Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 AC036111.3-201ENST00000526389 112 ntBASIC2.94□□□□□ -1.94
CD44P16070 MIR4460-201ENST00000577862 86 ntBASIC2.94□□□□□ -1.94
CD44P16070 MIR3944-201ENST00000581277 108 ntBASIC2.94□□□□□ -1.94
CD44P16070 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CD44P16070 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.93□□□□□ -1.94
CD44P16070 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.93□□□□□ -1.94
CD44P16070 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CD44P16070 RNU7-40P-201ENST00000516397 64 ntBASIC2.93□□□□□ -1.94
CD44P16070 MIR4490-201ENST00000582647 84 ntBASIC2.93□□□□□ -1.94
CD44P16070 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
CD44P16070 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CD44P16070 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
CD44P16070 Y_RNA.74-201ENST00000362911 99 ntBASIC2.92□□□□□ -1.94
CD44P16070 Y_RNA.174-201ENST00000363781 105 ntBASIC2.92□□□□□ -1.94
CD44P16070 AC087499.2-201ENST00000432861 149 ntBASIC2.92□□□□□ -1.94
CD44P16070 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.92□□□□□ -1.94
CD44P16070 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CD44P16070 RNA5SP282-201ENST00000516355 108 ntBASIC2.91□□□□□ -1.94
CD44P16070 MIR548AL-201ENST00000578416 97 ntBASIC2.91□□□□□ -1.94
CD44P16070 MIR3664-201ENST00000579074 99 ntBASIC2.91□□□□□ -1.94
CD44P16070 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.91□□□□□ -1.94
CD44P16070 AC093010.3-201ENST00000570269 15214 ntBASIC2.91□□□□□ -1.94
CD44P16070 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.89□□□□□ -1.95
CD44P16070 RNU6-924P-201ENST00000362926 108 ntBASIC2.89□□□□□ -1.95
CD44P16070 MIR128-1-201ENST00000384921 82 ntBASIC2.89□□□□□ -1.95
CD44P16070 RNU6-172P-201ENST00000411000 93 ntBASIC2.89□□□□□ -1.95
CD44P16070 SNORA31.2-201ENST00000516019 134 ntBASIC2.89□□□□□ -1.95
CD44P16070 RNU6-894P-201ENST00000517094 105 ntBASIC2.89□□□□□ -1.95
CD44P16070 AL033523.1-201ENST00000605153 153 ntBASIC2.89□□□□□ -1.95
CD44P16070 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.89□□□□□ -1.95
CD44P16070 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.89□□□□□ -1.95
CD44P16070 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CD44P16070 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CD44P16070 Y_RNA.282-201ENST00000364793 102 ntBASIC2.88□□□□□ -1.95
CD44P16070 RNU6-439P-201ENST00000384188 106 ntBASIC2.88□□□□□ -1.95
CD44P16070 SNORA48.2-201ENST00000390926 124 ntBASIC2.88□□□□□ -1.95
CD44P16070 RNA5SP270-201ENST00000411361 118 ntBASIC2.88□□□□□ -1.95
CD44P16070 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CD44P16070 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CD44P16070 MIR887-201ENST00000401258 79 ntBASIC2.87□□□□□ -1.95
CD44P16070 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CD44P16070 SNORD1B-201ENST00000363091 84 ntBASIC2.86□□□□□ -1.95
CD44P16070 SNORA67.3-201ENST00000384366 140 ntBASIC2.86□□□□□ -1.95
CD44P16070 MIR527-201ENST00000385244 85 ntBASIC2.86□□□□□ -1.95
CD44P16070 MIR758-201ENST00000390227 88 ntBASIC2.86□□□□□ -1.95
CD44P16070 MIR4804-201ENST00000581683 73 ntBASIC2.86□□□□□ -1.95
CD44P16070 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
CD44P16070 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CD44P16070 SNORA70.4-201ENST00000365509 134 ntBASIC2.85□□□□□ -1.95
CD44P16070 MIR9-1-201ENST00000385198 89 ntBASIC2.85□□□□□ -1.95
CD44P16070 SNORD41.1-201ENST00000391000 69 ntBASIC2.85□□□□□ -1.95
CD44P16070 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.85□□□□□ -1.95
CD44P16070 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.84□□□□□ -1.95
CD44P16070 SNORA63.6-201ENST00000364921 119 ntBASIC2.84□□□□□ -1.95
CD44P16070 RNU6-246P-201ENST00000384702 107 ntBASIC2.84□□□□□ -1.95
CD44P16070 SNORD111-201ENST00000408139 94 ntBASIC2.84□□□□□ -1.95
CD44P16070 RNU5B-6P-201ENST00000516765 68 ntBASIC2.84□□□□□ -1.95
CD44P16070 AL359821.1-201ENST00000605519 182 ntBASIC2.84□□□□□ -1.95
CD44P16070 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC2.84□□□□□ -1.95
CD44P16070 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CD44P16070 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.83□□□□□ -1.96
CD44P16070 U8.9-201ENST00000365667 134 ntBASIC2.83□□□□□ -1.96
CD44P16070 SNORD28-201ENST00000384706 75 ntBASIC2.83□□□□□ -1.96
CD44P16070 MIR517C-201ENST00000385103 95 ntBASIC2.83□□□□□ -1.96
CD44P16070 RNU1-119P-201ENST00000391122 165 ntBASIC2.83□□□□□ -1.96
CD44P16070 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.83□□□□□ -1.96
CD44P16070 AL021921.1-201ENST00000442774 93 ntBASIC2.83□□□□□ -1.96
CD44P16070 Z96811.1-201ENST00000445880 108 ntBASIC2.83□□□□□ -1.96
CD44P16070 RNU7-56P-201ENST00000458744 62 ntBASIC2.83□□□□□ -1.96
CD44P16070 SNORA77B-201ENST00000578179 125 ntBASIC2.83□□□□□ -1.96
CD44P16070 MIR3670-2-201ENST00000582974 65 ntBASIC2.83□□□□□ -1.96
CD44P16070 MIR3670-1-201ENST00000584160 65 ntBASIC2.83□□□□□ -1.96
CD44P16070 MIR3670-3-201ENST00000584855 65 ntBASIC2.83□□□□□ -1.96
CD44P16070 MIR3670-4-201ENST00000612260 65 ntBASIC2.83□□□□□ -1.96
CD44P16070 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.83□□□□□ -1.96
CD44P16070 RNU1-141P-201ENST00000364623 158 ntBASIC2.82□□□□□ -1.96
CD44P16070 SNORA6-201ENST00000384033 151 ntBASIC2.82□□□□□ -1.96
CD44P16070 MIR3200-201ENST00000580767 85 ntBASIC2.82□□□□□ -1.96
CD44P16070 MIR4658-201ENST00000584344 65 ntBASIC2.82□□□□□ -1.96
CD44P16070 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CD44P16070 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CD44P16070 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
CD44P16070 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CD44P16070 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CD44P16070 SNORA70.24-201ENST00000517233 118 ntBASIC2.81□□□□□ -1.96
CD44P16070 CYP3A54P-201ENST00000566950 75 ntBASIC2.81□□□□□ -1.96
CD44P16070 AL157834.3-201ENST00000615543 103 ntBASIC2.81□□□□□ -1.96
CD44P16070 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
CD44P16070 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
CD44P16070 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CD44P16070 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
CD44P16070 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CD44P16070 DEFA7P-201ENST00000382676 285 ntBASIC2.8□□□□□ -1.96
CD44P16070 SNORD109B-201ENST00000458961 67 ntBASIC2.8□□□□□ -1.96
CD44P16070 SNORD109A-201ENST00000459128 67 ntBASIC2.8□□□□□ -1.96
CD44P16070 MIR5092-201ENST00000583139 88 ntBASIC2.8□□□□□ -1.96
CD44P16070 AC010297.1-201ENST00000623948 149 ntBASIC2.8□□□□□ -1.96
CD44P16070 RNU6-518P-201ENST00000516056 96 ntBASIC2.79□□□□□ -1.96
CD44P16070 SNORA31.25-201ENST00000517242 134 ntBASIC2.79□□□□□ -1.96
CD44P16070 AL136317.1-201ENST00000612653 226 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms