Protein–RNA interactions for Protein: P19793

RXRA, Retinoic acid receptor RXR-alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRAP19793 HSBP1P2-201ENST00000299671 229 ntBASIC0.77□□□□□ -2.29
RXRAP19793 RNU6-766P-201ENST00000362478 107 ntBASIC0.77□□□□□ -2.29
RXRAP19793 Y_RNA.78-201ENST00000362970 110 ntBASIC0.77□□□□□ -2.29
RXRAP19793 SNORD38.1-201ENST00000363863 68 ntBASIC0.77□□□□□ -2.29
RXRAP19793 RNU6-153P-201ENST00000364422 104 ntBASIC0.77□□□□□ -2.29
RXRAP19793 Y_RNA.247-201ENST00000364500 92 ntBASIC0.77□□□□□ -2.29
RXRAP19793 RNU6-147P-201ENST00000383983 107 ntBASIC0.77□□□□□ -2.29
RXRAP19793 RNU6-1113P-201ENST00000384348 107 ntBASIC0.77□□□□□ -2.29
RXRAP19793 RNU7-102P-201ENST00000458948 62 ntBASIC0.77□□□□□ -2.29
RXRAP19793 RNU6-904P-201ENST00000516206 101 ntBASIC0.77□□□□□ -2.29
RXRAP19793 RNU6-531P-201ENST00000516694 104 ntBASIC0.77□□□□□ -2.29
RXRAP19793 Y_RNA.42-201ENST00000362660 108 ntBASIC0.76□□□□□ -2.29
RXRAP19793 RNU4-58P-201ENST00000363192 141 ntBASIC0.76□□□□□ -2.29
RXRAP19793 RNU4-45P-201ENST00000365469 141 ntBASIC0.76□□□□□ -2.29
RXRAP19793 SNORD38.2-201ENST00000384470 69 ntBASIC0.76□□□□□ -2.29
RXRAP19793 MIR590-201ENST00000385008 97 ntBASIC0.76□□□□□ -2.29
RXRAP19793 MIR216A-201ENST00000385063 110 ntBASIC0.76□□□□□ -2.29
RXRAP19793 Y_RNA.659-201ENST00000515994 113 ntBASIC0.76□□□□□ -2.29
RXRAP19793 AC138907.6-201ENST00000568401 126 ntBASIC0.76□□□□□ -2.29
RXRAP19793 MIR4500-201ENST00000579472 76 ntBASIC0.76□□□□□ -2.29
RXRAP19793 MIR3613-201ENST00000579844 87 ntBASIC0.76□□□□□ -2.29
RXRAP19793 AC096720.1-201ENST00000604441 183 ntBASIC0.76□□□□□ -2.29
RXRAP19793 PVT1_3.1-201ENST00000620853 95 ntBASIC0.76□□□□□ -2.29
RXRAP19793 Y_RNA.10-201ENST00000362371 110 ntBASIC0.75□□□□□ -2.29
RXRAP19793 SNORD100-201ENST00000408573 76 ntBASIC0.75□□□□□ -2.29
RXRAP19793 RNU6-765P-201ENST00000516916 99 ntBASIC0.75□□□□□ -2.29
RXRAP19793 AC008608.1-201ENST00000603910 127 ntBASIC0.75□□□□□ -2.29
RXRAP19793 SPINT5P-201ENST00000448174 155 ntBASIC0.74□□□□□ -2.29
RXRAP19793 RNU6-1194P-201ENST00000516208 104 ntBASIC0.74□□□□□ -2.29
RXRAP19793 RNU6-537P-201ENST00000517277 103 ntBASIC0.74□□□□□ -2.29
RXRAP19793 MTND5P40-201ENST00000559945 246 ntBASIC0.74□□□□□ -2.29
RXRAP19793 SNORD45B-201ENST00000364617 72 ntBASIC0.73□□□□□ -2.29
RXRAP19793 RNU6-32P-201ENST00000383948 107 ntBASIC0.73□□□□□ -2.29
RXRAP19793 RNU6-13P-201ENST00000384248 107 ntBASIC0.73□□□□□ -2.29
RXRAP19793 RNU6-12P-201ENST00000384604 107 ntBASIC0.73□□□□□ -2.29
RXRAP19793 Y_RNA.540-201ENST00000384638 111 ntBASIC0.73□□□□□ -2.29
RXRAP19793 RNU6-41P-201ENST00000384741 107 ntBASIC0.73□□□□□ -2.29
RXRAP19793 MIR548G-201ENST00000408442 89 ntBASIC0.73□□□□□ -2.29
RXRAP19793 Y_RNA.601-201ENST00000410500 113 ntBASIC0.73□□□□□ -2.29
RXRAP19793 BX276092.1-201ENST00000427368 251 ntBASIC0.73□□□□□ -2.29
RXRAP19793 SNRPGP12-201ENST00000449481 213 ntBASIC0.73□□□□□ -2.29
RXRAP19793 SCARNA23-201ENST00000516060 130 ntBASIC0.73□□□□□ -2.29
RXRAP19793 RNU6-109P-201ENST00000516364 107 ntBASIC0.73□□□□□ -2.29
RXRAP19793 RNU6-184P-201ENST00000516514 107 ntBASIC0.73□□□□□ -2.29
RXRAP19793 RN7SL793P-201ENST00000583259 296 ntBASIC0.73□□□□□ -2.29
RXRAP19793 AL590095.2-201ENST00000604136 117 ntBASIC0.73□□□□□ -2.29
RXRAP19793 Y_RNA.818-201ENST00000618813 71 ntBASIC0.73□□□□□ -2.29
RXRAP19793 MIR101-2-201ENST00000362195 79 ntBASIC0.72□□□□□ -2.29
RXRAP19793 RNY1P4-201ENST00000384595 115 ntBASIC0.72□□□□□ -2.29
