Protein–RNA interactions for Protein: P14651

HOXB3, Homeobox protein Hox-B3, humanhuman

Predicted RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3P14651 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.77□□□□□ -1.97
HOXB3P14651 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
HOXB3P14651 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
HOXB3P14651 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
HOXB3P14651 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
HOXB3P14651 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
HOXB3P14651 AL359851.1-201ENST00000569460 4997 ntBASIC2.76□□□□□ -1.97
HOXB3P14651 RNA5SP289-201ENST00000362332 137 ntBASIC2.76□□□□□ -1.97
HOXB3P14651 Y_RNA.250-201ENST00000364542 110 ntBASIC2.76□□□□□ -1.97
HOXB3P14651 RNU6-54P-201ENST00000365563 107 ntBASIC2.76□□□□□ -1.97
HOXB3P14651 RNU6-1162P-201ENST00000384443 104 ntBASIC2.76□□□□□ -1.97
HOXB3P14651 Y_RNA.540-201ENST00000384638 111 ntBASIC2.76□□□□□ -1.97
HOXB3P14651 MIR499A-201ENST00000384903 122 ntBASIC2.76□□□□□ -1.97
HOXB3P14651 MIR617-201ENST00000385030 97 ntBASIC2.76□□□□□ -1.97
HOXB3P14651 SNORD83.1-201ENST00000411362 77 ntBASIC2.76□□□□□ -1.97
HOXB3P14651 RNA5SP147-201ENST00000516493 109 ntBASIC2.76□□□□□ -1.97
HOXB3P14651 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.76□□□□□ -1.97
HOXB3P14651 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
HOXB3P14651 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.75□□□□□ -1.97
HOXB3P14651 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HOXB3P14651 VTRNA1-1-201ENST00000363120 99 ntBASIC2.75□□□□□ -1.97
HOXB3P14651 RNU4-33P-201ENST00000364316 85 ntBASIC2.75□□□□□ -1.97
HOXB3P14651 RNU6-934P-201ENST00000365154 107 ntBASIC2.75□□□□□ -1.97
HOXB3P14651 JTBP1-201ENST00000441314 247 ntBASIC2.75□□□□□ -1.97
HOXB3P14651 AC067940.1-201ENST00000458411 300 ntBASIC2.75□□□□□ -1.97
HOXB3P14651 RNU6-698P-201ENST00000363523 107 ntBASIC2.74□□□□□ -1.97
HOXB3P14651 RNU6-34P-201ENST00000364874 107 ntBASIC2.74□□□□□ -1.97
HOXB3P14651 Y_RNA.374-201ENST00000365606 101 ntBASIC2.74□□□□□ -1.97
HOXB3P14651 MIR517B-201ENST00000385102 67 ntBASIC2.74□□□□□ -1.97
HOXB3P14651 snoU13.21-201ENST00000459368 105 ntBASIC2.74□□□□□ -1.97
HOXB3P14651 MIR548AG2-201ENST00000581228 64 ntBASIC2.74□□□□□ -1.97
HOXB3P14651 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
HOXB3P14651 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HOXB3P14651 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HOXB3P14651 MIR27B-201ENST00000385129 97 ntBASIC2.73□□□□□ -1.97
HOXB3P14651 AL157398.1-201ENST00000452981 186 ntBASIC2.73□□□□□ -1.97
HOXB3P14651 RNU1-112P-201ENST00000364401 164 ntBASIC2.72□□□□□ -1.97
HOXB3P14651 RN7SKP223-201ENST00000410582 62 ntBASIC2.72□□□□□ -1.97
HOXB3P14651 RNA5SP270-201ENST00000411361 118 ntBASIC2.72□□□□□ -1.97
HOXB3P14651 RNA5SP480-201ENST00000516840 109 ntBASIC2.72□□□□□ -1.97
HOXB3P14651 MIR4771-2-201ENST00000577758 74 ntBASIC2.72□□□□□ -1.97
HOXB3P14651 MIR4771-1-201ENST00000582617 74 ntBASIC2.72□□□□□ -1.97
HOXB3P14651 MIR8070-201ENST00000616510 88 ntBASIC2.72□□□□□ -1.97
HOXB3P14651 MIR548F3-201ENST00000408509 87 ntBASIC2.71□□□□□ -1.98
HOXB3P14651 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC2.71□□□□□ -1.98
HOXB3P14651 AC018659.1-201ENST00000551083 169 ntBASIC2.71□□□□□ -1.98
HOXB3P14651 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HOXB3P14651 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.71□□□□□ -1.98
HOXB3P14651 RNU6-859P-201ENST00000362728 107 ntBASIC2.7□□□□□ -1.98
HOXB3P14651 RNU6-364P-201ENST00000384387 107 ntBASIC2.7□□□□□ -1.98
HOXB3P14651 RNA5SP425-201ENST00000410336 112 ntBASIC2.7□□□□□ -1.98
HOXB3P14651 RPS29P6-201ENST00000438196 145 ntBASIC2.7□□□□□ -1.98
HOXB3P14651 SNORD42B-201ENST00000458893 67 ntBASIC2.7□□□□□ -1.98
HOXB3P14651 AC021146.9-201ENST00000512503 156 ntBASIC2.7□□□□□ -1.98
HOXB3P14651 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
HOXB3P14651 ZNF355P-201ENST00000427301 3216 ntBASIC2.7□□□□□ -1.98
HOXB3P14651 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HOXB3P14651 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HOXB3P14651 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HOXB3P14651 MIR521-2-201ENST00000384818 87 ntBASIC2.69□□□□□ -1.98
HOXB3P14651 AL138827.1-201ENST00000402666 306 ntBASIC2.69□□□□□ -1.98
HOXB3P14651 RNU6ATAC29P-201ENST00000408088 125 ntBASIC2.69□□□□□ -1.98
HOXB3P14651 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.69□□□□□ -1.98
HOXB3P14651 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.69□□□□□ -1.98
HOXB3P14651 RNA5SP403-201ENST00000363598 108 ntBASIC2.68□□□□□ -1.98
HOXB3P14651 SNORD113.3-201ENST00000364630 78 ntBASIC2.68□□□□□ -1.98
HOXB3P14651 RNU6V-201ENST00000384105 107 ntBASIC2.68□□□□□ -1.98
HOXB3P14651 SNORD88.1-201ENST00000408684 91 ntBASIC2.68□□□□□ -1.98
HOXB3P14651 RNA5SP450-201ENST00000411206 102 ntBASIC2.68□□□□□ -1.98
HOXB3P14651 SNORA40.17-201ENST00000517256 115 ntBASIC2.68□□□□□ -1.98
HOXB3P14651 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HOXB3P14651 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.67□□□□□ -1.98
HOXB3P14651 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HOXB3P14651 SNORD114-1-201ENST00000362705 72 ntBASIC2.67□□□□□ -1.98
HOXB3P14651 RNU6-990P-201ENST00000364385 104 ntBASIC2.67□□□□□ -1.98
HOXB3P14651 RNU4-53P-201ENST00000410828 140 ntBASIC2.67□□□□□ -1.98
HOXB3P14651 SNORA31.11-201ENST00000516528 139 ntBASIC2.67□□□□□ -1.98
HOXB3P14651 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
HOXB3P14651 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HOXB3P14651 SNORD115-24-201ENST00000363528 82 ntBASIC2.66□□□□□ -1.98
HOXB3P14651 MIR519E-201ENST00000385075 84 ntBASIC2.66□□□□□ -1.98
HOXB3P14651 RNU7-174P-201ENST00000516248 59 ntBASIC2.66□□□□□ -1.98
HOXB3P14651 FO624990.1-201ENST00000636373 85 ntBASIC2.66□□□□□ -1.98
HOXB3P14651 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.65□□□□□ -1.98
HOXB3P14651 MIR9-1-201ENST00000385198 89 ntBASIC2.65□□□□□ -1.99
HOXB3P14651 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.65□□□□□ -1.99
HOXB3P14651 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.64□□□□□ -1.99
HOXB3P14651 RNA5SP21-201ENST00000410917 96 ntBASIC2.64□□□□□ -1.99
HOXB3P14651 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.64□□□□□ -1.99
HOXB3P14651 RNU7-74P-201ENST00000459104 62 ntBASIC2.64□□□□□ -1.99
HOXB3P14651 RNU6-231P-201ENST00000517122 103 ntBASIC2.64□□□□□ -1.99
HOXB3P14651 MIR3664-201ENST00000579074 99 ntBASIC2.64□□□□□ -1.99
HOXB3P14651 U4.4-201ENST00000620626 117 ntBASIC2.64□□□□□ -1.99
HOXB3P14651 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.64□□□□□ -1.99
HOXB3P14651 MIR938-201ENST00000401216 83 ntBASIC2.63□□□□□ -1.99
HOXB3P14651 MIR4529-201ENST00000578110 78 ntBASIC2.63□□□□□ -1.99
HOXB3P14651 MIR3670-2-201ENST00000582974 65 ntBASIC2.63□□□□□ -1.99
HOXB3P14651 MIR4676-201ENST00000583078 72 ntBASIC2.63□□□□□ -1.99
HOXB3P14651 MIR3670-1-201ENST00000584160 65 ntBASIC2.63□□□□□ -1.99
HOXB3P14651 MIR3670-3-201ENST00000584855 65 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms