Protein–RNA interactions for Protein: P19438

TNFRSF1A, Tumor necrosis factor receptor superfamily member 1A, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1AP19438 MIR8053-201ENST00000613344 75 ntBASIC1.64□□□□□ -2.15
TNFRSF1AP19438 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.64□□□□□ -2.15
TNFRSF1AP19438 AC103706.3-201ENST00000636297 85 ntBASIC1.64□□□□□ -2.15
TNFRSF1AP19438 SNORA25.3-201ENST00000363205 127 ntBASIC1.63□□□□□ -2.15
TNFRSF1AP19438 RNU6-824P-201ENST00000363724 104 ntBASIC1.63□□□□□ -2.15
TNFRSF1AP19438 RNU6-669P-201ENST00000365575 107 ntBASIC1.63□□□□□ -2.15
TNFRSF1AP19438 Y_RNA.536-201ENST00000384621 113 ntBASIC1.63□□□□□ -2.15
TNFRSF1AP19438 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.63□□□□□ -2.15
TNFRSF1AP19438 MIR1289-2-201ENST00000408360 111 ntBASIC1.63□□□□□ -2.15
TNFRSF1AP19438 snoU13.9-201ENST00000458927 103 ntBASIC1.63□□□□□ -2.15
TNFRSF1AP19438 MIR4285-201ENST00000581001 85 ntBASIC1.63□□□□□ -2.15
TNFRSF1AP19438 MIR4696-201ENST00000581431 70 ntBASIC1.63□□□□□ -2.15
TNFRSF1AP19438 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
TNFRSF1AP19438 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
TNFRSF1AP19438 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.63□□□□□ -2.15
TNFRSF1AP19438 U6.100-201ENST00000636230 99 ntBASIC1.63□□□□□ -2.15
TNFRSF1AP19438 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
TNFRSF1AP19438 RNU6-664P-201ENST00000362381 107 ntBASIC1.62□□□□□ -2.15
TNFRSF1AP19438 RNU6-1216P-201ENST00000362590 107 ntBASIC1.62□□□□□ -2.15
TNFRSF1AP19438 SNORD113.1-201ENST00000363280 73 ntBASIC1.62□□□□□ -2.15
TNFRSF1AP19438 SNORD101-201ENST00000384027 73 ntBASIC1.62□□□□□ -2.15
TNFRSF1AP19438 SNORA24B-201ENST00000384176 131 ntBASIC1.62□□□□□ -2.15
TNFRSF1AP19438 RNU6-614P-201ENST00000384369 107 ntBASIC1.62□□□□□ -2.15
TNFRSF1AP19438 MIR519A1-201ENST00000385257 85 ntBASIC1.62□□□□□ -2.15
TNFRSF1AP19438 RNU6-604P-201ENST00000390917 100 ntBASIC1.62□□□□□ -2.15
TNFRSF1AP19438 AC110620.1-201ENST00000416042 228 ntBASIC1.62□□□□□ -2.15
TNFRSF1AP19438 U6.59-201ENST00000615686 107 ntBASIC1.62□□□□□ -2.15
TNFRSF1AP19438 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.62□□□□□ -2.15
TNFRSF1AP19438 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.62□□□□□ -2.15
TNFRSF1AP19438 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
TNFRSF1AP19438 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.61□□□□□ -2.15
TNFRSF1AP19438 RNU6-1260P-201ENST00000362944 107 ntBASIC1.61□□□□□ -2.15
TNFRSF1AP19438 MT-TN-201ENST00000387400 73 ntBASIC1.61□□□□□ -2.15
TNFRSF1AP19438 RPL30P7-201ENST00000479312 323 ntBASIC1.61□□□□□ -2.15
TNFRSF1AP19438 AC097510.1-201ENST00000510945 133 ntBASIC1.61□□□□□ -2.15
TNFRSF1AP19438 Y_RNA.809-201ENST00000516058 95 ntBASIC1.61□□□□□ -2.15
TNFRSF1AP19438 RNU6-977P-201ENST00000516411 103 ntBASIC1.61□□□□□ -2.15
TNFRSF1AP19438 RNU6-922P-201ENST00000516753 99 ntBASIC1.61□□□□□ -2.15
TNFRSF1AP19438 AC015688.6-201ENST00000577737 104 ntBASIC1.61□□□□□ -2.15
TNFRSF1AP19438 MIR4422-201ENST00000581938 83 ntBASIC1.61□□□□□ -2.15
TNFRSF1AP19438 AC012493.3-201ENST00000604494 112 ntBASIC1.61□□□□□ -2.15
TNFRSF1AP19438 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.61□□□□□ -2.15
TNFRSF1AP19438 AL109933.3-201ENST00000619095 188 ntBASIC1.61□□□□□ -2.15
TNFRSF1AP19438 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.61□□□□□ -2.15
TNFRSF1AP19438 RNA5SP259-201ENST00000365541 109 ntBASIC1.6□□□□□ -2.15
TNFRSF1AP19438 MIR513A1-201ENST00000385138 129 ntBASIC1.6□□□□□ -2.15
TNFRSF1AP19438 SNORD93-201ENST00000408813 74 ntBASIC1.6□□□□□ -2.15
TNFRSF1AP19438 RNA5SP338-201ENST00000410495 85 ntBASIC1.6□□□□□ -2.15
TNFRSF1AP19438 AL591806.2-201ENST00000433122 173 ntBASIC1.6□□□□□ -2.15
TNFRSF1AP19438 snoU13.23-201ENST00000458863 104 ntBASIC1.6□□□□□ -2.15
TNFRSF1AP19438 snoU13.25-201ENST00000458945 104 ntBASIC1.6□□□□□ -2.15
TNFRSF1AP19438 MIR2115-201ENST00000516657 100 ntBASIC1.6□□□□□ -2.15
TNFRSF1AP19438 RNA5SP364-201ENST00000516938 78 ntBASIC1.6□□□□□ -2.15
TNFRSF1AP19438 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.6□□□□□ -2.15
TNFRSF1AP19438 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.15
TNFRSF1AP19438 MIR101-2-201ENST00000362195 79 ntBASIC1.59□□□□□ -2.15
TNFRSF1AP19438 MIR302D-201ENST00000362275 68 ntBASIC1.59□□□□□ -2.15
TNFRSF1AP19438 RNU6-403P-201ENST00000363163 104 ntBASIC1.59□□□□□ -2.15
TNFRSF1AP19438 MIR764-201ENST00000390811 85 ntBASIC1.59□□□□□ -2.15
TNFRSF1AP19438 AC108210.2-201ENST00000503681 201 ntBASIC1.59□□□□□ -2.15
TNFRSF1AP19438 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.59□□□□□ -2.15
TNFRSF1AP19438 AC013244.2-201ENST00000603396 103 ntBASIC1.59□□□□□ -2.15
TNFRSF1AP19438 MTRNR2L2-201ENST00000604882 87 ntBASIC1.59□□□□□ -2.15
TNFRSF1AP19438 MIR8063-201ENST00000621930 81 ntBASIC1.59□□□□□ -2.15
TNFRSF1AP19438 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
TNFRSF1AP19438 RNU1-36P-201ENST00000365130 165 ntBASIC1.58□□□□□ -2.16
TNFRSF1AP19438 SNORA40.6-201ENST00000391153 128 ntBASIC1.58□□□□□ -2.16
TNFRSF1AP19438 RNU6-935P-201ENST00000410371 100 ntBASIC1.58□□□□□ -2.16
TNFRSF1AP19438 RNU6-1054P-201ENST00000411293 104 ntBASIC1.58□□□□□ -2.16
TNFRSF1AP19438 RN7SL274P-201ENST00000492268 272 ntBASIC1.58□□□□□ -2.16
TNFRSF1AP19438 RNU6-295P-201ENST00000516901 104 ntBASIC1.58□□□□□ -2.16
TNFRSF1AP19438 AC015712.3-201ENST00000559380 164 ntBASIC1.58□□□□□ -2.16
TNFRSF1AP19438 MIR548H5-201ENST00000580314 60 ntBASIC1.58□□□□□ -2.16
TNFRSF1AP19438 MIR6516-201ENST00000630554 81 ntBASIC1.58□□□□□ -2.16
TNFRSF1AP19438 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
TNFRSF1AP19438 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.57□□□□□ -2.16
TNFRSF1AP19438 MIR377-201ENST00000362145 69 ntBASIC1.57□□□□□ -2.16
TNFRSF1AP19438 RNU6-654P-201ENST00000364373 107 ntBASIC1.57□□□□□ -2.16
TNFRSF1AP19438 RNU6-1187P-201ENST00000364771 110 ntBASIC1.57□□□□□ -2.16
TNFRSF1AP19438 MIR451A-201ENST00000385059 72 ntBASIC1.57□□□□□ -2.16
TNFRSF1AP19438 RNA5SP95-201ENST00000410319 137 ntBASIC1.57□□□□□ -2.16
TNFRSF1AP19438 RNU6-1052P-201ENST00000411398 104 ntBASIC1.57□□□□□ -2.16
TNFRSF1AP19438 RNU6-719P-201ENST00000516671 104 ntBASIC1.57□□□□□ -2.16
TNFRSF1AP19438 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.57□□□□□ -2.16
TNFRSF1AP19438 RNU7-10P-201ENST00000607194 63 ntBASIC1.57□□□□□ -2.16
TNFRSF1AP19438 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
TNFRSF1AP19438 RNU1-78P-201ENST00000391248 165 ntBASIC1.56□□□□□ -2.16
TNFRSF1AP19438 AC069503.3-201ENST00000618674 145 ntBASIC1.56□□□□□ -2.16
TNFRSF1AP19438 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
TNFRSF1AP19438 Y_RNA.56-201ENST00000362798 112 ntBASIC1.55□□□□□ -2.16
TNFRSF1AP19438 SNORA16.1-201ENST00000364597 132 ntBASIC1.55□□□□□ -2.16
TNFRSF1AP19438 Y_RNA.258-201ENST00000364613 105 ntBASIC1.55□□□□□ -2.16
TNFRSF1AP19438 SNORD1A-201ENST00000364968 72 ntBASIC1.55□□□□□ -2.16
TNFRSF1AP19438 SNORA26.9-201ENST00000391322 122 ntBASIC1.55□□□□□ -2.16
TNFRSF1AP19438 MIR1185-1-201ENST00000408598 86 ntBASIC1.55□□□□□ -2.16
TNFRSF1AP19438 AC097635.1-201ENST00000450678 155 ntBASIC1.55□□□□□ -2.16
TNFRSF1AP19438 MIR18B-201ENST00000454574 71 ntBASIC1.55□□□□□ -2.16
TNFRSF1AP19438 Y_RNA.697-201ENST00000516776 113 ntBASIC1.55□□□□□ -2.16
TNFRSF1AP19438 SNRPGP19-201ENST00000603826 189 ntBASIC1.55□□□□□ -2.16
TNFRSF1AP19438 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 252.9 ms