Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 Y_RNA.423-201ENST00000384057 113 ntBASIC0.11□□□□□ -2.39
PEX3P56589 Y_RNA.528-201ENST00000384575 108 ntBASIC0.11□□□□□ -2.39
PEX3P56589 RNA5SP299-201ENST00000391203 116 ntBASIC0.11□□□□□ -2.39
PEX3P56589 RNU6-257P-201ENST00000410238 98 ntBASIC0.11□□□□□ -2.39
PEX3P56589 RNU7-104P-201ENST00000459398 79 ntBASIC0.11□□□□□ -2.39
PEX3P56589 RNU6-1265P-201ENST00000516342 103 ntBASIC0.11□□□□□ -2.39
PEX3P56589 SNORA62.5-201ENST00000516634 120 ntBASIC0.11□□□□□ -2.39
PEX3P56589 AC023932.2-201ENST00000603176 175 ntBASIC0.11□□□□□ -2.39
PEX3P56589 Y_RNA.35-201ENST00000362601 101 ntBASIC0.1□□□□□ -2.39
PEX3P56589 RNU6-1260P-201ENST00000362944 107 ntBASIC0.1□□□□□ -2.39
PEX3P56589 SNORA2A-201ENST00000383885 135 ntBASIC0.1□□□□□ -2.39
PEX3P56589 RNU7-195P-201ENST00000458793 62 ntBASIC0.1□□□□□ -2.39
PEX3P56589 RNU6-1232P-201ENST00000516299 86 ntBASIC0.1□□□□□ -2.39
PEX3P56589 MIR330-201ENST00000362196 94 ntBASIC0.09□□□□□ -2.4
PEX3P56589 RNU6-1313P-201ENST00000362622 102 ntBASIC0.09□□□□□ -2.4
PEX3P56589 RNU6-235P-201ENST00000362644 107 ntBASIC0.09□□□□□ -2.4
PEX3P56589 Y_RNA.205-201ENST00000364128 113 ntBASIC0.09□□□□□ -2.4
PEX3P56589 RNA5SP128-201ENST00000365305 116 ntBASIC0.09□□□□□ -2.4
PEX3P56589 Y_RNA.344-201ENST00000365381 112 ntBASIC0.09□□□□□ -2.4
PEX3P56589 MIR760-201ENST00000390220 80 ntBASIC0.09□□□□□ -2.4
PEX3P56589 RNU6-127P-201ENST00000390897 107 ntBASIC0.09□□□□□ -2.4
PEX3P56589 RNU6-850P-201ENST00000516934 103 ntBASIC0.09□□□□□ -2.4
PEX3P56589 AC067863.3-201ENST00000624172 122 ntBASIC0.09□□□□□ -2.4
PEX3P56589 RNU6-363P-201ENST00000362895 105 ntBASIC0.08□□□□□ -2.4
PEX3P56589 Y_RNA.221-201ENST00000364248 96 ntBASIC0.08□□□□□ -2.4
PEX3P56589 RNU6-907P-201ENST00000390924 102 ntBASIC0.08□□□□□ -2.4
PEX3P56589 RNU6-269P-201ENST00000391077 97 ntBASIC0.08□□□□□ -2.4
PEX3P56589 MIR548H2-201ENST00000408874 88 ntBASIC0.08□□□□□ -2.4
PEX3P56589 RNU7-106P-201ENST00000459514 67 ntBASIC0.08□□□□□ -2.4
PEX3P56589 uc_338.28-201ENST00000612082 187 ntBASIC0.08□□□□□ -2.4
PEX3P56589 SNORA70.25-201ENST00000612741 95 ntBASIC0.08□□□□□ -2.4
PEX3P56589 RNU6-161P-201ENST00000363051 106 ntBASIC0.07□□□□□ -2.4
PEX3P56589 SNORD114-9-201ENST00000364370 72 ntBASIC0.07□□□□□ -2.4
PEX3P56589 Y_RNA.258-201ENST00000364613 105 ntBASIC0.07□□□□□ -2.4
PEX3P56589 Y_RNA.323-201ENST00000365157 109 ntBASIC0.07□□□□□ -2.4
PEX3P56589 Y_RNA.342-201ENST00000365352 113 ntBASIC0.07□□□□□ -2.4
PEX3P56589 SNORA40-201ENST00000388090 126 ntBASIC0.07□□□□□ -2.4
PEX3P56589 MIR501-201ENST00000390204 84 ntBASIC0.07□□□□□ -2.4
PEX3P56589 RNU6-772P-201ENST00000516042 105 ntBASIC0.07□□□□□ -2.4
PEX3P56589 Y_RNA.809-201ENST00000516058 95 ntBASIC0.07□□□□□ -2.4
PEX3P56589 RNU6-346P-201ENST00000516288 111 ntBASIC0.07□□□□□ -2.4
PEX3P56589 MIR5706-201ENST00000579841 80 ntBASIC0.07□□□□□ -2.4
PEX3P56589 MIR3920-201ENST00000581751 86 ntBASIC0.07□□□□□ -2.4
PEX3P56589 AC025166.1-201ENST00000612411 163 ntBASIC0.07□□□□□ -2.4
PEX3P56589 MTND5P18-201ENST00000445624 1801 ntBASIC0.06□□□□□ -2.4
PEX3P56589 Y_RNA.630-201ENST00000411370 108 ntBASIC0.06□□□□□ -2.4
PEX3P56589 RPL39P34-201ENST00000477141 156 ntBASIC0.06□□□□□ -2.4
PEX3P56589 RNU6-1018P-201ENST00000516577 106 ntBASIC0.06□□□□□ -2.4
PEX3P56589 MIR8087-201ENST00000612745 78 ntBASIC0.06□□□□□ -2.4
PEX3P56589 Y_RNA.247-201ENST00000364500 92 ntBASIC0.05□□□□□ -2.4
PEX3P56589 MIR759-201ENST00000390224 91 ntBASIC0.05□□□□□ -2.4
PEX3P56589 AC104408.1-201ENST00000605241 170 ntBASIC0.05□□□□□ -2.4
PEX3P56589 AC073869.9-201ENST00000641610 120 ntBASIC0.05□□□□□ -2.4
PEX3P56589 RNA5SP214-201ENST00000363378 118 ntBASIC0.04□□□□□ -2.4
PEX3P56589 Y_RNA.343-201ENST00000365354 112 ntBASIC0.04□□□□□ -2.4
PEX3P56589 SNORD38.2-201ENST00000384470 69 ntBASIC0.04□□□□□ -2.4
PEX3P56589 Y_RNA.586-201ENST00000391146 98 ntBASIC0.04□□□□□ -2.4
PEX3P56589 MIR548L-201ENST00000408303 86 ntBASIC0.04□□□□□ -2.4
PEX3P56589 MIR1197-201ENST00000408818 88 ntBASIC0.04□□□□□ -2.4
PEX3P56589 RNU7-129P-201ENST00000516128 62 ntBASIC0.04□□□□□ -2.4
PEX3P56589 MIR548AD-201ENST00000584780 82 ntBASIC0.04□□□□□ -2.4
PEX3P56589 MIR6779-201ENST00000617283 64 ntBASIC0.04□□□□□ -2.4
PEX3P56589 RNY4P6-201ENST00000363667 96 ntBASIC0.03□□□□□ -2.4
PEX3P56589 Y_RNA.173-201ENST00000363776 113 ntBASIC0.03□□□□□ -2.4
PEX3P56589 RNU6-1201P-201ENST00000384227 107 ntBASIC0.03□□□□□ -2.4
PEX3P56589 RNU6-524P-201ENST00000384270 107 ntBASIC0.03□□□□□ -2.4
PEX3P56589 MIR516A2-201ENST00000384888 90 ntBASIC0.03□□□□□ -2.4
PEX3P56589 MIR516A1-201ENST00000385033 90 ntBASIC0.03□□□□□ -2.4
PEX3P56589 MIR643-201ENST00000385267 97 ntBASIC0.03□□□□□ -2.4
PEX3P56589 SNORA7.5-201ENST00000410672 110 ntBASIC0.03□□□□□ -2.4
PEX3P56589 RNU6-1061P-201ENST00000516530 99 ntBASIC0.03□□□□□ -2.4
PEX3P56589 RNU6-782P-201ENST00000516852 104 ntBASIC0.03□□□□□ -2.4
PEX3P56589 RNA5SP330-201ENST00000517096 96 ntBASIC0.03□□□□□ -2.4
PEX3P56589 MTND5P40-201ENST00000559945 246 ntBASIC0.03□□□□□ -2.4
PEX3P56589 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.03□□□□□ -2.4
PEX3P56589 MIR499B-201ENST00000636498 73 ntBASIC0.03□□□□□ -2.4
PEX3P56589 SNORD114-5-201ENST00000362928 70 ntBASIC0.02□□□□□ -2.41
PEX3P56589 Y_RNA.85-201ENST00000363014 111 ntBASIC0.02□□□□□ -2.41
PEX3P56589 SNORD38.1-201ENST00000363863 68 ntBASIC0.02□□□□□ -2.41
PEX3P56589 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.02□□□□□ -2.41
PEX3P56589 MIR548AG2-201ENST00000581228 64 ntBASIC0.02□□□□□ -2.41
PEX3P56589 MIR4290-201ENST00000583807 95 ntBASIC0.02□□□□□ -2.41
PEX3P56589 MIR4743-201ENST00000584576 69 ntBASIC0.02□□□□□ -2.41
PEX3P56589 AL162726.3-218ENST00000636401 95 ntBASIC0.02□□□□□ -2.41
PEX3P56589 Y_RNA.346-201ENST00000365385 112 ntBASIC0.01□□□□□ -2.41
PEX3P56589 RNU6-209P-201ENST00000384118 107 ntBASIC0.01□□□□□ -2.41
PEX3P56589 RNU7-107P-201ENST00000459121 61 ntBASIC0.01□□□□□ -2.41
PEX3P56589 Y_RNA.712-201ENST00000517011 92 ntBASIC0.01□□□□□ -2.41
PEX3P56589 SNORD36A-201ENST00000362874 73 ntBASIC0□□□□□ -2.41
PEX3P56589 SNORD114-16-201ENST00000363044 70 ntBASIC0□□□□□ -2.41
PEX3P56589 MIR539-201ENST00000365690 78 ntBASIC0□□□□□ -2.41
PEX3P56589 RNU6-409P-201ENST00000384114 104 ntBASIC0□□□□□ -2.41
PEX3P56589 Y_RNA.525-201ENST00000384570 113 ntBASIC0□□□□□ -2.41
PEX3P56589 MIR548G-201ENST00000408442 89 ntBASIC0□□□□□ -2.41
PEX3P56589 RNA5SP484-201ENST00000458857 111 ntBASIC0□□□□□ -2.41
PEX3P56589 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0□□□□□ -2.41
PEX3P56589 RNU7-13P-201ENST00000516413 62 ntBASIC0□□□□□ -2.41
PEX3P56589 RNU6-971P-201ENST00000516920 106 ntBASIC0□□□□□ -2.41
PEX3P56589 MIR4679-2-201ENST00000578358 77 ntBASIC0□□□□□ -2.41
PEX3P56589 MIR4667-201ENST00000578933 66 ntBASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 265.8 ms