Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 SNORA50A-201ENST00000384225 134 ntBASIC0.4□□□□□ -2.35
CHRNA3P32297 MIR1912-201ENST00000410389 80 ntBASIC0.4□□□□□ -2.35
CHRNA3P32297 DEFB131E-201ENST00000532329 154 ntBASIC0.4□□□□□ -2.35
CHRNA3P32297 MIR4639-201ENST00000584938 69 ntBASIC0.4□□□□□ -2.35
CHRNA3P32297 AC132825.6-201ENST00000638861 357 ntBASIC0.4□□□□□ -2.35
CHRNA3P32297 MIR101-2-201ENST00000362195 79 ntBASIC0.39□□□□□ -2.35
CHRNA3P32297 RNY1P8-201ENST00000383970 114 ntBASIC0.39□□□□□ -2.35
CHRNA3P32297 Y_RNA.507-201ENST00000384500 99 ntBASIC0.39□□□□□ -2.35
CHRNA3P32297 Y_RNA.525-201ENST00000384570 113 ntBASIC0.39□□□□□ -2.35
CHRNA3P32297 MIR34C-201ENST00000384831 77 ntBASIC0.39□□□□□ -2.35
CHRNA3P32297 RNU6-679P-201ENST00000391003 106 ntBASIC0.39□□□□□ -2.35
CHRNA3P32297 SNRPGP12-201ENST00000449481 213 ntBASIC0.39□□□□□ -2.35
CHRNA3P32297 RNU6-1333P-201ENST00000516162 93 ntBASIC0.39□□□□□ -2.35
CHRNA3P32297 SNORD33.1-201ENST00000516213 88 ntBASIC0.39□□□□□ -2.35
CHRNA3P32297 RNU6-469P-201ENST00000516253 101 ntBASIC0.39□□□□□ -2.35
CHRNA3P32297 RNA5SP47-201ENST00000517230 109 ntBASIC0.39□□□□□ -2.35
CHRNA3P32297 AC007012.1-201ENST00000567192 175 ntBASIC0.39□□□□□ -2.35
CHRNA3P32297 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.39□□□□□ -2.35
CHRNA3P32297 RNU6-834P-201ENST00000362367 110 ntBASIC0.38□□□□□ -2.35
CHRNA3P32297 SNORD38.2-201ENST00000384470 69 ntBASIC0.38□□□□□ -2.35
CHRNA3P32297 AC097635.1-201ENST00000450678 155 ntBASIC0.38□□□□□ -2.35
CHRNA3P32297 Y_RNA.649-201ENST00000459077 103 ntBASIC0.38□□□□□ -2.35
CHRNA3P32297 RNU6-479P-201ENST00000516348 105 ntBASIC0.38□□□□□ -2.35
CHRNA3P32297 SCARNA16.5-201ENST00000517114 183 ntBASIC0.38□□□□□ -2.35
CHRNA3P32297 AC138869.1-201ENST00000568623 124 ntBASIC0.38□□□□□ -2.35
CHRNA3P32297 AL670379.3-201ENST00000605040 251 ntBASIC0.38□□□□□ -2.35
CHRNA3P32297 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.38□□□□□ -2.35
CHRNA3P32297 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
CHRNA3P32297 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
CHRNA3P32297 AC090625.1-201ENST00000357130 210 ntBASIC0.37□□□□□ -2.35
CHRNA3P32297 SNORA36.1-201ENST00000363424 132 ntBASIC0.37□□□□□ -2.35
CHRNA3P32297 RNA5SP245-201ENST00000364239 121 ntBASIC0.37□□□□□ -2.35
CHRNA3P32297 RNA5SP205-201ENST00000364653 136 ntBASIC0.37□□□□□ -2.35
CHRNA3P32297 Y_RNA.281-201ENST00000364774 94 ntBASIC0.37□□□□□ -2.35
CHRNA3P32297 Y_RNA.309-201ENST00000365046 111 ntBASIC0.37□□□□□ -2.35
CHRNA3P32297 RNU6-409P-201ENST00000384114 104 ntBASIC0.37□□□□□ -2.35
CHRNA3P32297 RNU6-22P-201ENST00000384355 107 ntBASIC0.37□□□□□ -2.35
CHRNA3P32297 RNU6-1117P-201ENST00000384525 104 ntBASIC0.37□□□□□ -2.35
CHRNA3P32297 SNORD28-201ENST00000384706 75 ntBASIC0.37□□□□□ -2.35
CHRNA3P32297 MIR644A-201ENST00000385262 94 ntBASIC0.37□□□□□ -2.35
CHRNA3P32297 RNU6-1168P-201ENST00000390831 104 ntBASIC0.37□□□□□ -2.35
CHRNA3P32297 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.37□□□□□ -2.35
CHRNA3P32297 AC092634.7-201ENST00000621022 103 ntBASIC0.37□□□□□ -2.35
CHRNA3P32297 AL035470.1-201ENST00000622571 220 ntBASIC0.37□□□□□ -2.35
CHRNA3P32297 SNORD118-201ENST00000363593 134 ntBASIC0.36□□□□□ -2.35
CHRNA3P32297 SNORD38.1-201ENST00000363863 68 ntBASIC0.36□□□□□ -2.35
CHRNA3P32297 RNA5SP517-201ENST00000364724 117 ntBASIC0.36□□□□□ -2.35
CHRNA3P32297 RNU6-1201P-201ENST00000384227 107 ntBASIC0.36□□□□□ -2.35
CHRNA3P32297 SNORA8.2-201ENST00000384372 139 ntBASIC0.36□□□□□ -2.35
CHRNA3P32297 MIR635-201ENST00000384830 98 ntBASIC0.36□□□□□ -2.35
CHRNA3P32297 RNU6-816P-201ENST00000390914 107 ntBASIC0.36□□□□□ -2.35
CHRNA3P32297 RNU6-1268P-201ENST00000391214 107 ntBASIC0.36□□□□□ -2.35
CHRNA3P32297 RNA5SP63-201ENST00000391225 112 ntBASIC0.36□□□□□ -2.35
CHRNA3P32297 RNU6-1239P-201ENST00000391310 107 ntBASIC0.36□□□□□ -2.35
CHRNA3P32297 SNORA40.8-201ENST00000411034 126 ntBASIC0.36□□□□□ -2.35
CHRNA3P32297 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.36□□□□□ -2.35
CHRNA3P32297 SNORA68.3-201ENST00000515906 83 ntBASIC0.36□□□□□ -2.35
CHRNA3P32297 RNU6-406P-201ENST00000516470 107 ntBASIC0.36□□□□□ -2.35
CHRNA3P32297 MIR4694-201ENST00000578534 80 ntBASIC0.36□□□□□ -2.35
CHRNA3P32297 MIR4500-201ENST00000579472 76 ntBASIC0.36□□□□□ -2.35
CHRNA3P32297 AC023932.2-201ENST00000603176 175 ntBASIC0.36□□□□□ -2.35
CHRNA3P32297 MIRLET7D-201ENST00000362263 87 ntBASIC0.35□□□□□ -2.35
CHRNA3P32297 RNU6-170P-201ENST00000362832 104 ntBASIC0.35□□□□□ -2.35
CHRNA3P32297 RNU6-880P-201ENST00000384526 107 ntBASIC0.35□□□□□ -2.35
CHRNA3P32297 Y_RNA.567-201ENST00000384736 106 ntBASIC0.35□□□□□ -2.35
CHRNA3P32297 MIR548A3-201ENST00000385297 97 ntBASIC0.35□□□□□ -2.35
CHRNA3P32297 TRAJ51-201ENST00000504127 63 ntBASIC0.35□□□□□ -2.35
CHRNA3P32297 RNU6-863P-201ENST00000515989 104 ntBASIC0.35□□□□□ -2.35
CHRNA3P32297 MIR2909-201ENST00000617113 69 ntBASIC0.35□□□□□ -2.35
CHRNA3P32297 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.34□□□□□ -2.35
CHRNA3P32297 Y_RNA.35-201ENST00000362601 101 ntBASIC0.34□□□□□ -2.36
CHRNA3P32297 RNU6-1260P-201ENST00000362944 107 ntBASIC0.34□□□□□ -2.36
CHRNA3P32297 SNORA63.5-201ENST00000363548 123 ntBASIC0.34□□□□□ -2.36
CHRNA3P32297 RNA5SP403-201ENST00000363598 108 ntBASIC0.34□□□□□ -2.36
CHRNA3P32297 Y_RNA.173-201ENST00000363776 113 ntBASIC0.34□□□□□ -2.36
CHRNA3P32297 Y_RNA.323-201ENST00000365157 109 ntBASIC0.34□□□□□ -2.36
CHRNA3P32297 Y_RNA.342-201ENST00000365352 113 ntBASIC0.34□□□□□ -2.36
CHRNA3P32297 MIR518A1-201ENST00000385068 85 ntBASIC0.34□□□□□ -2.36
CHRNA3P32297 SNORA7.5-201ENST00000410672 110 ntBASIC0.34□□□□□ -2.36
CHRNA3P32297 RNU6-62P-201ENST00000516526 102 ntBASIC0.34□□□□□ -2.36
CHRNA3P32297 RNU6-789P-201ENST00000517105 102 ntBASIC0.34□□□□□ -2.36
CHRNA3P32297 MIR4514-201ENST00000581410 57 ntBASIC0.34□□□□□ -2.36
CHRNA3P32297 AL365222.1-201ENST00000614661 98 ntBASIC0.34□□□□□ -2.36
CHRNA3P32297 AL442128.1-201ENST00000615151 90 ntBASIC0.34□□□□□ -2.36
CHRNA3P32297 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.34□□□□□ -2.36
CHRNA3P32297 Y_RNA.49-201ENST00000362714 112 ntBASIC0.33□□□□□ -2.36
CHRNA3P32297 Y_RNA.155-201ENST00000363632 101 ntBASIC0.33□□□□□ -2.36
CHRNA3P32297 RNU6-1229P-201ENST00000364295 107 ntBASIC0.33□□□□□ -2.36
CHRNA3P32297 Y_RNA.261-201ENST00000364631 102 ntBASIC0.33□□□□□ -2.36
CHRNA3P32297 BX276092.1-201ENST00000427368 251 ntBASIC0.33□□□□□ -2.36
CHRNA3P32297 RNU6-848P-201ENST00000515948 107 ntBASIC0.33□□□□□ -2.36
CHRNA3P32297 RNU6-617P-201ENST00000516147 107 ntBASIC0.33□□□□□ -2.36
CHRNA3P32297 RNU6-473P-201ENST00000516164 107 ntBASIC0.33□□□□□ -2.36
CHRNA3P32297 RNU6-1049P-201ENST00000516414 107 ntBASIC0.33□□□□□ -2.36
CHRNA3P32297 RNA5SP268-201ENST00000516828 124 ntBASIC0.33□□□□□ -2.36
CHRNA3P32297 RNU6-850P-201ENST00000516934 103 ntBASIC0.33□□□□□ -2.36
CHRNA3P32297 AC068339.1-201ENST00000526965 141 ntBASIC0.33□□□□□ -2.36
CHRNA3P32297 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.33□□□□□ -2.36
CHRNA3P32297 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.33□□□□□ -2.36
CHRNA3P32297 AC091304.10-201ENST00000641554 121 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 194.7 ms