Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 RNU6-235P-201ENST00000362644 107 ntBASIC-1.2□□□□□ -2.6
CD40LGP29965 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.2□□□□□ -2.6
CD40LGP29965 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.2□□□□□ -2.6
CD40LGP29965 RNU6-647P-201ENST00000364243 107 ntBASIC-1.2□□□□□ -2.6
CD40LGP29965 SNORD115-22-201ENST00000364456 82 ntBASIC-1.2□□□□□ -2.6
CD40LGP29965 MIR624-201ENST00000385217 97 ntBASIC-1.2□□□□□ -2.6
CD40LGP29965 MIR1302-11-201ENST00000408051 138 ntBASIC-1.2□□□□□ -2.6
CD40LGP29965 MIR1302-9-201ENST00000408365 138 ntBASIC-1.2□□□□□ -2.6
CD40LGP29965 MIR1302-10-201ENST00000408734 138 ntBASIC-1.2□□□□□ -2.6
CD40LGP29965 SNORD116-25-201ENST00000516517 92 ntBASIC-1.2□□□□□ -2.6
CD40LGP29965 RNA5SP476-201ENST00000516613 103 ntBASIC-1.2□□□□□ -2.6
CD40LGP29965 MIR4308-201ENST00000580634 81 ntBASIC-1.2□□□□□ -2.6
CD40LGP29965 YWHAEP3-201ENST00000582767 121 ntBASIC-1.2□□□□□ -2.6
CD40LGP29965 MIR1302-2-201ENST00000607096 138 ntBASIC-1.2□□□□□ -2.6
CD40LGP29965 AC091912.2-201ENST00000624798 167 ntBASIC-1.2□□□□□ -2.6
CD40LGP29965 RNU6-978P-201ENST00000364371 103 ntBASIC-1.21□□□□□ -2.6
CD40LGP29965 RNU6-728P-201ENST00000365375 104 ntBASIC-1.21□□□□□ -2.6
CD40LGP29965 RNU6-1289P-201ENST00000384431 106 ntBASIC-1.21□□□□□ -2.6
CD40LGP29965 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.21□□□□□ -2.6
CD40LGP29965 RNU4-43P-201ENST00000410628 137 ntBASIC-1.21□□□□□ -2.6
CD40LGP29965 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.21□□□□□ -2.6
CD40LGP29965 RNU7-2P-201ENST00000516096 62 ntBASIC-1.21□□□□□ -2.6
CD40LGP29965 RNU6-277P-201ENST00000516272 106 ntBASIC-1.21□□□□□ -2.6
CD40LGP29965 MIR4520-1-201ENST00000582609 70 ntBASIC-1.21□□□□□ -2.6
CD40LGP29965 AC080013.6-201ENST00000606185 215 ntBASIC-1.21□□□□□ -2.6
CD40LGP29965 AC090574.1-201ENST00000623186 233 ntBASIC-1.21□□□□□ -2.6
CD40LGP29965 MIR6874-201ENST00000635894 71 ntBASIC-1.21□□□□□ -2.6
CD40LGP29965 Y_RNA.31-201ENST00000362574 102 ntBASIC-1.22□□□□□ -2.6
CD40LGP29965 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.22□□□□□ -2.6
CD40LGP29965 RNU4-32P-201ENST00000363404 141 ntBASIC-1.22□□□□□ -2.6
CD40LGP29965 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.22□□□□□ -2.6
CD40LGP29965 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.22□□□□□ -2.6
CD40LGP29965 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.22□□□□□ -2.6
CD40LGP29965 MT-TL1-201ENST00000386347 75 ntBASIC-1.22□□□□□ -2.6
CD40LGP29965 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.22□□□□□ -2.6
CD40LGP29965 AL589823.1-201ENST00000429577 183 ntBASIC-1.22□□□□□ -2.6
CD40LGP29965 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.22□□□□□ -2.6
CD40LGP29965 HAR1A.1-201ENST00000459583 118 ntBASIC-1.22□□□□□ -2.6
CD40LGP29965 AC073869.6-201ENST00000640656 341 ntBASIC-1.22□□□□□ -2.6
CD40LGP29965 Y_RNA.357-201ENST00000365487 109 ntBASIC-1.23□□□□□ -2.61
CD40LGP29965 Y_RNA.384-201ENST00000383909 102 ntBASIC-1.23□□□□□ -2.61
CD40LGP29965 RNU6-616P-201ENST00000384353 107 ntBASIC-1.23□□□□□ -2.61
CD40LGP29965 RNU4-69P-201ENST00000410677 143 ntBASIC-1.23□□□□□ -2.61
CD40LGP29965 RNU6-976P-201ENST00000516086 111 ntBASIC-1.23□□□□□ -2.61
CD40LGP29965 RNA5SP236-201ENST00000516169 116 ntBASIC-1.23□□□□□ -2.61
CD40LGP29965 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.23□□□□□ -2.61
CD40LGP29965 AL353803.5-201ENST00000599815 141 ntBASIC-1.23□□□□□ -2.61
CD40LGP29965 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.23□□□□□ -2.61
CD40LGP29965 RNU6-664P-201ENST00000362381 107 ntBASIC-1.24□□□□□ -2.61
CD40LGP29965 SNORA2.1-201ENST00000363089 137 ntBASIC-1.24□□□□□ -2.61
CD40LGP29965 RNU6-623P-201ENST00000363143 105 ntBASIC-1.24□□□□□ -2.61
CD40LGP29965 Y_RNA.117-201ENST00000363294 101 ntBASIC-1.24□□□□□ -2.61
CD40LGP29965 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.24□□□□□ -2.61
CD40LGP29965 SNORA62.4-201ENST00000365504 151 ntBASIC-1.24□□□□□ -2.61
CD40LGP29965 SNORA63.7-201ENST00000365579 123 ntBASIC-1.24□□□□□ -2.61
CD40LGP29965 Y_RNA.571-201ENST00000384753 98 ntBASIC-1.24□□□□□ -2.61
CD40LGP29965 RNU6-466P-201ENST00000391224 103 ntBASIC-1.24□□□□□ -2.61
CD40LGP29965 RNU6-876P-201ENST00000391295 104 ntBASIC-1.24□□□□□ -2.61
CD40LGP29965 AC138393.2-201ENST00000414742 246 ntBASIC-1.24□□□□□ -2.61
CD40LGP29965 RNU6-412P-201ENST00000516434 106 ntBASIC-1.24□□□□□ -2.61
CD40LGP29965 MIR4770-201ENST00000579149 58 ntBASIC-1.24□□□□□ -2.61
CD40LGP29965 SNORD27-201ENST00000363981 72 ntBASIC-1.25□□□□□ -2.61
CD40LGP29965 RNU6-990P-201ENST00000364385 104 ntBASIC-1.25□□□□□ -2.61
CD40LGP29965 SNORA63.6-201ENST00000364921 119 ntBASIC-1.25□□□□□ -2.61
CD40LGP29965 Y_RNA.299-201ENST00000364973 94 ntBASIC-1.25□□□□□ -2.61
CD40LGP29965 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.25□□□□□ -2.61
CD40LGP29965 SNORD101-201ENST00000384027 73 ntBASIC-1.25□□□□□ -2.61
CD40LGP29965 Y_RNA.497-201ENST00000384447 98 ntBASIC-1.25□□□□□ -2.61
CD40LGP29965 SNORA26.4-201ENST00000391188 123 ntBASIC-1.25□□□□□ -2.61
CD40LGP29965 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.25□□□□□ -2.61
CD40LGP29965 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1.25□□□□□ -2.61
CD40LGP29965 MIR4320-201ENST00000636981 65 ntBASIC-1.25□□□□□ -2.61
CD40LGP29965 Y_RNA.16-201ENST00000362421 102 ntBASIC-1.26□□□□□ -2.61
CD40LGP29965 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.26□□□□□ -2.61
CD40LGP29965 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.26□□□□□ -2.61
CD40LGP29965 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.26□□□□□ -2.61
CD40LGP29965 RNU7-123P-201ENST00000515911 60 ntBASIC-1.26□□□□□ -2.61
CD40LGP29965 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.26□□□□□ -2.61
CD40LGP29965 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.26□□□□□ -2.61
CD40LGP29965 AP002795.1-201ENST00000534879 84 ntBASIC-1.26□□□□□ -2.61
CD40LGP29965 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-1.26□□□□□ -2.61
CD40LGP29965 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.27□□□□□ -2.61
CD40LGP29965 Y_RNA.142-201ENST00000363491 102 ntBASIC-1.27□□□□□ -2.61
CD40LGP29965 Y_RNA.263-201ENST00000364659 114 ntBASIC-1.27□□□□□ -2.61
CD40LGP29965 Y_RNA.275-201ENST00000364726 110 ntBASIC-1.27□□□□□ -2.61
CD40LGP29965 RNU6-690P-201ENST00000365242 106 ntBASIC-1.27□□□□□ -2.61
CD40LGP29965 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.27□□□□□ -2.61
CD40LGP29965 RNU6-576P-201ENST00000390854 102 ntBASIC-1.27□□□□□ -2.61
CD40LGP29965 RNA5SP86-201ENST00000390869 98 ntBASIC-1.27□□□□□ -2.61
CD40LGP29965 RNU6-243P-201ENST00000391140 107 ntBASIC-1.27□□□□□ -2.61
CD40LGP29965 RNU6-381P-201ENST00000391259 108 ntBASIC-1.27□□□□□ -2.61
CD40LGP29965 SNORD57-201ENST00000448188 72 ntBASIC-1.27□□□□□ -2.61
CD40LGP29965 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.28□□□□□ -2.61
CD40LGP29965 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.28□□□□□ -2.61
CD40LGP29965 SNORD115-33-201ENST00000363723 82 ntBASIC-1.28□□□□□ -2.61
CD40LGP29965 RNU6-540P-201ENST00000384622 101 ntBASIC-1.28□□□□□ -2.61
CD40LGP29965 MIR451A-201ENST00000385059 72 ntBASIC-1.28□□□□□ -2.61
CD40LGP29965 RNU6-935P-201ENST00000410371 100 ntBASIC-1.28□□□□□ -2.61
CD40LGP29965 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-1.28□□□□□ -2.61
CD40LGP29965 Y_RNA.632-201ENST00000459189 102 ntBASIC-1.28□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 216.5 ms