Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 Y_RNA.13-201ENST00000362403 112 ntBASIC1.85□□□□□ -2.11
USP11P51784 MIR548U-201ENST00000390728 81 ntBASIC1.85□□□□□ -2.11
USP11P51784 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
USP11P51784 MIR4484-201ENST00000582855 83 ntBASIC1.85□□□□□ -2.11
USP11P51784 MIR6082-201ENST00000613604 109 ntBASIC1.85□□□□□ -2.11
USP11P51784 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.85□□□□□ -2.11
USP11P51784 MIR378A-201ENST00000362177 66 ntBASIC1.84□□□□□ -2.11
USP11P51784 MIR519A1-201ENST00000385257 85 ntBASIC1.84□□□□□ -2.11
USP11P51784 SNORD77.2-201ENST00000391045 68 ntBASIC1.84□□□□□ -2.11
USP11P51784 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.84□□□□□ -2.11
USP11P51784 snoU13.17-201ENST00000458802 104 ntBASIC1.84□□□□□ -2.11
USP11P51784 AC079140.2-201ENST00000506193 142 ntBASIC1.84□□□□□ -2.11
USP11P51784 AC114801.3-201ENST00000510231 177 ntBASIC1.84□□□□□ -2.11
USP11P51784 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.84□□□□□ -2.11
USP11P51784 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
USP11P51784 SNORA67.5-201ENST00000391036 107 ntBASIC1.83□□□□□ -2.12
USP11P51784 AC092628.1-201ENST00000436250 252 ntBASIC1.83□□□□□ -2.12
USP11P51784 AC036111.3-201ENST00000526389 112 ntBASIC1.83□□□□□ -2.12
USP11P51784 MIR3198-2-201ENST00000577868 80 ntBASIC1.83□□□□□ -2.12
USP11P51784 MIR3937-201ENST00000580135 106 ntBASIC1.83□□□□□ -2.12
USP11P51784 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.83□□□□□ -2.12
USP11P51784 snoU13.31-201ENST00000607291 104 ntBASIC1.83□□□□□ -2.12
USP11P51784 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.83□□□□□ -2.12
USP11P51784 MIR101-2-201ENST00000362195 79 ntBASIC1.82□□□□□ -2.12
USP11P51784 Y_RNA.56-201ENST00000362798 112 ntBASIC1.82□□□□□ -2.12
USP11P51784 SNORA25.9-201ENST00000365087 128 ntBASIC1.82□□□□□ -2.12
USP11P51784 AC048334.1-201ENST00000477975 159 ntBASIC1.82□□□□□ -2.12
USP11P51784 MIR548H5-201ENST00000580314 60 ntBASIC1.82□□□□□ -2.12
USP11P51784 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
USP11P51784 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
USP11P51784 RNU6-208P-201ENST00000362431 107 ntBASIC1.81□□□□□ -2.12
USP11P51784 RNU6-1260P-201ENST00000362944 107 ntBASIC1.81□□□□□ -2.12
USP11P51784 MIR1257-201ENST00000408490 117 ntBASIC1.81□□□□□ -2.12
USP11P51784 RNU6-1054P-201ENST00000411293 104 ntBASIC1.81□□□□□ -2.12
USP11P51784 AC008834.1-201ENST00000511612 175 ntBASIC1.81□□□□□ -2.12
USP11P51784 Y_RNA.809-201ENST00000516058 95 ntBASIC1.81□□□□□ -2.12
USP11P51784 RNU6-1015P-201ENST00000517121 99 ntBASIC1.81□□□□□ -2.12
USP11P51784 AL512310.8-201ENST00000550183 120 ntBASIC1.81□□□□□ -2.12
USP11P51784 TRDV1-202ENST00000621643 102 ntBASIC1.81□□□□□ -2.12
USP11P51784 MIR664A-201ENST00000626086 82 ntBASIC1.81□□□□□ -2.12
USP11P51784 SNORD113.3-201ENST00000364630 78 ntBASIC1.8□□□□□ -2.12
USP11P51784 RNU6-934P-201ENST00000365154 107 ntBASIC1.8□□□□□ -2.12
USP11P51784 Y_RNA.363-201ENST00000365529 113 ntBASIC1.8□□□□□ -2.12
USP11P51784 SNORA75.2-201ENST00000391138 150 ntBASIC1.8□□□□□ -2.12
USP11P51784 SNORA75.3-201ENST00000391231 150 ntBASIC1.8□□□□□ -2.12
USP11P51784 RNU6-380P-201ENST00000410207 107 ntBASIC1.8□□□□□ -2.12
USP11P51784 AC074348.1-201ENST00000426503 132 ntBASIC1.8□□□□□ -2.12
USP11P51784 Y_RNA.697-201ENST00000516776 113 ntBASIC1.8□□□□□ -2.12
USP11P51784 RNU6-448P-201ENST00000517052 107 ntBASIC1.8□□□□□ -2.12
