Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 RNU6-746P-201ENST00000384112 109 ntBASIC0.35□□□□□ -2.35
IRX4P78413 SNORA7.5-201ENST00000410672 110 ntBASIC0.35□□□□□ -2.35
IRX4P78413 RNA5SP227-201ENST00000516184 113 ntBASIC0.35□□□□□ -2.35
IRX4P78413 RNA5SP285-201ENST00000516619 119 ntBASIC0.35□□□□□ -2.35
IRX4P78413 AC138869.1-201ENST00000568623 124 ntBASIC0.35□□□□□ -2.35
IRX4P78413 RNU7-10P-201ENST00000607194 63 ntBASIC0.35□□□□□ -2.35
IRX4P78413 MIR7107-201ENST00000611489 80 ntBASIC0.35□□□□□ -2.35
IRX4P78413 AC244669.1-204ENST00000621564 178 ntBASIC0.35□□□□□ -2.35
IRX4P78413 MIR103A1-201ENST00000362165 78 ntBASIC0.34□□□□□ -2.36
IRX4P78413 SNORD115-24-201ENST00000363528 82 ntBASIC0.34□□□□□ -2.36
IRX4P78413 Y_RNA.218-201ENST00000364218 104 ntBASIC0.34□□□□□ -2.36
IRX4P78413 RNU4-67P-201ENST00000364569 141 ntBASIC0.34□□□□□ -2.36
IRX4P78413 Y_RNA.344-201ENST00000365381 112 ntBASIC0.34□□□□□ -2.36
IRX4P78413 Y_RNA.49-201ENST00000362714 112 ntBASIC0.33□□□□□ -2.36
IRX4P78413 RNY4P6-201ENST00000363667 96 ntBASIC0.33□□□□□ -2.36
IRX4P78413 SNORD50.2-201ENST00000365465 70 ntBASIC0.33□□□□□ -2.36
IRX4P78413 Y_RNA.360-201ENST00000365512 102 ntBASIC0.33□□□□□ -2.36
IRX4P78413 MIR635-201ENST00000384830 98 ntBASIC0.33□□□□□ -2.36
IRX4P78413 AC244505.6-201ENST00000452829 130 ntBASIC0.33□□□□□ -2.36
IRX4P78413 HAR1A.1-201ENST00000459583 118 ntBASIC0.33□□□□□ -2.36
IRX4P78413 TRAJ51-201ENST00000504127 63 ntBASIC0.33□□□□□ -2.36
IRX4P78413 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.33□□□□□ -2.36
IRX4P78413 AC091304.10-201ENST00000641554 121 ntBASIC0.33□□□□□ -2.36
IRX4P78413 RNU6-704P-201ENST00000364162 103 ntBASIC0.32□□□□□ -2.36
IRX4P78413 RNU6-80P-201ENST00000384195 107 ntBASIC0.32□□□□□ -2.36
IRX4P78413 MIR6828-201ENST00000636181 60 ntBASIC0.32□□□□□ -2.36
IRX4P78413 Y_RNA.155-201ENST00000363632 101 ntBASIC0.31□□□□□ -2.36
IRX4P78413 Y_RNA.362-201ENST00000365518 110 ntBASIC0.31□□□□□ -2.36
IRX4P78413 RNU6-571P-201ENST00000384128 107 ntBASIC0.31□□□□□ -2.36
IRX4P78413 SNORD38.2-201ENST00000384470 69 ntBASIC0.31□□□□□ -2.36
IRX4P78413 Y_RNA.507-201ENST00000384500 99 ntBASIC0.31□□□□□ -2.36
IRX4P78413 MIR599-201ENST00000385069 95 ntBASIC0.31□□□□□ -2.36
IRX4P78413 MIR548I2-201ENST00000408348 149 ntBASIC0.31□□□□□ -2.36
IRX4P78413 SNRPGP12-201ENST00000449481 213 ntBASIC0.31□□□□□ -2.36
IRX4P78413 AC097635.1-201ENST00000450678 155 ntBASIC0.31□□□□□ -2.36
IRX4P78413 RNU7-104P-201ENST00000459398 79 ntBASIC0.31□□□□□ -2.36
IRX4P78413 RNA5SP134-201ENST00000516492 96 ntBASIC0.31□□□□□ -2.36
IRX4P78413 AC067863.3-201ENST00000624172 122 ntBASIC0.31□□□□□ -2.36
IRX4P78413 MIR3914-2-201ENST00000637339 95 ntBASIC0.31□□□□□ -2.36
IRX4P78413 RNU6-170P-201ENST00000362832 104 ntBASIC0.3□□□□□ -2.36
IRX4P78413 RNU6-363P-201ENST00000362895 105 ntBASIC0.3□□□□□ -2.36
IRX4P78413 MIR548M-201ENST00000408260 86 ntBASIC0.3□□□□□ -2.36
IRX4P78413 SNORD33.1-201ENST00000516213 88 ntBASIC0.3□□□□□ -2.36
IRX4P78413 MIR6718-201ENST00000616153 80 ntBASIC0.3□□□□□ -2.36
IRX4P78413 AL512310.12-203ENST00000640543 90 ntBASIC0.3□□□□□ -2.36
IRX4P78413 RNU6-1313P-201ENST00000362622 102 ntBASIC0.29□□□□□ -2.36
IRX4P78413 Y_RNA.71-201ENST00000362892 104 ntBASIC0.29□□□□□ -2.36
IRX4P78413 SNORD44.1-201ENST00000363202 61 ntBASIC0.29□□□□□ -2.36
IRX4P78413 RNU6-409P-201ENST00000384114 104 ntBASIC0.29□□□□□ -2.36
IRX4P78413 RNU6-816P-201ENST00000390914 107 ntBASIC0.29□□□□□ -2.36
IRX4P78413 RNU6-1268P-201ENST00000391214 107 ntBASIC0.29□□□□□ -2.36
IRX4P78413 RNU6-1239P-201ENST00000391310 107 ntBASIC0.29□□□□□ -2.36
IRX4P78413 MIR548L-201ENST00000408303 86 ntBASIC0.29□□□□□ -2.36
IRX4P78413 SNORD63B-201ENST00000411005 70 ntBASIC0.29□□□□□ -2.36
IRX4P78413 AL353813.1-201ENST00000440700 253 ntBASIC0.29□□□□□ -2.36
IRX4P78413 Y_RNA.649-201ENST00000459077 103 ntBASIC0.29□□□□□ -2.36
IRX4P78413 RNU6-850P-201ENST00000516934 103 ntBASIC0.29□□□□□ -2.36
IRX4P78413 Y_RNA.712-201ENST00000517011 92 ntBASIC0.29□□□□□ -2.36
IRX4P78413 RNU7-161P-201ENST00000517289 62 ntBASIC0.29□□□□□ -2.36
IRX4P78413 MTND5P40-201ENST00000559945 246 ntBASIC0.29□□□□□ -2.36
IRX4P78413 AL035470.1-201ENST00000622571 220 ntBASIC0.29□□□□□ -2.36
IRX4P78413 AC090625.1-201ENST00000357130 210 ntBASIC0.28□□□□□ -2.36
IRX4P78413 Y_RNA.221-201ENST00000364248 96 ntBASIC0.28□□□□□ -2.36
IRX4P78413 AC069271.1-201ENST00000445577 156 ntBASIC0.28□□□□□ -2.36
IRX4P78413 RNU7-195P-201ENST00000458793 62 ntBASIC0.28□□□□□ -2.36
IRX4P78413 RNU6-659P-201ENST00000516454 104 ntBASIC0.28□□□□□ -2.36
IRX4P78413 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.28□□□□□ -2.36
IRX4P78413 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.28□□□□□ -2.36
IRX4P78413 AL162726.3-218ENST00000636401 95 ntBASIC0.28□□□□□ -2.36
IRX4P78413 SNORD116-14-201ENST00000383894 92 ntBASIC0.27□□□□□ -2.37
IRX4P78413 SNORD116-17-201ENST00000383929 92 ntBASIC0.27□□□□□ -2.37
IRX4P78413 SNORD116-15-201ENST00000384445 92 ntBASIC0.27□□□□□ -2.37
IRX4P78413 SNORD116-19-201ENST00000384729 92 ntBASIC0.27□□□□□ -2.37
IRX4P78413 MIR1912-201ENST00000410389 80 ntBASIC0.27□□□□□ -2.37
IRX4P78413 RNU2-59P-201ENST00000410482 191 ntBASIC0.27□□□□□ -2.37
IRX4P78413 Y_RNA.809-201ENST00000516058 95 ntBASIC0.27□□□□□ -2.37
IRX4P78413 RNU6-1006P-201ENST00000516998 103 ntBASIC0.27□□□□□ -2.37
IRX4P78413 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.27□□□□□ -2.37
IRX4P78413 U6.95-201ENST00000636931 70 ntBASIC0.27□□□□□ -2.37
IRX4P78413 RNU6-1099P-201ENST00000363533 107 ntBASIC0.26□□□□□ -2.37
IRX4P78413 RNA5SP403-201ENST00000363598 108 ntBASIC0.26□□□□□ -2.37
IRX4P78413 Y_RNA.247-201ENST00000364500 92 ntBASIC0.26□□□□□ -2.37
IRX4P78413 RNU6-1126P-201ENST00000384002 107 ntBASIC0.26□□□□□ -2.37
IRX4P78413 MIR519A1-201ENST00000385257 85 ntBASIC0.26□□□□□ -2.37
IRX4P78413 SPINT5P-201ENST00000448174 155 ntBASIC0.26□□□□□ -2.37
IRX4P78413 AC108740.1-201ENST00000498629 225 ntBASIC0.26□□□□□ -2.37
IRX4P78413 AC007012.1-201ENST00000567192 175 ntBASIC0.26□□□□□ -2.37
IRX4P78413 SNORD38.1-201ENST00000363863 68 ntBASIC0.25□□□□□ -2.37
IRX4P78413 RNU6-1327P-201ENST00000365302 105 ntBASIC0.25□□□□□ -2.37
IRX4P78413 Y_RNA.342-201ENST00000365352 113 ntBASIC0.25□□□□□ -2.37
IRX4P78413 RNU6-1201P-201ENST00000384227 107 ntBASIC0.25□□□□□ -2.37
IRX4P78413 MIR548A1-201ENST00000385041 97 ntBASIC0.25□□□□□ -2.37
IRX4P78413 MIR548A3-201ENST00000385297 97 ntBASIC0.25□□□□□ -2.37
IRX4P78413 AC073261.1-201ENST00000429409 121 ntBASIC0.25□□□□□ -2.37
IRX4P78413 RPL39P34-201ENST00000477141 156 ntBASIC0.25□□□□□ -2.37
IRX4P78413 RNU6-1333P-201ENST00000516162 93 ntBASIC0.25□□□□□ -2.37
IRX4P78413 RNU6-1018P-201ENST00000516577 106 ntBASIC0.25□□□□□ -2.37
IRX4P78413 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.25□□□□□ -2.37
IRX4P78413 RNU6-726P-201ENST00000364680 107 ntBASIC0.24□□□□□ -2.37
IRX4P78413 Y_RNA.309-201ENST00000365046 111 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 167.9 ms