Protein–RNA interactions for Protein: P48066

SLC6A11, Sodium- and chloride-dependent GABA transporter 3, humanhuman

Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A11P48066 MIR7-2-201ENST00000384970 110 ntBASIC1.44□□□□□ -2.18
SLC6A11P48066 Y_RNA.611-201ENST00000410682 108 ntBASIC1.44□□□□□ -2.18
SLC6A11P48066 RNU7-156P-201ENST00000517214 74 ntBASIC1.44□□□□□ -2.18
SLC6A11P48066 MIR4676-201ENST00000583078 72 ntBASIC1.44□□□□□ -2.18
SLC6A11P48066 AL353770.2-201ENST00000620024 78 ntBASIC1.44□□□□□ -2.18
SLC6A11P48066 MIR1245B-201ENST00000636115 69 ntBASIC1.44□□□□□ -2.18
SLC6A11P48066 RNU6-997P-201ENST00000384725 107 ntBASIC1.43□□□□□ -2.18
SLC6A11P48066 SNORD100-201ENST00000408573 76 ntBASIC1.43□□□□□ -2.18
SLC6A11P48066 MIR100-201ENST00000385259 80 ntBASIC1.42□□□□□ -2.18
SLC6A11P48066 MIR320A-201ENST00000385302 82 ntBASIC1.42□□□□□ -2.18
SLC6A11P48066 RNU6-243P-201ENST00000391140 107 ntBASIC1.42□□□□□ -2.18
SLC6A11P48066 RNU6-1254P-201ENST00000391266 104 ntBASIC1.42□□□□□ -2.18
SLC6A11P48066 SNORD63B-201ENST00000411005 70 ntBASIC1.42□□□□□ -2.18
SLC6A11P48066 RNA5SP220-201ENST00000516298 104 ntBASIC1.42□□□□□ -2.18
SLC6A11P48066 RNU6-977P-201ENST00000516411 103 ntBASIC1.42□□□□□ -2.18
SLC6A11P48066 Y_RNA.697-201ENST00000516776 113 ntBASIC1.42□□□□□ -2.18
SLC6A11P48066 MIR4452-201ENST00000583004 71 ntBASIC1.42□□□□□ -2.18
SLC6A11P48066 MIR6734-201ENST00000621166 68 ntBASIC1.42□□□□□ -2.18
SLC6A11P48066 Y_RNA.219-201ENST00000364232 113 ntBASIC1.41□□□□□ -2.18
SLC6A11P48066 MIR635-201ENST00000384830 98 ntBASIC1.41□□□□□ -2.18
SLC6A11P48066 MIR938-201ENST00000401216 83 ntBASIC1.41□□□□□ -2.18
SLC6A11P48066 AL161932.1-201ENST00000437408 146 ntBASIC1.41□□□□□ -2.18
SLC6A11P48066 AC067940.1-201ENST00000458411 300 ntBASIC1.41□□□□□ -2.18
SLC6A11P48066 AP003327.1-201ENST00000529684 127 ntBASIC1.41□□□□□ -2.18
SLC6A11P48066 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.41□□□□□ -2.18
SLC6A11P48066 RNA5SP327-201ENST00000362494 101 ntBASIC1.4□□□□□ -2.19
SLC6A11P48066 Y_RNA.42-201ENST00000362660 108 ntBASIC1.4□□□□□ -2.19
SLC6A11P48066 RNU6-509P-201ENST00000363519 107 ntBASIC1.4□□□□□ -2.19
SLC6A11P48066 Y_RNA.536-201ENST00000384621 113 ntBASIC1.4□□□□□ -2.19
SLC6A11P48066 RNU1-123P-201ENST00000458950 160 ntBASIC1.4□□□□□ -2.19
SLC6A11P48066 RNU7-106P-201ENST00000459514 67 ntBASIC1.4□□□□□ -2.19
SLC6A11P48066 MIR548H5-201ENST00000580314 60 ntBASIC1.4□□□□□ -2.19