USP11P51784 MIR4781-201ENST00000585250 76 ntBASIC1.8□□□□□ -2.12
USP11P51784 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.79□□□□□ -2.12
USP11P51784 Y_RNA.42-201ENST00000362660 108 ntBASIC1.79□□□□□ -2.12
USP11P51784 Y_RNA.330-201ENST00000365230 109 ntBASIC1.79□□□□□ -2.12
USP11P51784 RNU6-411P-201ENST00000384451 107 ntBASIC1.79□□□□□ -2.12
USP11P51784 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
USP11P51784 U6.100-201ENST00000636230 99 ntBASIC1.79□□□□□ -2.12
USP11P51784 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
USP11P51784 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
USP11P51784 Y_RNA.264-201ENST00000364665 102 ntBASIC1.78□□□□□ -2.12
USP11P51784 RNA5SP363-201ENST00000365072 115 ntBASIC1.78□□□□□ -2.12
USP11P51784 RNU6-1051P-201ENST00000365471 102 ntBASIC1.78□□□□□ -2.12
USP11P51784 MIR125B2-201ENST00000385128 89 ntBASIC1.78□□□□□ -2.12
USP11P51784 RNU6-687P-201ENST00000516443 89 ntBASIC1.78□□□□□ -2.12
USP11P51784 RNU6-765P-201ENST00000516916 99 ntBASIC1.78□□□□□ -2.12
USP11P51784 MIR4696-201ENST00000581431 70 ntBASIC1.78□□□□□ -2.12
USP11P51784 RNA5SP245-201ENST00000364239 121 ntBASIC1.77□□□□□ -2.13
USP11P51784 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
USP11P51784 RNU6-1065P-201ENST00000384513 106 ntBASIC1.77□□□□□ -2.13
USP11P51784 RNU6-997P-201ENST00000384725 107 ntBASIC1.77□□□□□ -2.13
USP11P51784 RNU6-70P-201ENST00000516438 60 ntBASIC1.77□□□□□ -2.13
USP11P51784 RNU6-303P-201ENST00000517091 106 ntBASIC1.77□□□□□ -2.13
USP11P51784 MIR4771-2-201ENST00000577758 74 ntBASIC1.77□□□□□ -2.13
USP11P51784 MIR4285-201ENST00000581001 85 ntBASIC1.77□□□□□ -2.13
USP11P51784 MIR4771-1-201ENST00000582617 74 ntBASIC1.77□□□□□ -2.13
USP11P51784 AL645939.4-201ENST00000604495 135 ntBASIC1.77□□□□□ -2.13
USP11P51784 RNU7-10P-201ENST00000607194 63 ntBASIC1.77□□□□□ -2.13
USP11P51784 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
USP11P51784 RNU6-664P-201ENST00000362381 107 ntBASIC1.76□□□□□ -2.13
USP11P51784 Y_RNA.12-201ENST00000362393 112 ntBASIC1.76□□□□□ -2.13
USP11P51784 SNORD33-201ENST00000362761 85 ntBASIC1.76□□□□□ -2.13
USP11P51784 MIR517C-201ENST00000385103 95 ntBASIC1.76□□□□□ -2.13
USP11P51784 RNU4-62P-201ENST00000410125 130 ntBASIC1.76□□□□□ -2.13
USP11P51784 RPS27P16-201ENST00000425758 201 ntBASIC1.76□□□□□ -2.13
USP11P51784 MIR3140-201ENST00000583685 90 ntBASIC1.76□□□□□ -2.13
USP11P51784 MTRNR2L2-201ENST00000604882 87 ntBASIC1.76□□□□□ -2.13
USP11P51784 MIR1297-201ENST00000637311 77 ntBASIC1.76□□□□□ -2.13
USP11P51784 Y_RNA.207-201ENST00000364142 106 ntBASIC1.75□□□□□ -2.13
USP11P51784 Y_RNA.226-201ENST00000364337 114 ntBASIC1.75□□□□□ -2.13
USP11P51784 AP1B1P2-201ENST00000416196 106 ntBASIC1.75□□□□□ -2.13
USP11P51784 RNU6-807P-201ENST00000516805 107 ntBASIC1.75□□□□□ -2.13
USP11P51784 RNU7-156P-201ENST00000517214 74 ntBASIC1.75□□□□□ -2.13
USP11P51784 SNORD53B-201ENST00000577887 78 ntBASIC1.75□□□□□ -2.13
USP11P51784 YWHAEP2-201ENST00000580066 112 ntBASIC1.75□□□□□ -2.13
USP11P51784 YWHAEP3-201ENST00000582767 121 ntBASIC1.75□□□□□ -2.13
USP11P51784 BX248123.2-201ENST00000606318 124 ntBASIC1.75□□□□□ -2.13
USP11P51784 ZNF209P-201ENST00000593450 2304 ntBASIC1.75□□□□□ -2.13
USP11P51784 MIR337-201ENST00000362281 93 ntBASIC1.74□□□□□ -2.13
USP11P51784 RNU6-369P-201ENST00000362515 102 ntBASIC1.74□□□□□ -2.13
USP11P51784 RNU6-330P-201ENST00000363015 107 ntBASIC1.74□□□□□ -2.13
USP11P51784 Y_RNA.239-201ENST00000364444 113 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 220.4 ms