Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 SNORD77B-201ENST00000391112 67 ntBASIC-1.12□□□□□ -2.59
ACTBP60709 RNU7-123P-201ENST00000515911 60 ntBASIC-1.12□□□□□ -2.59
ACTBP60709 AC009779.6-201ENST00000603972 165 ntBASIC-1.12□□□□□ -2.59
ACTBP60709 Y_RNA.58-201ENST00000362807 102 ntBASIC-1.13□□□□□ -2.59
ACTBP60709 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.13□□□□□ -2.59
ACTBP60709 RNY3P1-201ENST00000365085 102 ntBASIC-1.13□□□□□ -2.59
ACTBP60709 RNU6-643P-201ENST00000384018 107 ntBASIC-1.13□□□□□ -2.59
ACTBP60709 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.13□□□□□ -2.59
ACTBP60709 RNU6-476P-201ENST00000384726 107 ntBASIC-1.13□□□□□ -2.59
ACTBP60709 MIR516A2-201ENST00000384888 90 ntBASIC-1.13□□□□□ -2.59
ACTBP60709 MIR516A1-201ENST00000385033 90 ntBASIC-1.13□□□□□ -2.59
ACTBP60709 RNU6-1109P-201ENST00000391187 107 ntBASIC-1.13□□□□□ -2.59
ACTBP60709 Y_RNA.590-201ENST00000410140 107 ntBASIC-1.13□□□□□ -2.59
ACTBP60709 AC113618.1-201ENST00000416747 285 ntBASIC-1.13□□□□□ -2.59
ACTBP60709 AP000533.3-201ENST00000447704 118 ntBASIC-1.13□□□□□ -2.59
ACTBP60709 RNU7-164P-201ENST00000459221 62 ntBASIC-1.13□□□□□ -2.59
ACTBP60709 AC022137.1-201ENST00000483735 151 ntBASIC-1.13□□□□□ -2.59
ACTBP60709 SNORA40.17-201ENST00000517256 115 ntBASIC-1.13□□□□□ -2.59
ACTBP60709 AC138907.4-201ENST00000570107 226 ntBASIC-1.13□□□□□ -2.59
ACTBP60709 AC021443.1-201ENST00000604478 211 ntBASIC-1.13□□□□□ -2.59
ACTBP60709 Y_RNA.263-201ENST00000364659 114 ntBASIC-1.14□□□□□ -2.59
ACTBP60709 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.14□□□□□ -2.59
ACTBP60709 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.14□□□□□ -2.59
ACTBP60709 RBMX2P4-201ENST00000441256 376 ntBASIC-1.14□□□□□ -2.59
ACTBP60709 RNU6-240P-201ENST00000516098 97 ntBASIC-1.14□□□□□ -2.59
ACTBP60709 Y_RNA.711-201ENST00000516993 102 ntBASIC-1.14□□□□□ -2.59
ACTBP60709 uc_338.19-201ENST00000616808 99 ntBASIC-1.14□□□□□ -2.59
ACTBP60709 MIR4320-201ENST00000636981 65 ntBASIC-1.14□□□□□ -2.59
ACTBP60709 Y_RNA.210-201ENST00000364161 110 ntBASIC-1.15□□□□□ -2.59
ACTBP60709 Y_RNA.262-201ENST00000364641 102 ntBASIC-1.15□□□□□ -2.59
ACTBP60709 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.15□□□□□ -2.59
ACTBP60709 Y_RNA.556-201ENST00000384677 113 ntBASIC-1.15□□□□□ -2.59
ACTBP60709 SNORD64-201ENST00000386683 67 ntBASIC-1.15□□□□□ -2.59
ACTBP60709 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.15□□□□□ -2.59
ACTBP60709 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-1.15□□□□□ -2.59
ACTBP60709 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.16□□□□□ -2.6
ACTBP60709 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.16□□□□□ -2.6
ACTBP60709 Y_RNA.521-201ENST00000384560 114 ntBASIC-1.16□□□□□ -2.6
ACTBP60709 SNX3P1X-201ENST00000414887 175 ntBASIC-1.16□□□□□ -2.6
ACTBP60709 SCARNA18B-201ENST00000458806 135 ntBASIC-1.16□□□□□ -2.6
ACTBP60709 AC097510.1-201ENST00000510945 133 ntBASIC-1.16□□□□□ -2.6
ACTBP60709 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.16□□□□□ -2.6
ACTBP60709 AC113195.1-201ENST00000579952 141 ntBASIC-1.16□□□□□ -2.6
ACTBP60709 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.16□□□□□ -2.6
ACTBP60709 TRDV1-202ENST00000621643 102 ntBASIC-1.16□□□□□ -2.6
ACTBP60709 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.17□□□□□ -2.6
ACTBP60709 RNU4-40P-201ENST00000364351 143 ntBASIC-1.17□□□□□ -2.6
ACTBP60709 RNU6-616P-201ENST00000384353 107 ntBASIC-1.17□□□□□ -2.6
ACTBP60709 RNU6-905P-201ENST00000384434 107 ntBASIC-1.17□□□□□ -2.6
ACTBP60709 MIR147A-201ENST00000385079 72 ntBASIC-1.17□□□□□ -2.6
