Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 U6.109-201ENST00000636749 87 ntBASIC1.37□□□□□ -2.19
COL3A1P02461 Y_RNA.30-201ENST00000362572 97 ntBASIC1.37□□□□□ -2.19
COL3A1P02461 SNORD41-201ENST00000386967 70 ntBASIC1.37□□□□□ -2.19
COL3A1P02461 MIR1302-7-201ENST00000408841 72 ntBASIC1.37□□□□□ -2.19
COL3A1P02461 RNU6-380P-201ENST00000410207 107 ntBASIC1.37□□□□□ -2.19
COL3A1P02461 SNRPGP12-201ENST00000449481 213 ntBASIC1.37□□□□□ -2.19
COL3A1P02461 Y_RNA.648-201ENST00000459455 110 ntBASIC1.37□□□□□ -2.19
COL3A1P02461 AC055731.1-201ENST00000474387 401 ntBASIC1.37□□□□□ -2.19
COL3A1P02461 AC139453.2-201ENST00000487255 133 ntBASIC1.37□□□□□ -2.19
COL3A1P02461 AC019176.1-201ENST00000518519 225 ntBASIC1.37□□□□□ -2.19
COL3A1P02461 RN7SL793P-201ENST00000583259 296 ntBASIC1.37□□□□□ -2.19
COL3A1P02461 MIR4536-1-201ENST00000583537 88 ntBASIC1.37□□□□□ -2.19
COL3A1P02461 AC145423.2-201ENST00000610631 239 ntBASIC1.37□□□□□ -2.19
COL3A1P02461 RNA5SP276-201ENST00000362580 94 ntBASIC1.36□□□□□ -2.19
COL3A1P02461 SNORA25.3-201ENST00000363205 127 ntBASIC1.36□□□□□ -2.19
COL3A1P02461 MT-TF-201ENST00000387314 71 ntBASIC1.36□□□□□ -2.19
COL3A1P02461 RNU6-243P-201ENST00000391140 107 ntBASIC1.36□□□□□ -2.19
COL3A1P02461 RNU6-1165P-201ENST00000410119 107 ntBASIC1.36□□□□□ -2.19
COL3A1P02461 RNA5SP233-201ENST00000459153 113 ntBASIC1.36□□□□□ -2.19
COL3A1P02461 AC087343.1-201ENST00000477341 475 ntBASIC1.36□□□□□ -2.19
COL3A1P02461 AL773524.1-201ENST00000614065 229 ntBASIC1.36□□□□□ -2.19
COL3A1P02461 MIR6740-201ENST00000618268 113 ntBASIC1.36□□□□□ -2.19
COL3A1P02461 AC008163.1-202ENST00000636004 2889 ntBASIC1.35□□□□□ -2.19
COL3A1P02461 MIR30D-201ENST00000362283 70 ntBASIC1.35□□□□□ -2.19
COL3A1P02461 SNORA72.6-201ENST00000384520 129 ntBASIC1.35□□□□□ -2.19
COL3A1P02461 RNU6-1254P-201ENST00000391266 104 ntBASIC1.35□□□□□ -2.19
COL3A1P02461 MIR889-201ENST00000401280 79 ntBASIC1.35□□□□□ -2.19
COL3A1P02461 RNU7-62P-201ENST00000458856 62 ntBASIC1.35□□□□□ -2.19
COL3A1P02461 snoU13.11-201ENST00000459219 104 ntBASIC1.35□□□□□ -2.19
COL3A1P02461 RPL30P7-201ENST00000479312 323 ntBASIC1.35□□□□□ -2.19
COL3A1P02461 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
COL3A1P02461 SNORD36A-201ENST00000362874 73 ntBASIC1.34□□□□□ -2.19
COL3A1P02461 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
COL3A1P02461 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
COL3A1P02461 RNU7-85P-201ENST00000458851 63 ntBASIC1.34□□□□□ -2.19
COL3A1P02461 SNORA77B-201ENST00000578179 125 ntBASIC1.34□□□□□ -2.19
COL3A1P02461 AL096840.1-201ENST00000603287 93 ntBASIC1.34□□□□□ -2.19
COL3A1P02461 MIR8074-201ENST00000615081 81 ntBASIC1.34□□□□□ -2.19
COL3A1P02461 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.34□□□□□ -2.19
COL3A1P02461 RNU4-58P-201ENST00000363192 141 ntBASIC1.33□□□□□ -2.2
COL3A1P02461 MIR516A2-201ENST00000384888 90 ntBASIC1.33□□□□□ -2.2
COL3A1P02461 MIR516A1-201ENST00000385033 90 ntBASIC1.33□□□□□ -2.2
COL3A1P02461 RNU6-205P-201ENST00000390858 107 ntBASIC1.33□□□□□ -2.2
COL3A1P02461 RNU6-788P-201ENST00000390967 104 ntBASIC1.33□□□□□ -2.2
COL3A1P02461 MIR18B-201ENST00000454574 71 ntBASIC1.33□□□□□ -2.2
COL3A1P02461 RNU6-811P-201ENST00000384069 107 ntBASIC1.32□□□□□ -2.2
COL3A1P02461 Y_RNA.545-201ENST00000384652 105 ntBASIC1.32□□□□□ -2.2
COL3A1P02461 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
COL3A1P02461 AC244636.1-201ENST00000421152 228 ntBASIC1.32□□□□□ -2.2
COL3A1P02461 AL450471.1-201ENST00000447509 127 ntBASIC1.32□□□□□ -2.2
