Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 MIR3613-201ENST00000579844 87 ntBASIC1.02□□□□□ -2.25
VAMP1P23763 Y_RNA.221-201ENST00000364248 96 ntBASIC1.01□□□□□ -2.25
VAMP1P23763 RNU6-813P-201ENST00000384691 107 ntBASIC1.01□□□□□ -2.25
VAMP1P23763 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.01□□□□□ -2.25
VAMP1P23763 MIR4639-201ENST00000584938 69 ntBASIC1.01□□□□□ -2.25
VAMP1P23763 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1□□□□□ -2.25
VAMP1P23763 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
VAMP1P23763 RNU6-1187P-201ENST00000364771 110 ntBASIC1□□□□□ -2.25
VAMP1P23763 MIR181B2-201ENST00000385004 89 ntBASIC1□□□□□ -2.25
VAMP1P23763 AC004223.1-201ENST00000479840 271 ntBASIC1□□□□□ -2.25
VAMP1P23763 AC091304.10-201ENST00000641554 121 ntBASIC1□□□□□ -2.25
VAMP1P23763 RNU6-32P-201ENST00000383948 107 ntBASIC0.99□□□□□ -2.25
VAMP1P23763 RNU6-13P-201ENST00000384248 107 ntBASIC0.99□□□□□ -2.25
VAMP1P23763 RNU6-12P-201ENST00000384604 107 ntBASIC0.99□□□□□ -2.25
VAMP1P23763 RNU6-41P-201ENST00000384741 107 ntBASIC0.99□□□□□ -2.25
VAMP1P23763 SNORA17.3-201ENST00000391159 129 ntBASIC0.99□□□□□ -2.25
VAMP1P23763 AC244505.6-201ENST00000452829 130 ntBASIC0.99□□□□□ -2.25
VAMP1P23763 RNU6-109P-201ENST00000516364 107 ntBASIC0.99□□□□□ -2.25
VAMP1P23763 RNU6-184P-201ENST00000516514 107 ntBASIC0.99□□□□□ -2.25
VAMP1P23763 Y_RNA.705-201ENST00000516862 110 ntBASIC0.99□□□□□ -2.25
VAMP1P23763 AC012531.4-201ENST00000616509 177 ntBASIC0.99□□□□□ -2.25
VAMP1P23763 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.99□□□□□ -2.25
VAMP1P23763 AC092634.7-201ENST00000621022 103 ntBASIC0.99□□□□□ -2.25
VAMP1P23763 Y_RNA.467-201ENST00000384297 102 ntBASIC0.98□□□□□ -2.25
VAMP1P23763 SNORD13-201ENST00000459299 104 ntBASIC0.98□□□□□ -2.25
VAMP1P23763 Y_RNA.93-201ENST00000363066 109 ntBASIC0.97□□□□□ -2.25
VAMP1P23763 RNU6-1244P-201ENST00000363614 108 ntBASIC0.97□□□□□ -2.25
VAMP1P23763 SNORD18A-201ENST00000363753 72 ntBASIC0.97□□□□□ -2.25
VAMP1P23763 MIR519A1-201ENST00000385257 85 ntBASIC0.97□□□□□ -2.25
VAMP1P23763 SNORA40.6-201ENST00000391153 128 ntBASIC0.97□□□□□ -2.25
VAMP1P23763 RNA5SP247-201ENST00000411181 105 ntBASIC0.97□□□□□ -2.25
VAMP1P23763 SNORD71-201ENST00000411292 86 ntBASIC0.97□□□□□ -2.25
VAMP1P23763 AC108667.1-201ENST00000428618 249 ntBASIC0.97□□□□□ -2.25
VAMP1P23763 RNU7-104P-201ENST00000459398 79 ntBASIC0.97□□□□□ -2.25
VAMP1P23763 RNU7-106P-201ENST00000459514 67 ntBASIC0.97□□□□□ -2.25
VAMP1P23763 RPL39P28-201ENST00000465655 155 ntBASIC0.97□□□□□ -2.25
VAMP1P23763 TRMT112P2-201ENST00000512910 132 ntBASIC0.97□□□□□ -2.25
VAMP1P23763 AL590095.2-201ENST00000604136 117 ntBASIC0.97□□□□□ -2.25
VAMP1P23763 MIR2052-201ENST00000636055 55 ntBASIC0.97□□□□□ -2.25
VAMP1P23763 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.97□□□□□ -2.25
VAMP1P23763 Y_RNA.81-201ENST00000362997 102 ntBASIC0.96□□□□□ -2.26
VAMP1P23763 SNORA7.1-201ENST00000363750 139 ntBASIC0.96□□□□□ -2.26
VAMP1P23763 RNY1P8-201ENST00000383970 114 ntBASIC0.96□□□□□ -2.26
VAMP1P23763 RNU6-524P-201ENST00000384270 107 ntBASIC0.96□□□□□ -2.26
VAMP1P23763 RNU6-972P-201ENST00000391208 107 ntBASIC0.96□□□□□ -2.26
VAMP1P23763 RNU6-466P-201ENST00000391224 103 ntBASIC0.96□□□□□ -2.26
VAMP1P23763 RNA5SP227-201ENST00000516184 113 ntBASIC0.96□□□□□ -2.26
VAMP1P23763 RNA5SP94-201ENST00000516917 108 ntBASIC0.96□□□□□ -2.26
VAMP1P23763 AC103810.7-201ENST00000607821 91 ntBASIC0.96□□□□□ -2.26
VAMP1P23763 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.96□□□□□ -2.26
VAMP1P23763 AC244669.1-204ENST00000621564 178 ntBASIC0.96□□□□□ -2.26
VAMP1P23763 RNU6-1260P-201ENST00000362944 107 ntBASIC0.95□□□□□ -2.26
VAMP1P23763 RNU6-537P-201ENST00000517277 103 ntBASIC0.95□□□□□ -2.26
VAMP1P23763 MIR4653-201ENST00000585107 83 ntBASIC0.95□□□□□ -2.26
VAMP1P23763 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
VAMP1P23763 Y_RNA.4-201ENST00000362333 112 ntBASIC0.94□□□□□ -2.26
VAMP1P23763 SNORA25.9-201ENST00000365087 128 ntBASIC0.94□□□□□ -2.26
VAMP1P23763 RNU6-147P-201ENST00000383983 107 ntBASIC0.94□□□□□ -2.26
VAMP1P23763 SNORD28-201ENST00000384706 75 ntBASIC0.94□□□□□ -2.26
VAMP1P23763 MIR3660-201ENST00000584845 100 ntBASIC0.94□□□□□ -2.26
VAMP1P23763 AC103810.9-201ENST00000606688 112 ntBASIC0.94□□□□□ -2.26
VAMP1P23763 MIR499A-201ENST00000384903 122 ntBASIC0.93□□□□□ -2.26
VAMP1P23763 AP1B1P2-201ENST00000416196 106 ntBASIC0.93□□□□□ -2.26
VAMP1P23763 AL606490.4-201ENST00000423117 127 ntBASIC0.93□□□□□ -2.26
VAMP1P23763 SNORA40.13-201ENST00000516379 120 ntBASIC0.93□□□□□ -2.26
VAMP1P23763 MIR4777-201ENST00000583710 86 ntBASIC0.93□□□□□ -2.26
VAMP1P23763 AC067863.3-201ENST00000624172 122 ntBASIC0.93□□□□□ -2.26
VAMP1P23763 Y_RNA.495-201ENST00000384435 112 ntBASIC0.92□□□□□ -2.26
VAMP1P23763 RNU6-887P-201ENST00000410660 100 ntBASIC0.92□□□□□ -2.26
VAMP1P23763 RNU6-321P-201ENST00000410912 106 ntBASIC0.92□□□□□ -2.26
VAMP1P23763 SCARNA16.5-201ENST00000517114 183 ntBASIC0.92□□□□□ -2.26
VAMP1P23763 MIR548Z-201ENST00000584743 97 ntBASIC0.92□□□□□ -2.26
VAMP1P23763 MIR518E-201ENST00000385252 88 ntBASIC0.91□□□□□ -2.26
VAMP1P23763 MIR1287-201ENST00000408492 90 ntBASIC0.91□□□□□ -2.26
VAMP1P23763 RNU7-61P-201ENST00000515897 61 ntBASIC0.91□□□□□ -2.26
VAMP1P23763 RNU7-13P-201ENST00000516413 62 ntBASIC0.91□□□□□ -2.26
VAMP1P23763 MIR6078-201ENST00000611069 100 ntBASIC0.91□□□□□ -2.26
VAMP1P23763 AC025521.1-201ENST00000621624 286 ntBASIC0.91□□□□□ -2.26
VAMP1P23763 SNORD36A-201ENST00000362874 73 ntBASIC0.9□□□□□ -2.27
VAMP1P23763 RNU6-644P-201ENST00000391155 98 ntBASIC0.9□□□□□ -2.27
VAMP1P23763 RNA5SP268-201ENST00000516828 124 ntBASIC0.9□□□□□ -2.27
VAMP1P23763 RNA5SP47-201ENST00000517230 109 ntBASIC0.9□□□□□ -2.27
VAMP1P23763 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
VAMP1P23763 Y_RNA.164-201ENST00000363709 102 ntBASIC0.89□□□□□ -2.27
VAMP1P23763 RNU6-392P-201ENST00000364926 101 ntBASIC0.89□□□□□ -2.27
VAMP1P23763 Y_RNA.327-201ENST00000365201 102 ntBASIC0.89□□□□□ -2.27
VAMP1P23763 RNU6-716P-201ENST00000365621 103 ntBASIC0.89□□□□□ -2.27
VAMP1P23763 RNA5SP121-201ENST00000516537 101 ntBASIC0.89□□□□□ -2.27
VAMP1P23763 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.89□□□□□ -2.27
VAMP1P23763 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
VAMP1P23763 Y_RNA.226-201ENST00000364337 114 ntBASIC0.88□□□□□ -2.27
VAMP1P23763 AL513043.2-201ENST00000573941 143 ntBASIC0.88□□□□□ -2.27
VAMP1P23763 MIR4421-201ENST00000578133 69 ntBASIC0.88□□□□□ -2.27
VAMP1P23763 MIR4295-201ENST00000585286 85 ntBASIC0.88□□□□□ -2.27
VAMP1P23763 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.88□□□□□ -2.27
VAMP1P23763 RNU7-95P-201ENST00000459222 64 ntBASIC0.87□□□□□ -2.27
VAMP1P23763 RNU6-65P-201ENST00000516332 98 ntBASIC0.87□□□□□ -2.27
VAMP1P23763 Y_RNA.677-201ENST00000516401 85 ntBASIC0.87□□□□□ -2.27
VAMP1P23763 MIR4303-201ENST00000581299 66 ntBASIC0.87□□□□□ -2.27
VAMP1P23763 RNU6-945P-201ENST00000383947 107 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 262.3 ms