Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
HOXC6P09630 MIR19B1-201ENST00000384829 87 ntBASIC0.95□□□□□ -2.26
HOXC6P09630 MIR216A-201ENST00000385063 110 ntBASIC0.95□□□□□ -2.26
HOXC6P09630 RNU6-644P-201ENST00000391155 98 ntBASIC0.95□□□□□ -2.26
HOXC6P09630 MIR548G-201ENST00000408442 89 ntBASIC0.95□□□□□ -2.26
HOXC6P09630 AC096720.1-201ENST00000604441 183 ntBASIC0.95□□□□□ -2.26
HOXC6P09630 RNU6-90P-201ENST00000606352 106 ntBASIC0.95□□□□□ -2.26
HOXC6P09630 MIR6082-201ENST00000613604 109 ntBASIC0.95□□□□□ -2.26
HOXC6P09630 Y_RNA.95-201ENST00000363079 95 ntBASIC0.94□□□□□ -2.26
HOXC6P09630 RNU6-640P-201ENST00000363693 105 ntBASIC0.94□□□□□ -2.26
HOXC6P09630 RNU6-364P-201ENST00000384387 107 ntBASIC0.94□□□□□ -2.26
HOXC6P09630 Y_RNA.544-201ENST00000384650 113 ntBASIC0.94□□□□□ -2.26
HOXC6P09630 MIR520F-201ENST00000384824 87 ntBASIC0.94□□□□□ -2.26
HOXC6P09630 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.94□□□□□ -2.26
HOXC6P09630 RNU7-56P-201ENST00000458744 62 ntBASIC0.94□□□□□ -2.26
HOXC6P09630 RNU7-102P-201ENST00000458948 62 ntBASIC0.94□□□□□ -2.26
HOXC6P09630 Y_RNA.10-201ENST00000362371 110 ntBASIC0.93□□□□□ -2.26
HOXC6P09630 RNU6-1298P-201ENST00000362456 101 ntBASIC0.93□□□□□ -2.26
HOXC6P09630 RNU6-1335P-201ENST00000365426 107 ntBASIC0.93□□□□□ -2.26
HOXC6P09630 Y_RNA.567-201ENST00000384736 106 ntBASIC0.93□□□□□ -2.26
HOXC6P09630 MIR942-201ENST00000401111 86 ntBASIC0.93□□□□□ -2.26
HOXC6P09630 MIR938-201ENST00000401216 83 ntBASIC0.93□□□□□ -2.26
HOXC6P09630 MIR1827-201ENST00000408549 66 ntBASIC0.93□□□□□ -2.26
HOXC6P09630 RNY4P30-201ENST00000410216 95 ntBASIC0.93□□□□□ -2.26
HOXC6P09630 MTATP8P2-201ENST00000435212 202 ntBASIC0.93□□□□□ -2.26
HOXC6P09630 RNU7-61P-201ENST00000515897 61 ntBASIC0.93□□□□□ -2.26
HOXC6P09630 RNU6-162P-201ENST00000516228 103 ntBASIC0.93□□□□□ -2.26
HOXC6P09630 Y_RNA.818-201ENST00000618813 71 ntBASIC0.93□□□□□ -2.26
HOXC6P09630 MIR6513-201ENST00000621188 64 ntBASIC0.93□□□□□ -2.26
HOXC6P09630 Y_RNA.107-201ENST00000363190 121 ntBASIC0.92□□□□□ -2.26
HOXC6P09630 RNU4-58P-201ENST00000363192 141 ntBASIC0.92□□□□□ -2.26
HOXC6P09630 SNORD45B-201ENST00000364617 72 ntBASIC0.92□□□□□ -2.26
HOXC6P09630 MIR488-201ENST00000365739 83 ntBASIC0.92□□□□□ -2.26
HOXC6P09630 RNY1P4-201ENST00000384595 115 ntBASIC0.92□□□□□ -2.26
HOXC6P09630 AC067940.1-201ENST00000458411 300 ntBASIC0.92□□□□□ -2.26
HOXC6P09630 RNU6-351P-201ENST00000516097 100 ntBASIC0.92□□□□□ -2.26
HOXC6P09630 SNORA40.13-201ENST00000516379 120 ntBASIC0.92□□□□□ -2.26
HOXC6P09630 SNORD92-201ENST00000585078 85 ntBASIC0.92□□□□□ -2.26
HOXC6P09630 HSBP1P2-201ENST00000299671 229 ntBASIC0.91□□□□□ -2.26
HOXC6P09630 Y_RNA.42-201ENST00000362660 108 ntBASIC0.91□□□□□ -2.26
HOXC6P09630 Y_RNA.93-201ENST00000363066 109 ntBASIC0.91□□□□□ -2.26
HOXC6P09630 Y_RNA.173-201ENST00000363776 113 ntBASIC0.91□□□□□ -2.26
HOXC6P09630 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.91□□□□□ -2.26
HOXC6P09630 RNU6-850P-201ENST00000516934 103 ntBASIC0.91□□□□□ -2.26
HOXC6P09630 SNORD38.2-201ENST00000384470 69 ntBASIC0.9□□□□□ -2.27
HOXC6P09630 MIR181B2-201ENST00000385004 89 ntBASIC0.9□□□□□ -2.27
HOXC6P09630 RNU1-119P-201ENST00000391122 165 ntBASIC0.9□□□□□ -2.27
HOXC6P09630 AC103810.7-201ENST00000607821 91 ntBASIC0.9□□□□□ -2.27
HOXC6P09630 SNORD114-2-201ENST00000363953 78 ntBASIC0.89□□□□□ -2.27
HOXC6P09630 RNA5SP245-201ENST00000364239 121 ntBASIC0.89□□□□□ -2.27
HOXC6P09630 RNY1P7-201ENST00000384743 110 ntBASIC0.89□□□□□ -2.27
HOXC6P09630 SNORD100-201ENST00000408573 76 ntBASIC0.89□□□□□ -2.27
HOXC6P09630 SNRPGP12-201ENST00000449481 213 ntBASIC0.89□□□□□ -2.27
HOXC6P09630 RNU7-106P-201ENST00000459514 67 ntBASIC0.89□□□□□ -2.27
HOXC6P09630 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.89□□□□□ -2.27
HOXC6P09630 RNU6-1194P-201ENST00000516208 104 ntBASIC0.89□□□□□ -2.27
HOXC6P09630 Y_RNA.697-201ENST00000516776 113 ntBASIC0.89□□□□□ -2.27
HOXC6P09630 AC138907.6-201ENST00000568401 126 ntBASIC0.89□□□□□ -2.27
HOXC6P09630 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.89□□□□□ -2.27
HOXC6P09630 U7.3-201ENST00000616123 62 ntBASIC0.89□□□□□ -2.27
HOXC6P09630 MIR101-2-201ENST00000362195 79 ntBASIC0.88□□□□□ -2.27
HOXC6P09630 RNU6-1244P-201ENST00000363614 108 ntBASIC0.88□□□□□ -2.27
HOXC6P09630 Y_RNA.190-201ENST00000363964 101 ntBASIC0.88□□□□□ -2.27
HOXC6P09630 RNU6-1187P-201ENST00000364771 110 ntBASIC0.88□□□□□ -2.27
HOXC6P09630 Y_RNA.342-201ENST00000365352 113 ntBASIC0.88□□□□□ -2.27
HOXC6P09630 RNU6-813P-201ENST00000384691 107 ntBASIC0.88□□□□□ -2.27
HOXC6P09630 MIR516A2-201ENST00000384888 90 ntBASIC0.88□□□□□ -2.27
HOXC6P09630 MIR516A1-201ENST00000385033 90 ntBASIC0.88□□□□□ -2.27
HOXC6P09630 MIR520H-201ENST00000385126 88 ntBASIC0.88□□□□□ -2.27
HOXC6P09630 FABP5P4-201ENST00000437203 171 ntBASIC0.88□□□□□ -2.27
HOXC6P09630 TRAJ51-201ENST00000504127 63 ntBASIC0.88□□□□□ -2.27
HOXC6P09630 MIR6866-201ENST00000638146 69 ntBASIC0.88□□□□□ -2.27
HOXC6P09630 Y_RNA.290-201ENST00000364879 114 ntBASIC0.87□□□□□ -2.27
HOXC6P09630 RNU6-1131P-201ENST00000364955 107 ntBASIC0.87□□□□□ -2.27
HOXC6P09630 RNU6-49P-201ENST00000384256 107 ntBASIC0.87□□□□□ -2.27
HOXC6P09630 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.87□□□□□ -2.27
HOXC6P09630 U7.7-201ENST00000459276 60 ntBASIC0.87□□□□□ -2.27
HOXC6P09630 RNU6-1110P-201ENST00000516462 101 ntBASIC0.87□□□□□ -2.27
HOXC6P09630 RNA5SP170-201ENST00000517150 101 ntBASIC0.87□□□□□ -2.27
HOXC6P09630 MIR6835-201ENST00000621552 64 ntBASIC0.87□□□□□ -2.27
HOXC6P09630 AC025521.1-201ENST00000621624 286 ntBASIC0.87□□□□□ -2.27
HOXC6P09630 Y_RNA.57-201ENST00000362806 113 ntBASIC0.86□□□□□ -2.27
HOXC6P09630 SNORD114-24-201ENST00000365029 72 ntBASIC0.86□□□□□ -2.27
HOXC6P09630 RNU6-571P-201ENST00000384128 107 ntBASIC0.86□□□□□ -2.27
HOXC6P09630 Y_RNA.536-201ENST00000384621 113 ntBASIC0.86□□□□□ -2.27
HOXC6P09630 RNU6-291P-201ENST00000384720 107 ntBASIC0.86□□□□□ -2.27
HOXC6P09630 RNU6-535P-201ENST00000384722 107 ntBASIC0.86□□□□□ -2.27
HOXC6P09630 MIR200A-201ENST00000384875 90 ntBASIC0.86□□□□□ -2.27
HOXC6P09630 SNORD105-201ENST00000386910 85 ntBASIC0.86□□□□□ -2.27
HOXC6P09630 MIR936-201ENST00000401264 98 ntBASIC0.86□□□□□ -2.27
HOXC6P09630 RNU6-765P-201ENST00000516916 99 ntBASIC0.86□□□□□ -2.27
HOXC6P09630 RNU6-448P-201ENST00000517052 107 ntBASIC0.86□□□□□ -2.27
HOXC6P09630 MIR5582-201ENST00000579697 68 ntBASIC0.86□□□□□ -2.27
HOXC6P09630 MALAT1.1-201ENST00000618249 95 ntBASIC0.86□□□□□ -2.27
HOXC6P09630 MIR635-201ENST00000384830 98 ntBASIC0.85□□□□□ -2.27
HOXC6P09630 SNORD63B-201ENST00000411005 70 ntBASIC0.85□□□□□ -2.27
HOXC6P09630 Y_RNA.705-201ENST00000516862 110 ntBASIC0.85□□□□□ -2.27
HOXC6P09630 RNU6-158P-201ENST00000517104 100 ntBASIC0.85□□□□□ -2.27
HOXC6P09630 MIR4661-201ENST00000582720 75 ntBASIC0.85□□□□□ -2.27
HOXC6P09630 MIR4439-201ENST00000583746 80 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 200.5 ms