Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 SNORD53B-201ENST00000577887 78 ntBASIC1.73□□□□□ -2.13
ERVFC1P60507 RNU7-10P-201ENST00000607194 63 ntBASIC1.73□□□□□ -2.13
ERVFC1P60507 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.73□□□□□ -2.13
ERVFC1P60507 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.73□□□□□ -2.13
ERVFC1P60507 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.72□□□□□ -2.13
ERVFC1P60507 snoU13.9-201ENST00000458927 103 ntBASIC1.72□□□□□ -2.13
ERVFC1P60507 Y_RNA.264-201ENST00000364665 102 ntBASIC1.71□□□□□ -2.14
ERVFC1P60507 Y_RNA.491-201ENST00000384417 107 ntBASIC1.71□□□□□ -2.14
ERVFC1P60507 MIR518E-201ENST00000385252 88 ntBASIC1.71□□□□□ -2.14
ERVFC1P60507 SNORD100-201ENST00000408573 76 ntBASIC1.71□□□□□ -2.14
ERVFC1P60507 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.71□□□□□ -2.14
ERVFC1P60507 MIR3664-201ENST00000579074 99 ntBASIC1.71□□□□□ -2.14
ERVFC1P60507 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.71□□□□□ -2.14
ERVFC1P60507 Y_RNA.56-201ENST00000362798 112 ntBASIC1.7□□□□□ -2.14
ERVFC1P60507 MIR635-201ENST00000384830 98 ntBASIC1.7□□□□□ -2.14
ERVFC1P60507 RNA5SP95-201ENST00000410319 137 ntBASIC1.7□□□□□ -2.14
ERVFC1P60507 RNU6-1054P-201ENST00000411293 104 ntBASIC1.7□□□□□ -2.14
ERVFC1P60507 RNU7-185P-201ENST00000459215 60 ntBASIC1.7□□□□□ -2.14
ERVFC1P60507 AC079140.2-201ENST00000506193 142 ntBASIC1.7□□□□□ -2.14
ERVFC1P60507 MIR548H5-201ENST00000580314 60 ntBASIC1.7□□□□□ -2.14
ERVFC1P60507 MIR4285-201ENST00000581001 85 ntBASIC1.7□□□□□ -2.14
ERVFC1P60507 MIR8063-201ENST00000621930 81 ntBASIC1.7□□□□□ -2.14
ERVFC1P60507 RNU6-161P-201ENST00000363051 106 ntBASIC1.69□□□□□ -2.14
ERVFC1P60507 RNU6-392P-201ENST00000364926 101 ntBASIC1.69□□□□□ -2.14
ERVFC1P60507 Y_RNA.536-201ENST00000384621 113 ntBASIC1.69□□□□□ -2.14
ERVFC1P60507 AC004223.1-201ENST00000479840 271 ntBASIC1.69□□□□□ -2.14
ERVFC1P60507 TRAJ51-201ENST00000504127 63 ntBASIC1.69□□□□□ -2.14
ERVFC1P60507 RNU6-765P-201ENST00000516916 99 ntBASIC1.69□□□□□ -2.14
ERVFC1P60507 RNU6-165P-201ENST00000517170 99 ntBASIC1.69□□□□□ -2.14
ERVFC1P60507 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.69□□□□□ -2.14
ERVFC1P60507 Y_RNA.788-201ENST00000622394 112 ntBASIC1.69□□□□□ -2.14
ERVFC1P60507 MIR1297-201ENST00000637311 77 ntBASIC1.69□□□□□ -2.14
ERVFC1P60507 RNU6-1260P-201ENST00000362944 107 ntBASIC1.68□□□□□ -2.14
ERVFC1P60507 RNU6-403P-201ENST00000363163 104 ntBASIC1.68□□□□□ -2.14
ERVFC1P60507 RNU6-957P-201ENST00000363652 99 ntBASIC1.68□□□□□ -2.14
ERVFC1P60507 SNORD48-201ENST00000364953 64 ntBASIC1.68□□□□□ -2.14
ERVFC1P60507 RNU6-1065P-201ENST00000384513 106 ntBASIC1.68□□□□□ -2.14
ERVFC1P60507 SNORD77.2-201ENST00000391045 68 ntBASIC1.68□□□□□ -2.14
ERVFC1P60507 MIR1323-201ENST00000408090 73 ntBASIC1.68□□□□□ -2.14
ERVFC1P60507 MIR1276-201ENST00000408707 83 ntBASIC1.68□□□□□ -2.14
ERVFC1P60507 MIR6082-201ENST00000613604 109 ntBASIC1.68□□□□□ -2.14
ERVFC1P60507 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
ERVFC1P60507 MIR101-2-201ENST00000362195 79 ntBASIC1.67□□□□□ -2.14
ERVFC1P60507 SNORA7.1-201ENST00000363750 139 ntBASIC1.67□□□□□ -2.14
ERVFC1P60507 SNORA67.6-201ENST00000391093 99 ntBASIC1.67□□□□□ -2.14
ERVFC1P60507 SCARNA18B-201ENST00000458806 135 ntBASIC1.67□□□□□ -2.14
ERVFC1P60507 AC013244.2-201ENST00000603396 103 ntBASIC1.67□□□□□ -2.14
ERVFC1P60507 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
ERVFC1P60507 SNORD113.3-201ENST00000364630 78 ntBASIC1.66□□□□□ -2.14
ERVFC1P60507 Y_RNA.532-201ENST00000384590 113 ntBASIC1.66□□□□□ -2.14
ERVFC1P60507 MIR489-201ENST00000384923 84 ntBASIC1.66□□□□□ -2.14
ERVFC1P60507 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.66□□□□□ -2.14
ERVFC1P60507 RNU7-195P-201ENST00000458793 62 ntBASIC1.66□□□□□ -2.14
ERVFC1P60507 AC114801.3-201ENST00000510231 177 ntBASIC1.66□□□□□ -2.14
ERVFC1P60507 RNU6-1108P-201ENST00000516308 104 ntBASIC1.66□□□□□ -2.14
ERVFC1P60507 RNU6-807P-201ENST00000516805 107 ntBASIC1.66□□□□□ -2.14
ERVFC1P60507 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.66□□□□□ -2.14
ERVFC1P60507 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.66□□□□□ -2.14
ERVFC1P60507 AC023934.1-201ENST00000574529 2389 ntBASIC1.66□□□□□ -2.14
ERVFC1P60507 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.66□□□□□ -2.14
ERVFC1P60507 MIRLET7F1-201ENST00000362202 87 ntBASIC1.65□□□□□ -2.15
ERVFC1P60507 RNU6-411P-201ENST00000384451 107 ntBASIC1.65□□□□□ -2.15
ERVFC1P60507 MIR1257-201ENST00000408490 117 ntBASIC1.65□□□□□ -2.15
ERVFC1P60507 snoU13.18-201ENST00000459483 104 ntBASIC1.65□□□□□ -2.15
ERVFC1P60507 Y_RNA.809-201ENST00000516058 95 ntBASIC1.65□□□□□ -2.15
ERVFC1P60507 AL512310.8-201ENST00000550183 120 ntBASIC1.65□□□□□ -2.15
ERVFC1P60507 MIR3134-201ENST00000579433 74 ntBASIC1.65□□□□□ -2.15
ERVFC1P60507 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.65□□□□□ -2.15
ERVFC1P60507 Y_RNA.13-201ENST00000362403 112 ntBASIC1.64□□□□□ -2.15
ERVFC1P60507 MIR517C-201ENST00000385103 95 ntBASIC1.64□□□□□ -2.15
ERVFC1P60507 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.64□□□□□ -2.15
ERVFC1P60507 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
ERVFC1P60507 AC074348.1-201ENST00000426503 132 ntBASIC1.64□□□□□ -2.15
ERVFC1P60507 AC015818.7-201ENST00000428754 109 ntBASIC1.64□□□□□ -2.15
ERVFC1P60507 AC092628.1-201ENST00000436250 252 ntBASIC1.64□□□□□ -2.15
ERVFC1P60507 snoU13.21-201ENST00000459368 105 ntBASIC1.64□□□□□ -2.15
ERVFC1P60507 AC019176.1-201ENST00000518519 225 ntBASIC1.64□□□□□ -2.15
ERVFC1P60507 AC036111.3-201ENST00000526389 112 ntBASIC1.64□□□□□ -2.15
ERVFC1P60507 MIR4421-201ENST00000578133 69 ntBASIC1.64□□□□□ -2.15
ERVFC1P60507 MIR3937-201ENST00000580135 106 ntBASIC1.64□□□□□ -2.15
ERVFC1P60507 MTRNR2L2-201ENST00000604882 87 ntBASIC1.64□□□□□ -2.15
ERVFC1P60507 ZNF209P-201ENST00000593450 2304 ntBASIC1.64□□□□□ -2.15
ERVFC1P60507 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
ERVFC1P60507 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
ERVFC1P60507 RNU6-208P-201ENST00000362431 107 ntBASIC1.63□□□□□ -2.15
ERVFC1P60507 Y_RNA.42-201ENST00000362660 108 ntBASIC1.63□□□□□ -2.15
ERVFC1P60507 Y_RNA.224-201ENST00000364308 111 ntBASIC1.63□□□□□ -2.15
ERVFC1P60507 RNU6-590P-201ENST00000365039 107 ntBASIC1.63□□□□□ -2.15
ERVFC1P60507 RNU6-934P-201ENST00000365154 107 ntBASIC1.63□□□□□ -2.15
ERVFC1P60507 MIR125B2-201ENST00000385128 89 ntBASIC1.63□□□□□ -2.15
ERVFC1P60507 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
ERVFC1P60507 AC097635.1-201ENST00000450678 155 ntBASIC1.63□□□□□ -2.15
ERVFC1P60507 RNU1-92P-201ENST00000517017 135 ntBASIC1.63□□□□□ -2.15
ERVFC1P60507 RNU6-303P-201ENST00000517091 106 ntBASIC1.63□□□□□ -2.15
ERVFC1P60507 MIR6504-201ENST00000613520 61 ntBASIC1.63□□□□□ -2.15
ERVFC1P60507 TRDV1-202ENST00000621643 102 ntBASIC1.63□□□□□ -2.15
ERVFC1P60507 RNU1-78P-201ENST00000391248 165 ntBASIC1.62□□□□□ -2.15
ERVFC1P60507 RNU6-448P-201ENST00000517052 107 ntBASIC1.62□□□□□ -2.15
ERVFC1P60507 YWHAEP2-201ENST00000580066 112 ntBASIC1.62□□□□□ -2.15
ERVFC1P60507 YWHAEP3-201ENST00000582767 121 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 199.1 ms