Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 SNORD36A-201ENST00000362874 73 ntBASIC-2.1□□□□□ -2.75
TPM1P09493 Y_RNA.84-201ENST00000363011 104 ntBASIC-2.1□□□□□ -2.75
TPM1P09493 RNU6-905P-201ENST00000384434 107 ntBASIC-2.1□□□□□ -2.75
TPM1P09493 Y_RNA.521-201ENST00000384560 114 ntBASIC-2.1□□□□□ -2.75
TPM1P09493 MIR548E-201ENST00000408287 88 ntBASIC-2.1□□□□□ -2.75
TPM1P09493 RNU6-1057P-201ENST00000517162 102 ntBASIC-2.1□□□□□ -2.75
TPM1P09493 MIR4324-201ENST00000584846 72 ntBASIC-2.1□□□□□ -2.75
TPM1P09493 MIR6738-201ENST00000619620 64 ntBASIC-2.1□□□□□ -2.75
TPM1P09493 Y_RNA.276-201ENST00000364732 109 ntBASIC-2.11□□□□□ -2.75
TPM1P09493 MIR582-201ENST00000365731 98 ntBASIC-2.11□□□□□ -2.75
TPM1P09493 RNU6-578P-201ENST00000390980 103 ntBASIC-2.11□□□□□ -2.75
TPM1P09493 Y_RNA.721-201ENST00000517207 102 ntBASIC-2.11□□□□□ -2.75
TPM1P09493 Y_RNA.28-201ENST00000362554 111 ntBASIC-2.12□□□□□ -2.75
TPM1P09493 Y_RNA.239-201ENST00000364444 113 ntBASIC-2.12□□□□□ -2.75
TPM1P09493 SNORD114-15-201ENST00000364687 72 ntBASIC-2.12□□□□□ -2.75
TPM1P09493 Y_RNA.298-201ENST00000364960 107 ntBASIC-2.12□□□□□ -2.75
TPM1P09493 RNU6-806P-201ENST00000365147 105 ntBASIC-2.12□□□□□ -2.75
TPM1P09493 RNU6-643P-201ENST00000384018 107 ntBASIC-2.12□□□□□ -2.75
TPM1P09493 Y_RNA.590-201ENST00000410140 107 ntBASIC-2.12□□□□□ -2.75
TPM1P09493 RNU6-1143P-201ENST00000516125 104 ntBASIC-2.12□□□□□ -2.75
TPM1P09493 SNORD116-4-201ENST00000384733 96 ntBASIC-2.13□□□□□ -2.75
TPM1P09493 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-2.13□□□□□ -2.75
TPM1P09493 snoR1.1-201ENST00000628177 80 ntBASIC-2.13□□□□□ -2.75
TPM1P09493 AC113618.1-201ENST00000416747 285 ntBASIC-2.14□□□□□ -2.75
TPM1P09493 MIR4282-201ENST00000583613 67 ntBASIC-2.14□□□□□ -2.75
TPM1P09493 AC090971.5-201ENST00000621102 293 ntBASIC-2.14□□□□□ -2.75
TPM1P09493 SNORD114-4-201ENST00000363962 75 ntBASIC-2.15□□□□□ -2.75
TPM1P09493 RNU6-1157P-201ENST00000384456 106 ntBASIC-2.15□□□□□ -2.75
TPM1P09493 MTATP6P21-201ENST00000440681 189 ntBASIC-2.15□□□□□ -2.75
TPM1P09493 AL353813.1-201ENST00000440700 253 ntBASIC-2.15□□□□□ -2.75
TPM1P09493 AC097510.1-201ENST00000510945 133 ntBASIC-2.15□□□□□ -2.75
TPM1P09493 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-2.15□□□□□ -2.75
TPM1P09493 Y_RNA.26-201ENST00000362539 101 ntBASIC-2.16□□□□□ -2.76
TPM1P09493 RNU6-957P-201ENST00000363652 99 ntBASIC-2.16□□□□□ -2.76
TPM1P09493 Y_RNA.353-201ENST00000365440 108 ntBASIC-2.16□□□□□ -2.76
TPM1P09493 RN7SKP19-201ENST00000516016 252 ntBASIC-2.16□□□□□ -2.76
TPM1P09493 Y_RNA.679-201ENST00000516416 91 ntBASIC-2.16□□□□□ -2.76
TPM1P09493 Y_RNA.57-201ENST00000362806 113 ntBASIC-2.17□□□□□ -2.76
TPM1P09493 Y_RNA.262-201ENST00000364641 102 ntBASIC-2.17□□□□□ -2.76
TPM1P09493 SNORD101-201ENST00000384027 73 ntBASIC-2.17□□□□□ -2.76
TPM1P09493 RNU6-24P-201ENST00000384440 107 ntBASIC-2.17□□□□□ -2.76
TPM1P09493 Y_RNA.711-201ENST00000516993 102 ntBASIC-2.17□□□□□ -2.76
TPM1P09493 snoU83B.1-201ENST00000517136 88 ntBASIC-2.17□□□□□ -2.76
TPM1P09493 RNY1P9-201ENST00000532431 109 ntBASIC-2.17□□□□□ -2.76
TPM1P09493 MTND5P22-201ENST00000458380 195 ntBASIC-2.18□□□□□ -2.76
TPM1P09493 MTND3P22-201ENST00000510932 243 ntBASIC-2.18□□□□□ -2.76
TPM1P09493 RNU6-762P-201ENST00000517107 102 ntBASIC-2.18□□□□□ -2.76
TPM1P09493 RNU6-592P-201ENST00000411333 103 ntBASIC-2.19□□□□□ -2.76
TPM1P09493 SNORD18.2-201ENST00000459604 70 ntBASIC-2.19□□□□□ -2.76
TPM1P09493 FGF7P4-201ENST00000509595 295 ntBASIC-2.19□□□□□ -2.76
TPM1P09493 U2.14-201ENST00000615943 113 ntBASIC-2.19□□□□□ -2.76
TPM1P09493 Y_RNA.579-201ENST00000390939 94 ntBASIC-2.2□□□□□ -2.76
TPM1P09493 MIR4696-201ENST00000581431 70 ntBASIC-2.2□□□□□ -2.76
TPM1P09493 MIR4306-201ENST00000583390 91 ntBASIC-2.2□□□□□ -2.76
TPM1P09493 RNU6-664P-201ENST00000362381 107 ntBASIC-2.21□□□□□ -2.76
TPM1P09493 Y_RNA.78-201ENST00000362970 110 ntBASIC-2.22□□□□□ -2.76
TPM1P09493 Y_RNA.294-201ENST00000364916 102 ntBASIC-2.22□□□□□ -2.76
TPM1P09493 RNU6-54P-201ENST00000365563 107 ntBASIC-2.22□□□□□ -2.76
TPM1P09493 Y_RNA.395-201ENST00000383945 109 ntBASIC-2.22□□□□□ -2.76
TPM1P09493 Y_RNA.797-201ENST00000515977 94 ntBASIC-2.22□□□□□ -2.76
TPM1P09493 Y_RNA.210-201ENST00000364161 110 ntBASIC-2.23□□□□□ -2.77
TPM1P09493 Y_RNA.377-201ENST00000365644 108 ntBASIC-2.23□□□□□ -2.77
TPM1P09493 RNU6-1104P-201ENST00000384723 104 ntBASIC-2.23□□□□□ -2.77
TPM1P09493 RNU6-935P-201ENST00000410371 100 ntBASIC-2.23□□□□□ -2.77
TPM1P09493 Y_RNA.173-201ENST00000363776 113 ntBASIC-2.24□□□□□ -2.77
TPM1P09493 Y_RNA.793-201ENST00000411222 111 ntBASIC-2.24□□□□□ -2.77
TPM1P09493 Y_RNA.677-201ENST00000516401 85 ntBASIC-2.24□□□□□ -2.77
TPM1P09493 RNU6-521P-201ENST00000516663 105 ntBASIC-2.24□□□□□ -2.77
TPM1P09493 MIR6773-201ENST00000612812 74 ntBASIC-2.24□□□□□ -2.77
TPM1P09493 RNU6-235P-201ENST00000362644 107 ntBASIC-2.25□□□□□ -2.77
TPM1P09493 Y_RNA.76-201ENST00000362931 109 ntBASIC-2.25□□□□□ -2.77
TPM1P09493 RNU6-10P-201ENST00000384036 107 ntBASIC-2.25□□□□□ -2.77
TPM1P09493 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-2.25□□□□□ -2.77
TPM1P09493 SNORD115-23-201ENST00000364461 82 ntBASIC-2.26□□□□□ -2.77
TPM1P09493 Y_RNA.248-201ENST00000364501 109 ntBASIC-2.26□□□□□ -2.77
TPM1P09493 SNORD114-17-201ENST00000364699 75 ntBASIC-2.26□□□□□ -2.77
TPM1P09493 RNU6-466P-201ENST00000391224 103 ntBASIC-2.26□□□□□ -2.77
TPM1P09493 RNY4P20-201ENST00000516678 93 ntBASIC-2.27□□□□□ -2.77
TPM1P09493 Y_RNA.121-201ENST00000363309 113 ntBASIC-2.28□□□□□ -2.77
TPM1P09493 RNU6-818P-201ENST00000364837 108 ntBASIC-2.28□□□□□ -2.77
TPM1P09493 Y_RNA.433-201ENST00000384089 102 ntBASIC-2.28□□□□□ -2.77
TPM1P09493 RNY4P3-201ENST00000365254 95 ntBASIC-2.29□□□□□ -2.78
TPM1P09493 Y_RNA.568-201ENST00000384742 113 ntBASIC-2.29□□□□□ -2.78
TPM1P09493 MIRLET7B-201ENST00000385140 83 ntBASIC-2.29□□□□□ -2.78
TPM1P09493 RNU6-588P-201ENST00000410281 105 ntBASIC-2.29□□□□□ -2.78
TPM1P09493 Y_RNA.237-201ENST00000364439 102 ntBASIC-2.3□□□□□ -2.78
TPM1P09493 RNU6-1082P-201ENST00000364574 107 ntBASIC-2.3□□□□□ -2.78
TPM1P09493 U3.27-201ENST00000391237 200 ntBASIC-2.3□□□□□ -2.78
TPM1P09493 SNORD115-19-201ENST00000363098 82 ntBASIC-2.31□□□□□ -2.78
TPM1P09493 SNORD115-18-201ENST00000363293 82 ntBASIC-2.31□□□□□ -2.78
TPM1P09493 SNORD115-17-201ENST00000364612 82 ntBASIC-2.31□□□□□ -2.78
TPM1P09493 RNA5SP395-201ENST00000516567 118 ntBASIC-2.31□□□□□ -2.78
TPM1P09493 Y_RNA.58-201ENST00000362807 102 ntBASIC-2.32□□□□□ -2.78
TPM1P09493 RNY3P1-201ENST00000365085 102 ntBASIC-2.32□□□□□ -2.78
TPM1P09493 SNORA62.4-201ENST00000365504 151 ntBASIC-2.32□□□□□ -2.78
TPM1P09493 MIR451A-201ENST00000385059 72 ntBASIC-2.32□□□□□ -2.78
TPM1P09493 RNU7-6P-201ENST00000516845 62 ntBASIC-2.32□□□□□ -2.78
TPM1P09493 RNA5SP192-201ENST00000364404 120 ntBASIC-2.33□□□□□ -2.78
TPM1P09493 Y_RNA.374-201ENST00000365606 101 ntBASIC-2.33□□□□□ -2.78
TPM1P09493 SNORD42B-201ENST00000458893 67 ntBASIC-2.33□□□□□ -2.78
Retrieved 100 of 98,524 protein–RNA pairs in 191.7 ms