Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
RARAP10276 SNORA16.1-201ENST00000364597 132 ntBASIC1.94□□□□□ -2.1
RARAP10276 SNORD113.3-201ENST00000364630 78 ntBASIC1.94□□□□□ -2.1
RARAP10276 AC048334.1-201ENST00000477975 159 ntBASIC1.94□□□□□ -2.1
RARAP10276 TRMT112P2-201ENST00000512910 132 ntBASIC1.94□□□□□ -2.1
RARAP10276 Y_RNA.660-201ENST00000516002 120 ntBASIC1.94□□□□□ -2.1
RARAP10276 RNU6-1108P-201ENST00000516308 104 ntBASIC1.94□□□□□ -2.1
RARAP10276 AC036111.3-201ENST00000526389 112 ntBASIC1.94□□□□□ -2.1
RARAP10276 MIR548H5-201ENST00000580314 60 ntBASIC1.94□□□□□ -2.1
RARAP10276 RNU7-10P-201ENST00000607194 63 ntBASIC1.94□□□□□ -2.1
RARAP10276 Y_RNA.788-201ENST00000622394 112 ntBASIC1.94□□□□□ -2.1
RARAP10276 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
RARAP10276 Y_RNA.56-201ENST00000362798 112 ntBASIC1.93□□□□□ -2.1
RARAP10276 Y_RNA.330-201ENST00000365230 109 ntBASIC1.93□□□□□ -2.1
RARAP10276 RNU6-765P-201ENST00000516916 99 ntBASIC1.93□□□□□ -2.1
RARAP10276 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.93□□□□□ -2.1
RARAP10276 RNU6-934P-201ENST00000365154 107 ntBASIC1.92□□□□□ -2.1
RARAP10276 SNORA75.2-201ENST00000391138 150 ntBASIC1.92□□□□□ -2.1
RARAP10276 SNORA75.3-201ENST00000391231 150 ntBASIC1.92□□□□□ -2.1
RARAP10276 RPS27P16-201ENST00000425758 201 ntBASIC1.92□□□□□ -2.1
RARAP10276 AC015818.7-201ENST00000428754 109 ntBASIC1.92□□□□□ -2.1
RARAP10276 AC092628.1-201ENST00000436250 252 ntBASIC1.92□□□□□ -2.1
RARAP10276 AC003989.2-201ENST00000440224 169 ntBASIC1.92□□□□□ -2.1
RARAP10276 RNA5SP220-201ENST00000516298 104 ntBASIC1.92□□□□□ -2.1
RARAP10276 MIR3198-2-201ENST00000577868 80 ntBASIC1.92□□□□□ -2.1
RARAP10276 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
RARAP10276 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
RARAP10276 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RARAP10276 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
RARAP10276 MIR378A-201ENST00000362177 66 ntBASIC1.91□□□□□ -2.1
RARAP10276 Y_RNA.30-201ENST00000362572 97 ntBASIC1.91□□□□□ -2.1
RARAP10276 Y_RNA.545-201ENST00000384652 105 ntBASIC1.91□□□□□ -2.1
RARAP10276 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
RARAP10276 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
RARAP10276 RNU6-380P-201ENST00000410207 107 ntBASIC1.91□□□□□ -2.1
RARAP10276 Y_RNA.809-201ENST00000516058 95 ntBASIC1.91□□□□□ -2.1
RARAP10276 MIR4419B-201ENST00000577260 68 ntBASIC1.91□□□□□ -2.1
RARAP10276 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.91□□□□□ -2.1
RARAP10276 RNU6-1260P-201ENST00000362944 107 ntBASIC1.9□□□□□ -2.11
RARAP10276 RNU1-17P-201ENST00000363022 152 ntBASIC1.9□□□□□ -2.11
RARAP10276 SNORD48-201ENST00000364953 64 ntBASIC1.9□□□□□ -2.11
RARAP10276 MIR125B2-201ENST00000385128 89 ntBASIC1.9□□□□□ -2.11
RARAP10276 SNORD77.2-201ENST00000391045 68 ntBASIC1.9□□□□□ -2.11
RARAP10276 AL606490.4-201ENST00000423117 127 ntBASIC1.9□□□□□ -2.11
RARAP10276 SCARNA18B-201ENST00000458806 135 ntBASIC1.9□□□□□ -2.11
RARAP10276 AC004223.1-201ENST00000479840 271 ntBASIC1.9□□□□□ -2.11
RARAP10276 SNORA31.2-201ENST00000516019 134 ntBASIC1.9□□□□□ -2.11
RARAP10276 MIR3122-201ENST00000577243 73 ntBASIC1.9□□□□□ -2.11
RARAP10276 MIR4771-2-201ENST00000577758 74 ntBASIC1.9□□□□□ -2.11
RARAP10276 MIR4771-1-201ENST00000582617 74 ntBASIC1.9□□□□□ -2.11
RARAP10276 AL096840.1-201ENST00000603287 93 ntBASIC1.9□□□□□ -2.11
RARAP10276 TRDV1-202ENST00000621643 102 ntBASIC1.9□□□□□ -2.11
RARAP10276 Y_RNA.42-201ENST00000362660 108 ntBASIC1.89□□□□□ -2.11
RARAP10276 Y_RNA.205-201ENST00000364128 113 ntBASIC1.89□□□□□ -2.11
RARAP10276 Y_RNA.363-201ENST00000365529 113 ntBASIC1.89□□□□□ -2.11
RARAP10276 MIR520H-201ENST00000385126 88 ntBASIC1.89□□□□□ -2.11
RARAP10276 SNORD90-201ENST00000391145 111 ntBASIC1.89□□□□□ -2.11
RARAP10276 AC108667.1-201ENST00000428618 249 ntBASIC1.89□□□□□ -2.11
RARAP10276 RN7SKP88-201ENST00000516847 250 ntBASIC1.89□□□□□ -2.11
RARAP10276 7SK.8-201ENST00000612110 250 ntBASIC1.89□□□□□ -2.11
RARAP10276 7SK.11-201ENST00000615477 250 ntBASIC1.89□□□□□ -2.11
RARAP10276 7SK.13-201ENST00000622040 250 ntBASIC1.89□□□□□ -2.11
RARAP10276 Y_RNA.532-201ENST00000384590 113 ntBASIC1.88□□□□□ -2.11
RARAP10276 MIR9-3-201ENST00000385084 90 ntBASIC1.88□□□□□ -2.11
RARAP10276 Y_RNA.697-201ENST00000516776 113 ntBASIC1.88□□□□□ -2.11
RARAP10276 RNU6-448P-201ENST00000517052 107 ntBASIC1.88□□□□□ -2.11
RARAP10276 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.88□□□□□ -2.11
RARAP10276 AC106800.4-201ENST00000614905 153 ntBASIC1.88□□□□□ -2.11
RARAP10276 RNU1-78P-201ENST00000391248 165 ntBASIC1.87□□□□□ -2.11
RARAP10276 AC097635.1-201ENST00000450678 155 ntBASIC1.87□□□□□ -2.11
RARAP10276 RNA5SP182-201ENST00000516064 82 ntBASIC1.87□□□□□ -2.11
RARAP10276 RNU6-523P-201ENST00000516304 54 ntBASIC1.87□□□□□ -2.11
RARAP10276 RNU6-208P-201ENST00000362431 107 ntBASIC1.86□□□□□ -2.11
RARAP10276 SNORD111-201ENST00000408139 94 ntBASIC1.86□□□□□ -2.11
RARAP10276 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.86□□□□□ -2.11
RARAP10276 RNU7-40P-201ENST00000516397 64 ntBASIC1.86□□□□□ -2.11
RARAP10276 RNU7-156P-201ENST00000517214 74 ntBASIC1.86□□□□□ -2.11
RARAP10276 AL359821.1-201ENST00000605519 182 ntBASIC1.86□□□□□ -2.11
RARAP10276 Y_RNA.264-201ENST00000364665 102 ntBASIC1.85□□□□□ -2.11
RARAP10276 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
RARAP10276 MIR676-201ENST00000390702 67 ntBASIC1.85□□□□□ -2.11
RARAP10276 RPS26P5-201ENST00000418544 335 ntBASIC1.85□□□□□ -2.11
RARAP10276 AC008834.1-201ENST00000511612 175 ntBASIC1.85□□□□□ -2.11
RARAP10276 AC023827.1-201ENST00000569247 97 ntBASIC1.85□□□□□ -2.11
RARAP10276 MIR3134-201ENST00000579433 74 ntBASIC1.85□□□□□ -2.11
RARAP10276 MIR4422-201ENST00000581938 83 ntBASIC1.85□□□□□ -2.11
RARAP10276 AL645939.4-201ENST00000604495 135 ntBASIC1.85□□□□□ -2.11
RARAP10276 SNORA40.18-201ENST00000391200 128 ntBASIC1.84□□□□□ -2.11
RARAP10276 RNU6-295P-201ENST00000516901 104 ntBASIC1.84□□□□□ -2.11
RARAP10276 MIR4676-201ENST00000583078 72 ntBASIC1.84□□□□□ -2.11
RARAP10276 RMST_2.1-201ENST00000617263 136 ntBASIC1.84□□□□□ -2.11
RARAP10276 U6.100-201ENST00000636230 99 ntBASIC1.84□□□□□ -2.11
RARAP10276 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
RARAP10276 Y_RNA.239-201ENST00000364444 113 ntBASIC1.83□□□□□ -2.12
RARAP10276 MIR599-201ENST00000385069 95 ntBASIC1.83□□□□□ -2.12
RARAP10276 MIR934-201ENST00000401241 83 ntBASIC1.83□□□□□ -2.12
RARAP10276 AL591704.2-201ENST00000421658 181 ntBASIC1.83□□□□□ -2.12
RARAP10276 RNU7-21P-201ENST00000459430 62 ntBASIC1.83□□□□□ -2.12
RARAP10276 AC138907.6-201ENST00000568401 126 ntBASIC1.83□□□□□ -2.12
RARAP10276 AC138869.1-201ENST00000568623 124 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 189.7 ms