Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 MIR100-201ENST00000385259 80 ntBASIC1.73□□□□□ -2.13
PDGFAP04085 RNU4-62P-201ENST00000410125 130 ntBASIC1.73□□□□□ -2.13
PDGFAP04085 RNU6-321P-201ENST00000410912 106 ntBASIC1.73□□□□□ -2.13
PDGFAP04085 RNU6-977P-201ENST00000516411 103 ntBASIC1.73□□□□□ -2.13
PDGFAP04085 SNORA25.15-201ENST00000516487 89 ntBASIC1.73□□□□□ -2.13
PDGFAP04085 RNU6-638P-201ENST00000516582 104 ntBASIC1.73□□□□□ -2.13
PDGFAP04085 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.73□□□□□ -2.13
PDGFAP04085 MIR1-1-201ENST00000362147 71 ntBASIC1.72□□□□□ -2.13
PDGFAP04085 Y_RNA.283-201ENST00000364798 112 ntBASIC1.72□□□□□ -2.13
PDGFAP04085 MIR1255A-201ENST00000408338 113 ntBASIC1.72□□□□□ -2.13
PDGFAP04085 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.72□□□□□ -2.13
PDGFAP04085 AC092628.1-201ENST00000436250 252 ntBASIC1.72□□□□□ -2.13
PDGFAP04085 Y_RNA.118-201ENST00000363300 101 ntBASIC1.71□□□□□ -2.14
PDGFAP04085 Y_RNA.355-201ENST00000365462 98 ntBASIC1.71□□□□□ -2.14
PDGFAP04085 MIR518E-201ENST00000385252 88 ntBASIC1.71□□□□□ -2.14
PDGFAP04085 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
PDGFAP04085 RNU7-195P-201ENST00000458793 62 ntBASIC1.71□□□□□ -2.14
PDGFAP04085 Y_RNA.809-201ENST00000516058 95 ntBASIC1.71□□□□□ -2.14
PDGFAP04085 MIR4804-201ENST00000581683 73 ntBASIC1.71□□□□□ -2.14
PDGFAP04085 AL645939.4-201ENST00000604495 135 ntBASIC1.71□□□□□ -2.14
PDGFAP04085 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
PDGFAP04085 RNU6-787P-201ENST00000384032 107 ntBASIC1.7□□□□□ -2.14
PDGFAP04085 RNU7-102P-201ENST00000458948 62 ntBASIC1.7□□□□□ -2.14
PDGFAP04085 RNU6-448P-201ENST00000517052 107 ntBASIC1.7□□□□□ -2.14
PDGFAP04085 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.7□□□□□ -2.14
PDGFAP04085 AC138907.6-201ENST00000568401 126 ntBASIC1.7□□□□□ -2.14
PDGFAP04085 AC138869.1-201ENST00000568623 124 ntBASIC1.7□□□□□ -2.14
PDGFAP04085 MIR4303-201ENST00000581299 66 ntBASIC1.7□□□□□ -2.14
PDGFAP04085 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.7□□□□□ -2.14
PDGFAP04085 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.7□□□□□ -2.14
PDGFAP04085 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
PDGFAP04085 RNU6-811P-201ENST00000384069 107 ntBASIC1.69□□□□□ -2.14
PDGFAP04085 RNU1-119P-201ENST00000391122 165 ntBASIC1.69□□□□□ -2.14
PDGFAP04085 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.69□□□□□ -2.14
PDGFAP04085 AP1B1P2-201ENST00000416196 106 ntBASIC1.69□□□□□ -2.14
PDGFAP04085 AC097635.1-201ENST00000450678 155 ntBASIC1.69□□□□□ -2.14
PDGFAP04085 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.69□□□□□ -2.14
PDGFAP04085 RNU6-369P-201ENST00000362515 102 ntBASIC1.68□□□□□ -2.14
PDGFAP04085 RNU6-1260P-201ENST00000362944 107 ntBASIC1.68□□□□□ -2.14
PDGFAP04085 SNORA25.9-201ENST00000365087 128 ntBASIC1.68□□□□□ -2.14
PDGFAP04085 SNORA25-201ENST00000384384 134 ntBASIC1.68□□□□□ -2.14
PDGFAP04085 RNU6-535P-201ENST00000384722 107 ntBASIC1.68□□□□□ -2.14
PDGFAP04085 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
PDGFAP04085 Y_RNA.313-201ENST00000365095 103 ntBASIC1.67□□□□□ -2.14
PDGFAP04085 MIR548U-201ENST00000390728 81 ntBASIC1.67□□□□□ -2.14
PDGFAP04085 MIR1827-201ENST00000408549 66 ntBASIC1.67□□□□□ -2.14
PDGFAP04085 RNA5SP225-201ENST00000410874 135 ntBASIC1.67□□□□□ -2.14
PDGFAP04085 AC002429.1-201ENST00000437672 148 ntBASIC1.67□□□□□ -2.14
PDGFAP04085 AL359821.1-201ENST00000605519 182 ntBASIC1.67□□□□□ -2.14
PDGFAP04085 MIR8070-201ENST00000616510 88 ntBASIC1.67□□□□□ -2.14
PDGFAP04085 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
PDGFAP04085 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
PDGFAP04085 RNU6-957P-201ENST00000363652 99 ntBASIC1.66□□□□□ -2.14
PDGFAP04085 RNU6-652P-201ENST00000365488 107 ntBASIC1.66□□□□□ -2.14
PDGFAP04085 MIR520F-201ENST00000384824 87 ntBASIC1.66□□□□□ -2.14
PDGFAP04085 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
PDGFAP04085 RNU7-56P-201ENST00000458744 62 ntBASIC1.66□□□□□ -2.14
PDGFAP04085 AC140658.3-201ENST00000567603 271 ntBASIC1.66□□□□□ -2.14
PDGFAP04085 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.66□□□□□ -2.14
PDGFAP04085 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
PDGFAP04085 Y_RNA.316-201ENST00000365118 111 ntBASIC1.65□□□□□ -2.15
PDGFAP04085 RNU6-291P-201ENST00000384720 107 ntBASIC1.65□□□□□ -2.15
PDGFAP04085 RNU6-75P-201ENST00000515944 104 ntBASIC1.65□□□□□ -2.15
PDGFAP04085 RNU7-153P-201ENST00000516455 62 ntBASIC1.65□□□□□ -2.15
PDGFAP04085 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.65□□□□□ -2.15
PDGFAP04085 RNA5SP327-201ENST00000362494 101 ntBASIC1.64□□□□□ -2.15
PDGFAP04085 MIR599-201ENST00000385069 95 ntBASIC1.64□□□□□ -2.15
PDGFAP04085 RNU6-279P-201ENST00000391297 101 ntBASIC1.64□□□□□ -2.15
PDGFAP04085 TRMT112P2-201ENST00000512910 132 ntBASIC1.64□□□□□ -2.15
PDGFAP04085 SNORA25.13-201ENST00000516395 103 ntBASIC1.64□□□□□ -2.15
PDGFAP04085 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
PDGFAP04085 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
PDGFAP04085 snoU13.18-201ENST00000459483 104 ntBASIC1.63□□□□□ -2.15
PDGFAP04085 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.63□□□□□ -2.15
PDGFAP04085 MIR4796-201ENST00000580742 81 ntBASIC1.63□□□□□ -2.15
PDGFAP04085 AC104996.3-201ENST00000590718 94 ntBASIC1.63□□□□□ -2.15
PDGFAP04085 AC008608.1-201ENST00000603910 127 ntBASIC1.63□□□□□ -2.15
PDGFAP04085 AL136317.1-201ENST00000612653 226 ntBASIC1.63□□□□□ -2.15
PDGFAP04085 AL157834.3-201ENST00000615543 103 ntBASIC1.63□□□□□ -2.15
PDGFAP04085 TRDV1-202ENST00000621643 102 ntBASIC1.63□□□□□ -2.15
PDGFAP04085 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.63□□□□□ -2.15
PDGFAP04085 SNORA67.5-201ENST00000391036 107 ntBASIC1.62□□□□□ -2.15
PDGFAP04085 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.62□□□□□ -2.15
PDGFAP04085 RNA5SP395-201ENST00000516567 118 ntBASIC1.62□□□□□ -2.15
PDGFAP04085 MIR3064-201ENST00000581130 66 ntBASIC1.62□□□□□ -2.15
PDGFAP04085 RNU6-997P-201ENST00000384725 107 ntBASIC1.61□□□□□ -2.15
PDGFAP04085 RNU7-95P-201ENST00000459222 64 ntBASIC1.61□□□□□ -2.15
PDGFAP04085 RNA5SP363-201ENST00000365072 115 ntBASIC1.6□□□□□ -2.15
PDGFAP04085 Y_RNA.491-201ENST00000384417 107 ntBASIC1.6□□□□□ -2.15
PDGFAP04085 FABP5P4-201ENST00000437203 171 ntBASIC1.6□□□□□ -2.15
PDGFAP04085 MIR4255-201ENST00000579351 72 ntBASIC1.6□□□□□ -2.15
PDGFAP04085 RMST_2.1-201ENST00000617263 136 ntBASIC1.6□□□□□ -2.15
PDGFAP04085 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
PDGFAP04085 Y_RNA.174-201ENST00000363781 105 ntBASIC1.59□□□□□ -2.15
PDGFAP04085 RNU6-132P-201ENST00000383863 107 ntBASIC1.59□□□□□ -2.15
PDGFAP04085 RNA5SP292-201ENST00000390974 118 ntBASIC1.59□□□□□ -2.15
PDGFAP04085 RNU6-857P-201ENST00000515893 110 ntBASIC1.59□□□□□ -2.15
PDGFAP04085 SNORA18.5-201ENST00000516616 101 ntBASIC1.59□□□□□ -2.15
PDGFAP04085 BX248123.2-201ENST00000606318 124 ntBASIC1.59□□□□□ -2.15
PDGFAP04085 MIR502-201ENST00000606349 86 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 230 ms