Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AC243829.6-201ENST00000612652 106 ntBASIC0.56□□□□□ -2.32
MTHFRP42898 uc_338.16-201ENST00000621804 95 ntBASIC0.56□□□□□ -2.32
MTHFRP42898 AP001362.1-201ENST00000625165 124 ntBASIC0.56□□□□□ -2.32
MTHFRP42898 Y_RNA.35-201ENST00000362601 101 ntBASIC0.55□□□□□ -2.32
MTHFRP42898 RNU4-58P-201ENST00000363192 141 ntBASIC0.55□□□□□ -2.32
MTHFRP42898 Y_RNA.178-201ENST00000363832 102 ntBASIC0.55□□□□□ -2.32
MTHFRP42898 RNU6-816P-201ENST00000390914 107 ntBASIC0.55□□□□□ -2.32
MTHFRP42898 RNU6-1268P-201ENST00000391214 107 ntBASIC0.55□□□□□ -2.32
MTHFRP42898 RNU6-1239P-201ENST00000391310 107 ntBASIC0.55□□□□□ -2.32
MTHFRP42898 SNORA7.5-201ENST00000410672 110 ntBASIC0.55□□□□□ -2.32
MTHFRP42898 RNU6-834P-201ENST00000362367 110 ntBASIC0.54□□□□□ -2.32
MTHFRP42898 Y_RNA.247-201ENST00000364500 92 ntBASIC0.54□□□□□ -2.32
MTHFRP42898 RNU6-865P-201ENST00000364772 107 ntBASIC0.54□□□□□ -2.32
MTHFRP42898 Y_RNA.360-201ENST00000365512 102 ntBASIC0.54□□□□□ -2.32
MTHFRP42898 SNORD116-21-201ENST00000384507 92 ntBASIC0.54□□□□□ -2.32
MTHFRP42898 RNU6-880P-201ENST00000384526 107 ntBASIC0.54□□□□□ -2.32
MTHFRP42898 Y_RNA.536-201ENST00000384621 113 ntBASIC0.54□□□□□ -2.32
MTHFRP42898 RNU6-1064P-201ENST00000410626 104 ntBASIC0.54□□□□□ -2.32
MTHFRP42898 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.54□□□□□ -2.32
MTHFRP42898 AC114737.2-201ENST00000421583 173 ntBASIC0.54□□□□□ -2.32
MTHFRP42898 SNORA63.5-201ENST00000363548 123 ntBASIC0.53□□□□□ -2.32
MTHFRP42898 RNA5SP245-201ENST00000364239 121 ntBASIC0.53□□□□□ -2.32
MTHFRP42898 U8.6-201ENST00000364939 135 ntBASIC0.53□□□□□ -2.32
MTHFRP42898 Y_RNA.323-201ENST00000365157 109 ntBASIC0.53□□□□□ -2.32
MTHFRP42898 VTRNA1-3-201ENST00000365645 89 ntBASIC0.53□□□□□ -2.32
MTHFRP42898 RNU6-409P-201ENST00000384114 104 ntBASIC0.53□□□□□ -2.32
MTHFRP42898 RNU6-1201P-201ENST00000384227 107 ntBASIC0.53□□□□□ -2.32
MTHFRP42898 MIR548I2-201ENST00000408348 149 ntBASIC0.53□□□□□ -2.32
MTHFRP42898 MIR1912-201ENST00000410389 80 ntBASIC0.53□□□□□ -2.32
MTHFRP42898 SNRPGP12-201ENST00000449481 213 ntBASIC0.53□□□□□ -2.32
MTHFRP42898 RN7SKP12-201ENST00000516275 143 ntBASIC0.53□□□□□ -2.32
MTHFRP42898 RNU6-1018P-201ENST00000516577 106 ntBASIC0.53□□□□□ -2.32
MTHFRP42898 SNORA31.14-201ENST00000516728 116 ntBASIC0.53□□□□□ -2.32
MTHFRP42898 Y_RNA.697-201ENST00000516776 113 ntBASIC0.53□□□□□ -2.32
MTHFRP42898 AC068339.1-201ENST00000526965 141 ntBASIC0.53□□□□□ -2.32
MTHFRP42898 DEFB131E-201ENST00000532329 154 ntBASIC0.53□□□□□ -2.32
MTHFRP42898 MIR6129-201ENST00000616087 109 ntBASIC0.53□□□□□ -2.32
MTHFRP42898 Y_RNA.309-201ENST00000365046 111 ntBASIC0.52□□□□□ -2.33
MTHFRP42898 RNU4-45P-201ENST00000365469 141 ntBASIC0.52□□□□□ -2.33
MTHFRP42898 MIR577-201ENST00000385196 96 ntBASIC0.52□□□□□ -2.33
MTHFRP42898 RNU6-589P-201ENST00000516485 107 ntBASIC0.52□□□□□ -2.33
MTHFRP42898 MIR5009-201ENST00000578736 100 ntBASIC0.52□□□□□ -2.33
MTHFRP42898 MIR4500-201ENST00000579472 76 ntBASIC0.52□□□□□ -2.33
MTHFRP42898 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.52□□□□□ -2.33
MTHFRP42898 Y_RNA.56-201ENST00000362798 112 ntBASIC0.51□□□□□ -2.33
MTHFRP42898 Y_RNA.155-201ENST00000363632 101 ntBASIC0.51□□□□□ -2.33
MTHFRP42898 SNORD18A-201ENST00000363753 72 ntBASIC0.51□□□□□ -2.33
MTHFRP42898 Y_RNA.273-201ENST00000364703 102 ntBASIC0.51□□□□□ -2.33
MTHFRP42898 Y_RNA.377-201ENST00000365644 108 ntBASIC0.51□□□□□ -2.33
MTHFRP42898 Y_RNA.507-201ENST00000384500 99 ntBASIC0.51□□□□□ -2.33
MTHFRP42898 RNU6-535P-201ENST00000384722 107 ntBASIC0.51□□□□□ -2.33
MTHFRP42898 AL157398.1-201ENST00000452981 186 ntBASIC0.51□□□□□ -2.33
MTHFRP42898 MIR4694-201ENST00000578534 80 ntBASIC0.51□□□□□ -2.33
MTHFRP42898 MIR3613-201ENST00000579844 87 ntBASIC0.51□□□□□ -2.33
MTHFRP42898 Y_RNA.291-201ENST00000364886 113 ntBASIC0.5□□□□□ -2.33
MTHFRP42898 RNU6-1056P-201ENST00000383996 107 ntBASIC0.5□□□□□ -2.33
MTHFRP42898 MIR644A-201ENST00000385262 94 ntBASIC0.5□□□□□ -2.33
MTHFRP42898 BX276092.1-201ENST00000427368 251 ntBASIC0.5□□□□□ -2.33
MTHFRP42898 RNU6-1290P-201ENST00000362957 109 ntBASIC0.49□□□□□ -2.33
MTHFRP42898 RNU6-1107P-201ENST00000364817 104 ntBASIC0.49□□□□□ -2.33
MTHFRP42898 RNA5SP117-201ENST00000365294 118 ntBASIC0.49□□□□□ -2.33
MTHFRP42898 RNU6-1014P-201ENST00000383940 103 ntBASIC0.49□□□□□ -2.33
MTHFRP42898 Y_RNA.433-201ENST00000384089 102 ntBASIC0.49□□□□□ -2.33
MTHFRP42898 RNU6-571P-201ENST00000384128 107 ntBASIC0.49□□□□□ -2.33
MTHFRP42898 SNORA50A-201ENST00000384225 134 ntBASIC0.49□□□□□ -2.33
MTHFRP42898 RNU6-1081P-201ENST00000384537 107 ntBASIC0.49□□□□□ -2.33
MTHFRP42898 Y_RNA.629-201ENST00000411368 105 ntBASIC0.49□□□□□ -2.33
MTHFRP42898 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.49□□□□□ -2.33
MTHFRP42898 AC244505.6-201ENST00000452829 130 ntBASIC0.49□□□□□ -2.33
MTHFRP42898 TRAJ51-201ENST00000504127 63 ntBASIC0.49□□□□□ -2.33
MTHFRP42898 MIR3678-201ENST00000578455 94 ntBASIC0.49□□□□□ -2.33
MTHFRP42898 AL442128.1-201ENST00000615151 90 ntBASIC0.49□□□□□ -2.33
MTHFRP42898 AL512310.12-203ENST00000640543 90 ntBASIC0.49□□□□□ -2.33
MTHFRP42898 RNY3P2-201ENST00000362918 102 ntBASIC0.48□□□□□ -2.33
MTHFRP42898 RNU6-832P-201ENST00000363319 107 ntBASIC0.48□□□□□ -2.33
MTHFRP42898 RNU6-1099P-201ENST00000363533 107 ntBASIC0.48□□□□□ -2.33
MTHFRP42898 Y_RNA.173-201ENST00000363776 113 ntBASIC0.48□□□□□ -2.33
MTHFRP42898 Y_RNA.174-201ENST00000363781 105 ntBASIC0.48□□□□□ -2.33
MTHFRP42898 SNORD38.1-201ENST00000363863 68 ntBASIC0.48□□□□□ -2.33
MTHFRP42898 MIR519A1-201ENST00000385257 85 ntBASIC0.48□□□□□ -2.33
MTHFRP42898 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.48□□□□□ -2.33
MTHFRP42898 SNORA62.5-201ENST00000516634 120 ntBASIC0.48□□□□□ -2.33
MTHFRP42898 RNU6-850P-201ENST00000516934 103 ntBASIC0.48□□□□□ -2.33
MTHFRP42898 Y_RNA.709-201ENST00000516952 92 ntBASIC0.48□□□□□ -2.33
MTHFRP42898 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.48□□□□□ -2.33
MTHFRP42898 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.48□□□□□ -2.33
MTHFRP42898 MIR101-2-201ENST00000362195 79 ntBASIC0.47□□□□□ -2.33
MTHFRP42898 Y_RNA.49-201ENST00000362714 112 ntBASIC0.47□□□□□ -2.33
MTHFRP42898 SNORA36.1-201ENST00000363424 132 ntBASIC0.47□□□□□ -2.33
MTHFRP42898 MIR548G-201ENST00000408442 89 ntBASIC0.47□□□□□ -2.33
MTHFRP42898 RNA5SP94-201ENST00000516917 108 ntBASIC0.47□□□□□ -2.33
MTHFRP42898 MIR548H5-201ENST00000580314 60 ntBASIC0.47□□□□□ -2.33
MTHFRP42898 AC092634.7-201ENST00000621022 103 ntBASIC0.47□□□□□ -2.33
MTHFRP42898 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
MTHFRP42898 RNU6-170P-201ENST00000362832 104 ntBASIC0.46□□□□□ -2.34
MTHFRP42898 RNA5SP62-201ENST00000363457 110 ntBASIC0.46□□□□□ -2.34
MTHFRP42898 RNU6-215P-201ENST00000365169 102 ntBASIC0.46□□□□□ -2.34
MTHFRP42898 RNU6-106P-201ENST00000384405 107 ntBASIC0.46□□□□□ -2.34
MTHFRP42898 RNY4P18-201ENST00000391107 89 ntBASIC0.46□□□□□ -2.34
MTHFRP42898 SNORD63B-201ENST00000411005 70 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 179.8 ms