RXRAP19793 Y_RNA.544-201ENST00000384650 113 ntBASIC0.72□□□□□ -2.29
RXRAP19793 MTATP6P29-201ENST00000415057 132 ntBASIC0.72□□□□□ -2.29
RXRAP19793 RNU6-795P-201ENST00000516323 103 ntBASIC0.72□□□□□ -2.29
RXRAP19793 Y_RNA.697-201ENST00000516776 113 ntBASIC0.72□□□□□ -2.29
RXRAP19793 AP003327.1-201ENST00000529684 127 ntBASIC0.72□□□□□ -2.29
RXRAP19793 MIR3612-201ENST00000579753 87 ntBASIC0.72□□□□□ -2.29
RXRAP19793 RNU6-90P-201ENST00000606352 106 ntBASIC0.72□□□□□ -2.29
RXRAP19793 AC091304.10-201ENST00000641554 121 ntBASIC0.72□□□□□ -2.29
RXRAP19793 MIR18A-201ENST00000362310 71 ntBASIC0.71□□□□□ -2.3
RXRAP19793 RNU6-170P-201ENST00000362832 104 ntBASIC0.71□□□□□ -2.3
RXRAP19793 Y_RNA.95-201ENST00000363079 95 ntBASIC0.71□□□□□ -2.3
RXRAP19793 Y_RNA.107-201ENST00000363190 121 ntBASIC0.71□□□□□ -2.3
RXRAP19793 RNU6-571P-201ENST00000384128 107 ntBASIC0.71□□□□□ -2.3
RXRAP19793 Y_RNA.495-201ENST00000384435 112 ntBASIC0.71□□□□□ -2.3
RXRAP19793 RNA5SP222-201ENST00000411039 105 ntBASIC0.71□□□□□ -2.3
RXRAP19793 AC109327.2-201ENST00000448339 378 ntBASIC0.71□□□□□ -2.3
RXRAP19793 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.71□□□□□ -2.3
RXRAP19793 AC002350.1-201ENST00000490759 375 ntBASIC0.71□□□□□ -2.3
RXRAP19793 RNU6-448P-201ENST00000517052 107 ntBASIC0.71□□□□□ -2.3
RXRAP19793 MIR548Z-201ENST00000584743 97 ntBASIC0.71□□□□□ -2.3
RXRAP19793 AC012531.4-201ENST00000616509 177 ntBASIC0.71□□□□□ -2.3
RXRAP19793 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.71□□□□□ -2.3
RXRAP19793 MIR6779-201ENST00000617283 64 ntBASIC0.71□□□□□ -2.3
RXRAP19793 Y_RNA.173-201ENST00000363776 113 ntBASIC0.7□□□□□ -2.3
RXRAP19793 RNA5SP499-201ENST00000363982 119 ntBASIC0.7□□□□□ -2.3
RXRAP19793 Y_RNA.205-201ENST00000364128 113 ntBASIC0.7□□□□□ -2.3
RXRAP19793 RNU6-1163P-201ENST00000364516 107 ntBASIC0.7□□□□□ -2.3
RXRAP19793 Y_RNA.567-201ENST00000384736 106 ntBASIC0.7□□□□□ -2.3
RXRAP19793 RNA5SP436-201ENST00000516020 115 ntBASIC0.7□□□□□ -2.3
RXRAP19793 RNU6-850P-201ENST00000516934 103 ntBASIC0.7□□□□□ -2.3
RXRAP19793 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.7□□□□□ -2.3
RXRAP19793 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
RXRAP19793 Y_RNA.536-201ENST00000384621 113 ntBASIC0.69□□□□□ -2.3
RXRAP19793 RNU6-291P-201ENST00000384720 107 ntBASIC0.69□□□□□ -2.3
RXRAP19793 RNU6-535P-201ENST00000384722 107 ntBASIC0.69□□□□□ -2.3
RXRAP19793 RNU6-168P-201ENST00000516189 101 ntBASIC0.69□□□□□ -2.3
RXRAP19793 MIR4777-201ENST00000583710 86 ntBASIC0.69□□□□□ -2.3
RXRAP19793 MIR4439-201ENST00000583746 80 ntBASIC0.69□□□□□ -2.3
RXRAP19793 Y_RNA.56-201ENST00000362798 112 ntBASIC0.68□□□□□ -2.3
RXRAP19793 Y_RNA.93-201ENST00000363066 109 ntBASIC0.68□□□□□ -2.3
RXRAP19793 RNU6-1244P-201ENST00000363614 108 ntBASIC0.68□□□□□ -2.3
RXRAP19793 Y_RNA.467-201ENST00000384297 102 ntBASIC0.68□□□□□ -2.3
RXRAP19793 RNA5SP89-201ENST00000410300 108 ntBASIC0.68□□□□□ -2.3
RXRAP19793 RNU6-158P-201ENST00000517104 100 ntBASIC0.68□□□□□ -2.3
RXRAP19793 MIR548H5-201ENST00000580314 60 ntBASIC0.68□□□□□ -2.3
RXRAP19793 RNU7-10P-201ENST00000607194 63 ntBASIC0.68□□□□□ -2.3
RXRAP19793 AP001318.4-201ENST00000616637 121 ntBASIC0.68□□□□□ -2.3
RXRAP19793 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
RXRAP19793 Y_RNA.32-201ENST00000362589 110 ntBASIC0.67□□□□□ -2.3
RXRAP19793 Y_RNA.57-201ENST00000362806 113 ntBASIC0.67□□□□□ -2.3
RXRAP19793 RNU6-813P-201ENST00000384691 107 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 265.2 ms