Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 Y_RNA.681-201ENST00000516445 113 ntBASIC0.2□□□□□ -2.38
EFNA3P52797 AC023932.2-201ENST00000603176 175 ntBASIC0.2□□□□□ -2.38
EFNA3P52797 Y_RNA.773-201ENST00000607168 90 ntBASIC0.2□□□□□ -2.38
EFNA3P52797 MIR2909-201ENST00000617113 69 ntBASIC0.2□□□□□ -2.38
EFNA3P52797 AL512310.12-203ENST00000640543 90 ntBASIC0.2□□□□□ -2.38
EFNA3P52797 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.2□□□□□ -2.38
EFNA3P52797 Y_RNA.507-201ENST00000384500 99 ntBASIC0.19□□□□□ -2.38
EFNA3P52797 MIR34C-201ENST00000384831 77 ntBASIC0.19□□□□□ -2.38
EFNA3P52797 MIR599-201ENST00000385069 95 ntBASIC0.19□□□□□ -2.38
EFNA3P52797 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.19□□□□□ -2.38
EFNA3P52797 RNU6-257P-201ENST00000410238 98 ntBASIC0.19□□□□□ -2.38
EFNA3P52797 SNORA7.5-201ENST00000410672 110 ntBASIC0.19□□□□□ -2.38
EFNA3P52797 AC097635.1-201ENST00000450678 155 ntBASIC0.19□□□□□ -2.38
EFNA3P52797 MTND5P40-201ENST00000559945 246 ntBASIC0.19□□□□□ -2.38
EFNA3P52797 MTND5P18-201ENST00000445624 1801 ntBASIC0.19□□□□□ -2.38
EFNA3P52797 RNU6-170P-201ENST00000362832 104 ntBASIC0.18□□□□□ -2.38
EFNA3P52797 RNU6-571P-201ENST00000384128 107 ntBASIC0.18□□□□□ -2.38
EFNA3P52797 MIR548I1-201ENST00000408810 149 ntBASIC0.18□□□□□ -2.38
EFNA3P52797 AC069271.1-201ENST00000445577 156 ntBASIC0.18□□□□□ -2.38
EFNA3P52797 RNU7-104P-201ENST00000459398 79 ntBASIC0.18□□□□□ -2.38
EFNA3P52797 TRAJ51-201ENST00000504127 63 ntBASIC0.18□□□□□ -2.38
EFNA3P52797 RNU6-1234P-201ENST00000516877 103 ntBASIC0.18□□□□□ -2.38
EFNA3P52797 AC067863.3-201ENST00000624172 122 ntBASIC0.18□□□□□ -2.38
EFNA3P52797 MIR1255B1-201ENST00000636325 63 ntBASIC0.18□□□□□ -2.38
EFNA3P52797 Y_RNA.155-201ENST00000363632 101 ntBASIC0.17□□□□□ -2.38
EFNA3P52797 Y_RNA.221-201ENST00000364248 96 ntBASIC0.17□□□□□ -2.38
EFNA3P52797 RNU6-1126P-201ENST00000384002 107 ntBASIC0.17□□□□□ -2.38
EFNA3P52797 Y_RNA.423-201ENST00000384057 113 ntBASIC0.17□□□□□ -2.38
EFNA3P52797 RNU6-815P-201ENST00000384080 113 ntBASIC0.17□□□□□ -2.38
EFNA3P52797 Y_RNA.433-201ENST00000384089 102 ntBASIC0.17□□□□□ -2.38
EFNA3P52797 RNU6-409P-201ENST00000384114 104 ntBASIC0.17□□□□□ -2.38
EFNA3P52797 RNA5SP63-201ENST00000391225 112 ntBASIC0.17□□□□□ -2.38
EFNA3P52797 RNU6-735P-201ENST00000410612 107 ntBASIC0.17□□□□□ -2.38
EFNA3P52797 SNORD63B-201ENST00000411005 70 ntBASIC0.17□□□□□ -2.38
EFNA3P52797 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.17□□□□□ -2.38
EFNA3P52797 RNU6-848P-201ENST00000515948 107 ntBASIC0.17□□□□□ -2.38
EFNA3P52797 RNU6-772P-201ENST00000516042 105 ntBASIC0.17□□□□□ -2.38
EFNA3P52797 RNU6-617P-201ENST00000516147 107 ntBASIC0.17□□□□□ -2.38
EFNA3P52797 RNU6-473P-201ENST00000516164 107 ntBASIC0.17□□□□□ -2.38
EFNA3P52797 RNU6-1049P-201ENST00000516414 107 ntBASIC0.17□□□□□ -2.38
EFNA3P52797 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.16□□□□□ -2.38
EFNA3P52797 AL157777.2-201ENST00000258070 137 ntBASIC0.16□□□□□ -2.38
EFNA3P52797 RNU6-363P-201ENST00000362895 105 ntBASIC0.16□□□□□ -2.38
EFNA3P52797 Y_RNA.809-201ENST00000516058 95 ntBASIC0.16□□□□□ -2.38
EFNA3P52797 Y_RNA.703-201ENST00000516846 111 ntBASIC0.16□□□□□ -2.38
EFNA3P52797 RNU7-161P-201ENST00000517289 62 ntBASIC0.16□□□□□ -2.38
EFNA3P52797 SNORA9.1-201ENST00000362412 131 ntBASIC0.15□□□□□ -2.39
EFNA3P52797 RNU6-726P-201ENST00000364680 107 ntBASIC0.15□□□□□ -2.39
EFNA3P52797 Y_RNA.342-201ENST00000365352 113 ntBASIC0.15□□□□□ -2.39
EFNA3P52797 MIR519A1-201ENST00000385257 85 ntBASIC0.15□□□□□ -2.39
EFNA3P52797 Y_RNA.586-201ENST00000391146 98 ntBASIC0.15□□□□□ -2.39
EFNA3P52797 SPINT5P-201ENST00000448174 155 ntBASIC0.15□□□□□ -2.39
EFNA3P52797 RNA5SP395-201ENST00000516567 118 ntBASIC0.15□□□□□ -2.39
EFNA3P52797 RNA5SP285-201ENST00000516619 119 ntBASIC0.15□□□□□ -2.39
EFNA3P52797 RNU6-971P-201ENST00000516920 106 ntBASIC0.15□□□□□ -2.39
EFNA3P52797 RNU6-850P-201ENST00000516934 103 ntBASIC0.15□□□□□ -2.39
EFNA3P52797 AC069113.3-201ENST00000521019 150 ntBASIC0.15□□□□□ -2.39
EFNA3P52797 MIR4315-1-201ENST00000636800 73 ntBASIC0.15□□□□□ -2.39
EFNA3P52797 MIR371B-201ENST00000638082 66 ntBASIC0.15□□□□□ -2.39
EFNA3P52797 MIR4315-2-201ENST00000640925 73 ntBASIC0.15□□□□□ -2.39
EFNA3P52797 RNU6-1313P-201ENST00000362622 102 ntBASIC0.14□□□□□ -2.39
EFNA3P52797 RNA5SP403-201ENST00000363598 108 ntBASIC0.14□□□□□ -2.39
EFNA3P52797 Y_RNA.344-201ENST00000365381 112 ntBASIC0.14□□□□□ -2.39
EFNA3P52797 SNORA2A-201ENST00000383885 135 ntBASIC0.14□□□□□ -2.39
EFNA3P52797 RNU6-80P-201ENST00000384195 107 ntBASIC0.14□□□□□ -2.39
EFNA3P52797 RNU6-816P-201ENST00000390914 107 ntBASIC0.14□□□□□ -2.39
EFNA3P52797 RNU6-1268P-201ENST00000391214 107 ntBASIC0.14□□□□□ -2.39