ACTBP60709 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.17□□□□□ -2.6
ACTBP60709 RNU6-875P-201ENST00000516488 106 ntBASIC-1.17□□□□□ -2.6
ACTBP60709 MIR6854-201ENST00000614935 69 ntBASIC-1.17□□□□□ -2.6
ACTBP60709 U6.100-201ENST00000636230 99 ntBASIC-1.17□□□□□ -2.6
ACTBP60709 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.18□□□□□ -2.6
ACTBP60709 Y_RNA.237-201ENST00000364439 102 ntBASIC-1.18□□□□□ -2.6
ACTBP60709 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.18□□□□□ -2.6
ACTBP60709 Y_RNA.298-201ENST00000364960 107 ntBASIC-1.18□□□□□ -2.6
ACTBP60709 MIR582-201ENST00000365731 98 ntBASIC-1.18□□□□□ -2.6
ACTBP60709 Y_RNA.455-201ENST00000384230 98 ntBASIC-1.18□□□□□ -2.6
ACTBP60709 MIR34C-201ENST00000384831 77 ntBASIC-1.18□□□□□ -2.6
ACTBP60709 Y_RNA.679-201ENST00000516416 91 ntBASIC-1.18□□□□□ -2.6
ACTBP60709 AC139792.2-201ENST00000624218 587 ntBASIC-1.18□□□□□ -2.6
ACTBP60709 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-1.18□□□□□ -2.6
ACTBP60709 MIR382-201ENST00000637119 76 ntBASIC-1.18□□□□□ -2.6
ACTBP60709 MIR369-201ENST00000362155 70 ntBASIC-1.19□□□□□ -2.6
ACTBP60709 SNORD74.6-201ENST00000364796 70 ntBASIC-1.19□□□□□ -2.6
ACTBP60709 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.19□□□□□ -2.6
ACTBP60709 SNORD2-201ENST00000459163 69 ntBASIC-1.19□□□□□ -2.6
ACTBP60709 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.19□□□□□ -2.6
ACTBP60709 MIR335-201ENST00000362173 94 ntBASIC-1.2□□□□□ -2.6
ACTBP60709 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.2□□□□□ -2.6
ACTBP60709 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.2□□□□□ -2.6
ACTBP60709 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.2□□□□□ -2.6
ACTBP60709 RNU6-274P-201ENST00000459566 107 ntBASIC-1.2□□□□□ -2.6
ACTBP60709 AC140658.3-201ENST00000567603 271 ntBASIC-1.2□□□□□ -2.6
ACTBP60709 SNORD36A-201ENST00000362874 73 ntBASIC-1.21□□□□□ -2.6
ACTBP60709 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.21□□□□□ -2.6
ACTBP60709 Y_RNA.356-201ENST00000365475 113 ntBASIC-1.21□□□□□ -2.6
ACTBP60709 MTND3P22-201ENST00000510932 243 ntBASIC-1.21□□□□□ -2.6
ACTBP60709 MIR378F-201ENST00000578143 78 ntBASIC-1.21□□□□□ -2.6
ACTBP60709 MIR548O2-201ENST00000616090 70 ntBASIC-1.21□□□□□ -2.6
ACTBP60709 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.22□□□□□ -2.6
ACTBP60709 MIR216B-201ENST00000390186 82 ntBASIC-1.22□□□□□ -2.6
ACTBP60709 MIR548E-201ENST00000408287 88 ntBASIC-1.22□□□□□ -2.6
ACTBP60709 AL161932.1-201ENST00000437408 146 ntBASIC-1.22□□□□□ -2.6
ACTBP60709 AL353813.1-201ENST00000440700 253 ntBASIC-1.22□□□□□ -2.6
ACTBP60709 RNA5SP470-201ENST00000516463 106 ntBASIC-1.22□□□□□ -2.6
ACTBP60709 Y_RNA.158-201ENST00000363651 101 ntBASIC-1.23□□□□□ -2.61
ACTBP60709 SNORD27-201ENST00000363981 72 ntBASIC-1.23□□□□□ -2.61
ACTBP60709 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.23□□□□□ -2.61
ACTBP60709 MIR1468-201ENST00000410600 86 ntBASIC-1.23□□□□□ -2.61
ACTBP60709 RNU6-592P-201ENST00000411333 103 ntBASIC-1.23□□□□□ -2.61
ACTBP60709 MTATP6P21-201ENST00000440681 189 ntBASIC-1.23□□□□□ -2.61
ACTBP60709 Y_RNA.797-201ENST00000515977 94 ntBASIC-1.23□□□□□ -2.61
ACTBP60709 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.23□□□□□ -2.61
ACTBP60709 Y_RNA.153-201ENST00000363615 91 ntBASIC-1.24□□□□□ -2.61
ACTBP60709 RNU6-1283P-201ENST00000365314 105 ntBASIC-1.24□□□□□ -2.61
ACTBP60709 SNORD38.2-201ENST00000384470 69 ntBASIC-1.24□□□□□ -2.61
ACTBP60709 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.24□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 167.9 ms