SLC6A11P48066 MIR5588-201ENST00000581890 63 ntBASIC1.4□□□□□ -2.19
SLC6A11P48066 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.4□□□□□ -2.19
SLC6A11P48066 AC027335.2-201ENST00000624030 375 ntBASIC1.4□□□□□ -2.19
SLC6A11P48066 MIR1-1-201ENST00000362147 71 ntBASIC1.39□□□□□ -2.19
SLC6A11P48066 RNU6-633P-201ENST00000362612 103 ntBASIC1.39□□□□□ -2.19
SLC6A11P48066 RNU4-32P-201ENST00000363404 141 ntBASIC1.39□□□□□ -2.19
SLC6A11P48066 SNORD115-27-201ENST00000364430 82 ntBASIC1.39□□□□□ -2.19
SLC6A11P48066 RNU6-1276P-201ENST00000365372 104 ntBASIC1.39□□□□□ -2.19
SLC6A11P48066 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.39□□□□□ -2.19
SLC6A11P48066 snoU13.11-201ENST00000459219 104 ntBASIC1.39□□□□□ -2.19
SLC6A11P48066 Y_RNA.648-201ENST00000459455 110 ntBASIC1.39□□□□□ -2.19
SLC6A11P48066 TRAJ51-201ENST00000504127 63 ntBASIC1.39□□□□□ -2.19
SLC6A11P48066 RNU6-765P-201ENST00000516916 99 ntBASIC1.39□□□□□ -2.19
SLC6A11P48066 RNU7-10P-201ENST00000607194 63 ntBASIC1.39□□□□□ -2.19
SLC6A11P48066 MIR548BB-201ENST00000626714 66 ntBASIC1.39□□□□□ -2.19
SLC6A11P48066 SNORD36A-201ENST00000362874 73 ntBASIC1.38□□□□□ -2.19
SLC6A11P48066 RNU6-979P-201ENST00000383896 107 ntBASIC1.38□□□□□ -2.19
SLC6A11P48066 SNORA25-201ENST00000384384 134 ntBASIC1.38□□□□□ -2.19
SLC6A11P48066 SNORD12-201ENST00000391002 90 ntBASIC1.38□□□□□ -2.19
SLC6A11P48066 RNU7-195P-201ENST00000458793 62 ntBASIC1.38□□□□□ -2.19
SLC6A11P48066 RNU7-102P-201ENST00000458948 62 ntBASIC1.38□□□□□ -2.19
SLC6A11P48066 RNA5SP102-201ENST00000516865 106 ntBASIC1.38□□□□□ -2.19
SLC6A11P48066 RNU6-369P-201ENST00000362515 102 ntBASIC1.37□□□□□ -2.19
SLC6A11P48066 Y_RNA.56-201ENST00000362798 112 ntBASIC1.37□□□□□ -2.19
SLC6A11P48066 MIR520F-201ENST00000384824 87 ntBASIC1.37□□□□□ -2.19
SLC6A11P48066 RNU6-1275P-201ENST00000391087 107 ntBASIC1.37□□□□□ -2.19
SLC6A11P48066 RNU6-466P-201ENST00000391224 103 ntBASIC1.37□□□□□ -2.19
SLC6A11P48066 AC002429.1-201ENST00000437672 148 ntBASIC1.37□□□□□ -2.19
SLC6A11P48066 RPS29P23-201ENST00000458635 123 ntBASIC1.37□□□□□ -2.19
SLC6A11P48066 MIR4804-201ENST00000581683 73 ntBASIC1.37□□□□□ -2.19
SLC6A11P48066 SNORD92-201ENST00000585078 85 ntBASIC1.37□□□□□ -2.19
SLC6A11P48066 MIR6078-201ENST00000611069 100 ntBASIC1.37□□□□□ -2.19
SLC6A11P48066 Y_RNA.426-201ENST00000384068 113 ntBASIC1.36□□□□□ -2.19
SLC6A11P48066 RNU6-535P-201ENST00000384722 107 ntBASIC1.36□□□□□ -2.19
SLC6A11P48066 MIR519C-201ENST00000385053 87 ntBASIC1.36□□□□□ -2.19
SLC6A11P48066 SNORD78.1-201ENST00000390866 65 ntBASIC1.36□□□□□ -2.19
SLC6A11P48066 RNU1-119P-201ENST00000391122 165 ntBASIC1.36□□□□□ -2.19
SLC6A11P48066 AC092628.1-201ENST00000436250 252 ntBASIC1.36□□□□□ -2.19
SLC6A11P48066 RNU7-85P-201ENST00000458851 63 ntBASIC1.36□□□□□ -2.19
SLC6A11P48066 SNORD4B-201ENST00000459083 72 ntBASIC1.36□□□□□ -2.19
SLC6A11P48066 AC004223.1-201ENST00000479840 271 ntBASIC1.36□□□□□ -2.19
SLC6A11P48066 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.36□□□□□ -2.19
SLC6A11P48066 MIR3202-2-201ENST00000635980 79 ntBASIC1.36□□□□□ -2.19
SLC6A11P48066 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.36□□□□□ -2.19
SLC6A11P48066 RNU7-171P-201ENST00000459581 62 ntBASIC1.35□□□□□ -2.19
SLC6A11P48066 RNU6-65P-201ENST00000516332 98 ntBASIC1.35□□□□□ -2.19
SLC6A11P48066 RNA5SP61-201ENST00000516453 100 ntBASIC1.35□□□□□ -2.19
SLC6A11P48066 Y_RNA.685-201ENST00000516532 108 ntBASIC1.35□□□□□ -2.19
SLC6A11P48066 RNA5SP480-201ENST00000516840 109 ntBASIC1.35□□□□□ -2.19
SLC6A11P48066 RNU6-448P-201ENST00000517052 107 ntBASIC1.35□□□□□ -2.19
SLC6A11P48066 AC008608.1-201ENST00000603910 127 ntBASIC1.35□□□□□ -2.19
SLC6A11P48066 RMST_2.1-201ENST00000617263 136 ntBASIC1.35□□□□□ -2.19
SLC6A11P48066 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
SLC6A11P48066 MIR26B-201ENST00000362251 77 ntBASIC1.34□□□□□ -2.19
SLC6A11P48066 SNORD115-37-201ENST00000363768 82 ntBASIC1.34□□□□□ -2.19
SLC6A11P48066 RNU6-1124P-201ENST00000384169 107 ntBASIC1.34□□□□□ -2.19
SLC6A11P48066 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
SLC6A11P48066 Y_RNA.809-201ENST00000516058 95 ntBASIC1.34□□□□□ -2.19
SLC6A11P48066 MIR4536-1-201ENST00000583537 88 ntBASIC1.34□□□□□ -2.19
SLC6A11P48066 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
SLC6A11P48066 Y_RNA.283-201ENST00000364798 112 ntBASIC1.33□□□□□ -2.2
SLC6A11P48066 SNORA25.8-201ENST00000364831 128 ntBASIC1.33□□□□□ -2.2
SLC6A11P48066 RNU6-291P-201ENST00000384720 107 ntBASIC1.33□□□□□ -2.2
SLC6A11P48066 SNORA40.6-201ENST00000391153 128 ntBASIC1.33□□□□□ -2.2
SLC6A11P48066 MIR1827-201ENST00000408549 66 ntBASIC1.33□□□□□ -2.2
SLC6A11P48066 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.33□□□□□ -2.2
SLC6A11P48066 AC019288.1-201ENST00000557918 224 ntBASIC1.33□□□□□ -2.2
SLC6A11P48066 MIR3660-201ENST00000584845 100 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 213.1 ms