EFNA3P52797 RNU6-1239P-201ENST00000391310 107 ntBASIC0.14□□□□□ -2.39
EFNA3P52797 MIR1912-201ENST00000410389 80 ntBASIC0.14□□□□□ -2.39
EFNA3P52797 RNU7-195P-201ENST00000458793 62 ntBASIC0.14□□□□□ -2.39
EFNA3P52797 RNU7-129P-201ENST00000516128 62 ntBASIC0.14□□□□□ -2.39
EFNA3P52797 RNU6-1018P-201ENST00000516577 106 ntBASIC0.14□□□□□ -2.39
EFNA3P52797 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.14□□□□□ -2.39
EFNA3P52797 MIR3133-201ENST00000583157 78 ntBASIC0.14□□□□□ -2.39
EFNA3P52797 RNA5SP98-201ENST00000363158 137 ntBASIC0.13□□□□□ -2.39
EFNA3P52797 SNORD38.1-201ENST00000363863 68 ntBASIC0.13□□□□□ -2.39
EFNA3P52797 RNU6-1062P-201ENST00000383908 107 ntBASIC0.13□□□□□ -2.39
EFNA3P52797 RNU6-187P-201ENST00000384139 106 ntBASIC0.13□□□□□ -2.39
EFNA3P52797 MIR760-201ENST00000390220 80 ntBASIC0.13□□□□□ -2.39
EFNA3P52797 MIR1295A-201ENST00000408463 79 ntBASIC0.13□□□□□ -2.39
EFNA3P52797 RPL39P34-201ENST00000477141 156 ntBASIC0.13□□□□□ -2.39
EFNA3P52797 RNU6-90P-201ENST00000606352 106 ntBASIC0.13□□□□□ -2.39
EFNA3P52797 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.13□□□□□ -2.39
EFNA3P52797 AL162726.3-218ENST00000636401 95 ntBASIC0.13□□□□□ -2.39
EFNA3P52797 RNU6-1260P-201ENST00000362944 107 ntBASIC0.12□□□□□ -2.39
EFNA3P52797 Y_RNA.185-201ENST00000363894 100 ntBASIC0.12□□□□□ -2.39
EFNA3P52797 Y_RNA.362-201ENST00000365518 110 ntBASIC0.12□□□□□ -2.39
EFNA3P52797 RNU6-746P-201ENST00000384112 109 ntBASIC0.12□□□□□ -2.39
EFNA3P52797 RNU6-35P-201ENST00000384530 107 ntBASIC0.12□□□□□ -2.39
EFNA3P52797 RNA5SP299-201ENST00000391203 116 ntBASIC0.12□□□□□ -2.39
EFNA3P52797 Y_RNA.630-201ENST00000411370 108 ntBASIC0.12□□□□□ -2.39
EFNA3P52797 RNU7-107P-201ENST00000459121 61 ntBASIC0.12□□□□□ -2.39
EFNA3P52797 RNU7-13P-201ENST00000516413 62 ntBASIC0.12□□□□□ -2.39
EFNA3P52797 MIR4768-201ENST00000585270 74 ntBASIC0.12□□□□□ -2.39
EFNA3P52797 AC096720.1-201ENST00000604441 183 ntBASIC0.12□□□□□ -2.39
EFNA3P52797 U7.6-201ENST00000610841 64 ntBASIC0.12□□□□□ -2.39
EFNA3P52797 MIR6755-201ENST00000619993 66 ntBASIC0.12□□□□□ -2.39
EFNA3P52797 Y_RNA.309-201ENST00000365046 111 ntBASIC0.11□□□□□ -2.39
EFNA3P52797 SNORD50.2-201ENST00000365465 70 ntBASIC0.11□□□□□ -2.39
EFNA3P52797 RNU6-524P-201ENST00000384270 107 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 209 ms