ENST00000459301 103 ntBASIC-1.64□□□□□ -2.67
PRKDCP78527 RNU6-957P-201ENST00000363652 99 ntBASIC-1.64□□□□□ -2.67
PRKDCP78527 RNU6-681P-201ENST00000364012 104 ntBASIC-1.64□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 192.1 ms