COL3A1P02461 RNU6-557P-201ENST00000516842 110 ntBASIC1.32□□□□□ -2.2
COL3A1P02461 AC015688.6-201ENST00000577737 104 ntBASIC1.32□□□□□ -2.2
COL3A1P02461 MIR4796-201ENST00000580742 81 ntBASIC1.32□□□□□ -2.2
COL3A1P02461 MIR4491-201ENST00000581087 68 ntBASIC1.32□□□□□ -2.2
COL3A1P02461 SNORA63.2-201ENST00000362603 126 ntBASIC1.31□□□□□ -2.2
COL3A1P02461 Y_RNA.565-201ENST00000384719 101 ntBASIC1.31□□□□□ -2.2
COL3A1P02461 SNORD93-201ENST00000408813 74 ntBASIC1.31□□□□□ -2.2
COL3A1P02461 MIR4713-201ENST00000582691 75 ntBASIC1.31□□□□□ -2.2
COL3A1P02461 AL627230.6-201ENST00000611129 280 ntBASIC1.31□□□□□ -2.2
COL3A1P02461 MIR6516-201ENST00000630554 81 ntBASIC1.31□□□□□ -2.2
COL3A1P02461 RNA5SP264-201ENST00000363115 107 ntBASIC1.31□□□□□ -2.2
COL3A1P02461 RNU6-478P-201ENST00000363904 110 ntBASIC1.31□□□□□ -2.2
COL3A1P02461 RNU6-1229P-201ENST00000364295 107 ntBASIC1.31□□□□□ -2.2
COL3A1P02461 RNU6-686P-201ENST00000364839 107 ntBASIC1.31□□□□□ -2.2
COL3A1P02461 RNU6-580P-201ENST00000365159 107 ntBASIC1.31□□□□□ -2.2
COL3A1P02461 RNU6-439P-201ENST00000384188 106 ntBASIC1.31□□□□□ -2.2
COL3A1P02461 MIR150-201ENST00000385048 84 ntBASIC1.31□□□□□ -2.2
COL3A1P02461 AP003716.2-201ENST00000528260 108 ntBASIC1.31□□□□□ -2.2
COL3A1P02461 MIR4295-201ENST00000585286 85 ntBASIC1.31□□□□□ -2.2
COL3A1P02461 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
COL3A1P02461 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.3□□□□□ -2.2
COL3A1P02461 MIR377-201ENST00000362145 69 ntBASIC1.3□□□□□ -2.2
COL3A1P02461 MIR103A2-201ENST00000362154 78 ntBASIC1.3□□□□□ -2.2
COL3A1P02461 MIR635-201ENST00000384830 98 ntBASIC1.3□□□□□ -2.2
COL3A1P02461 MIR532-201ENST00000385025 91 ntBASIC1.3□□□□□ -2.2
COL3A1P02461 MIR548U-201ENST00000390728 81 ntBASIC1.3□□□□□ -2.2
COL3A1P02461 Y_RNA.660-201ENST00000516002 120 ntBASIC1.3□□□□□ -2.2
COL3A1P02461 SNORA18.5-201ENST00000516616 101 ntBASIC1.3□□□□□ -2.2
COL3A1P02461 RNU6-531P-201ENST00000516694 104 ntBASIC1.3□□□□□ -2.2
COL3A1P02461 MIR4287-201ENST00000579398 78 ntBASIC1.3□□□□□ -2.2
COL3A1P02461 MIR101-2-201ENST00000362195 79 ntBASIC1.29□□□□□ -2.2
COL3A1P02461 SNORD33-201ENST00000362761 85 ntBASIC1.29□□□□□ -2.2
COL3A1P02461 RNU6-403P-201ENST00000363163 104 ntBASIC1.29□□□□□ -2.2
COL3A1P02461 Y_RNA.264-201ENST00000364665 102 ntBASIC1.29□□□□□ -2.2
COL3A1P02461 MIR1185-1-201ENST00000408598 86 ntBASIC1.29□□□□□ -2.2
COL3A1P02461 snoU13.25-201ENST00000458945 104 ntBASIC1.29□□□□□ -2.2
COL3A1P02461 RNU7-106P-201ENST00000459514 67 ntBASIC1.29□□□□□ -2.2
COL3A1P02461 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.29□□□□□ -2.2
COL3A1P02461 SNORD92-201ENST00000585078 85 ntBASIC1.29□□□□□ -2.2
COL3A1P02461 RNU7-10P-201ENST00000607194 63 ntBASIC1.29□□□□□ -2.2
COL3A1P02461 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
COL3A1P02461 MIRLET7A1-201ENST00000362295 80 ntBASIC1.28□□□□□ -2.2
COL3A1P02461 RNU6-161P-201ENST00000363051 106 ntBASIC1.28□□□□□ -2.2
COL3A1P02461 Y_RNA.283-201ENST00000364798 112 ntBASIC1.28□□□□□ -2.2
COL3A1P02461 RNU1-36P-201ENST00000365130 165 ntBASIC1.28□□□□□ -2.2
COL3A1P02461 RNU6-466P-201ENST00000391224 103 ntBASIC1.28□□□□□ -2.2
COL3A1P02461 snoU13.9-201ENST00000458927 103 ntBASIC1.28□□□□□ -2.2
COL3A1P02461 AC079140.2-201ENST00000506193 142 ntBASIC1.28□□□□□ -2.2
COL3A1P02461 RNU6-1194P-201ENST00000516208 104 ntBASIC1.28□□□□□ -2.2
COL3A1P02461 MIR3973-201ENST00000579824 107 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms