Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 AC024614.3-201ENST00000637860 256 ntBASIC-4.02□□□□□ -3.05
VCANP13611 Y_RNA.243-201ENST00000364481 109 ntBASIC-4.02□□□□□ -3.05
VCANP13611 PCMTD1P1-201ENST00000455560 355 ntBASIC-4.02□□□□□ -3.05
VCANP13611 MIR5188-201ENST00000583467 113 ntBASIC-4.02□□□□□ -3.05
VCANP13611 AC024933.1-201ENST00000608472 348 ntBASIC-4.02□□□□□ -3.05
VCANP13611 RNU6-627P-201ENST00000364032 102 ntBASIC-4.03□□□□□ -3.05
VCANP13611 RNU7-116P-201ENST00000516940 62 ntBASIC-4.03□□□□□ -3.05
VCANP13611 RNY4P19-201ENST00000362530 96 ntBASIC-4.03□□□□□ -3.05
VCANP13611 Y_RNA.584-201ENST00000391090 114 ntBASIC-4.04□□□□□ -3.06
VCANP13611 Y_RNA.173-201ENST00000363776 113 ntBASIC-4.04□□□□□ -3.06
VCANP13611 RNU6-472P-201ENST00000384299 107 ntBASIC-4.05□□□□□ -3.06
VCANP13611 MIR548AE2-201ENST00000583456 67 ntBASIC-4.05□□□□□ -3.06
VCANP13611 CLPTM1LP1-201ENST00000604519 484 ntBASIC-4.05□□□□□ -3.06
VCANP13611 AC104010.1-201ENST00000616889 150 ntBASIC-4.05□□□□□ -3.06
VCANP13611 Y_RNA.373-201ENST00000365600 103 ntBASIC-4.05□□□□□ -3.06
VCANP13611 MIR1278-201ENST00000408753 81 ntBASIC-4.05□□□□□ -3.06
VCANP13611 MIR2355-201ENST00000517199 87 ntBASIC-4.05□□□□□ -3.06
VCANP13611 AC091932.4-201ENST00000623386 200 ntBASIC-4.05□□□□□ -3.06
VCANP13611 RNU6-836P-201ENST00000362920 107 ntBASIC-4.05□□□□□ -3.06
VCANP13611 AC138915.2-201ENST00000569776 97 ntBASIC-4.05□□□□□ -3.06
VCANP13611 SNORD38.2-201ENST00000384470 69 ntBASIC-4.06□□□□□ -3.06
VCANP13611 AC084782.3-201ENST00000612282 578 ntBASIC-4.06□□□□□ -3.06
VCANP13611 MIR376B-201ENST00000614515 100 ntBASIC-4.06□□□□□ -3.06
VCANP13611 AC006927.2-201ENST00000639256 389 ntBASIC-4.06□□□□□ -3.06
VCANP13611 SNORD61-201ENST00000384252 73 ntBASIC-4.06□□□□□ -3.06
VCANP13611 MIR5692C1-201ENST00000585309 91 ntBASIC-4.06□□□□□ -3.06
VCANP13611 AC092807.2-201ENST00000609367 243 ntBASIC-4.06□□□□□ -3.06
VCANP13611 SNORA41B-201ENST00000384785 128 ntBASIC-4.06□□□□□ -3.06
VCANP13611 RPL39P5-202ENST00000512505 151 ntBASIC-4.06□□□□□ -3.06
VCANP13611 AL080274.1-201ENST00000605565 220 ntBASIC-4.06□□□□□ -3.06
VCANP13611 RNU6-742P-201ENST00000365289 107 ntBASIC-4.07□□□□□ -3.06
VCANP13611 RNU6-162P-201ENST00000516228 103 ntBASIC-4.07□□□□□ -3.06
VCANP13611 RNU6-267P-201ENST00000516714 103 ntBASIC-4.07□□□□□ -3.06
VCANP13611 MTATP6P29-201ENST00000415057 132 ntBASIC-4.07□□□□□ -3.06
VCANP13611 MIR548V-201ENST00000584165 80 ntBASIC-4.07□□□□□ -3.06
VCANP13611 MIR4317-201ENST00000637586 65 ntBASIC-4.08□□□□□ -3.06
VCANP13611 U6.104-201ENST00000637979 90 ntBASIC-4.08□□□□□ -3.06
VCANP13611 MIR410-201ENST00000362222 80 ntBASIC-4.09□□□□□ -3.06
VCANP13611 Y_RNA.123-201ENST00000363338 102 ntBASIC-4.09□□□□□ -3.06
VCANP13611 AC018638.8-201ENST00000588755 281 ntBASIC-4.09□□□□□ -3.06
VCANP13611 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-4.09□□□□□ -3.06
VCANP13611 RNU6-625P-201ENST00000459412 107 ntBASIC-4.09□□□□□ -3.06
VCANP13611 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-4.09□□□□□ -3.06
VCANP13611 AC009248.2-201ENST00000619826 254 ntBASIC-4.09□□□□□ -3.06
VCANP13611 RNU7-136P-201ENST00000458819 69 ntBASIC-4.1□□□□□ -3.06
VCANP13611 RNU6-976P-201ENST00000516086 111 ntBASIC-4.1□□□□□ -3.06
VCANP13611 AP003357.1-201ENST00000604497 148 ntBASIC-4.1□□□□□ -3.06
VCANP13611 AC107308.1-201ENST00000615897 301 ntBASIC-4.1□□□□□ -3.06
VCANP13611 MTND3P2-201ENST00000438452 342 ntBASIC-4.1□□□□□ -3.07
VCANP13611 RNU6-1170P-201ENST00000515974 106 ntBASIC-4.1□□□□□ -3.07
VCANP13611 CHEK2P4-201ENST00000450340 246 ntBASIC-4.1□□□□□ -3.07
VCANP13611 AC115989.2-201ENST00000578640 563 ntBASIC-4.1□□□□□ -3.07
VCANP13611 Y_RNA.105-201ENST00000363182 111 ntBASIC-4.11□□□□□ -3.07
VCANP13611 MIR1322-201ENST00000638013 71 ntBASIC-4.11□□□□□ -3.07
VCANP13611 Y_RNA.286-201ENST00000364813 102 ntBASIC-4.11□□□□□ -3.07
VCANP13611 MIR521-1-201ENST00000384902 87 ntBASIC-4.11□□□□□ -3.07
VCANP13611 RNU6-612P-201ENST00000516909 102 ntBASIC-4.11□□□□□ -3.07
VCANP13611 RNU6-1153P-201ENST00000516760 105 ntBASIC-4.11□□□□□ -3.07
VCANP13611 RNU6-65P-201ENST00000516332 98 ntBASIC-4.12□□□□□ -3.07
VCANP13611 ZNF92P2-201ENST00000600543 1059 ntBASIC-4.12□□□□□ -3.07
VCANP13611 SNORA24B-201ENST00000384176 131 ntBASIC-4.13□□□□□ -3.07
VCANP13611 AC009779.6-201ENST00000603972 165 ntBASIC-4.13□□□□□ -3.07
VCANP13611 AC002044.1-201ENST00000606707 158 ntBASIC-4.13□□□□□ -3.07
VCANP13611 RNU6-1051P-201ENST00000365471 102 ntBASIC-4.13□□□□□ -3.07
VCANP13611 RNU6-172P-201ENST00000411000 93 ntBASIC-4.13□□□□□ -3.07
VCANP13611 AL158211.2-201ENST00000607282 395 ntBASIC-4.13□□□□□ -3.07
VCANP13611 RNU6-728P-201ENST00000365375 104 ntBASIC-4.13□□□□□ -3.07
VCANP13611 SNORA40.2-201ENST00000390847 128 ntBASIC-4.13□□□□□ -3.07
VCANP13611 AC090971.5-201ENST00000621102 293 ntBASIC-4.13□□□□□ -3.07
VCANP13611 U6.106-201ENST00000636360 105 ntBASIC-4.13□□□□□ -3.07
VCANP13611 MIR630-201ENST00000384957 97 ntBASIC-4.14□□□□□ -3.07
VCANP13611 RNU6-379P-201ENST00000363813 104 ntBASIC-4.14□□□□□ -3.07
VCANP13611 Y_RNA.531-201ENST00000384589 121 ntBASIC-4.14□□□□□ -3.07
VCANP13611 Y_RNA.556-201ENST00000384677 113 ntBASIC-4.14□□□□□ -3.07
VCANP13611 AL365265.1-201ENST00000621045 234 ntBASIC-4.14□□□□□ -3.07
VCANP13611 MIR3674-201ENST00000636576 68 ntBASIC-4.15□□□□□ -3.07
VCANP13611 Y_RNA.299-201ENST00000364973 94 ntBASIC-4.16□□□□□ -3.07
VCANP13611 MIR548U-201ENST00000390728 81 ntBASIC-4.16□□□□□ -3.07
VCANP13611 MTND2P3-201ENST00000452458 470 ntBASIC-4.16□□□□□ -3.07
VCANP13611 MIR4790-201ENST00000577799 79 ntBASIC-4.16□□□□□ -3.07
VCANP13611 AC090617.10-201ENST00000624308 134 ntBASIC-4.16□□□□□ -3.08
VCANP13611 RNU2-31P-201ENST00000516954 155 ntBASIC-4.16□□□□□ -3.08
VCANP13611 RNU6-776P-201ENST00000364403 104 ntBASIC-4.17□□□□□ -3.08
VCANP13611 RNU6-1022P-201ENST00000365049 104 ntBASIC-4.17□□□□□ -3.08
VCANP13611 RNU2-61P-201ENST00000411069 191 ntBASIC-4.17□□□□□ -3.08
VCANP13611 RNU6-334P-201ENST00000517072 102 ntBASIC-4.17□□□□□ -3.08
VCANP13611 Y_RNA.389-201ENST00000383924 113 ntBASIC-4.17□□□□□ -3.08
VCANP13611 AC073869.6-201ENST00000640656 341 ntBASIC-4.17□□□□□ -3.08
VCANP13611 SNORD77B-201ENST00000391112 67 ntBASIC-4.17□□□□□ -3.08
VCANP13611 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-4.17□□□□□ -3.08
VCANP13611 Y_RNA.69-201ENST00000362885 109 ntBASIC-4.18□□□□□ -3.08
VCANP13611 HULC.1-201ENST00000612720 240 ntBASIC-4.18□□□□□ -3.08
VCANP13611 DLEU2_3.2-201ENST00000612883 73 ntBASIC-4.18□□□□□ -3.08
VCANP13611 AL451105.1-201ENST00000450005 189 ntBASIC-4.19□□□□□ -3.08
VCANP13611 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-4.19□□□□□ -3.08
VCANP13611 ELOCP17-201ENST00000414751 326 ntBASIC-4.19□□□□□ -3.08
VCANP13611 MRPS36P3-201ENST00000519284 130 ntBASIC-4.19□□□□□ -3.08
VCANP13611 AC025166.1-201ENST00000612411 163 ntBASIC-4.19□□□□□ -3.08
VCANP13611 RNU5F-6P-201ENST00000362979 116 ntBASIC-4.2□□□□□ -3.08
VCANP13611 Y_RNA.120-201ENST00000363304 110 ntBASIC-4.2□□□□□ -3.08
Retrieved 100 of 98,524 protein–RNA pairs in 276.9 ms