Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.18□□□□□ -2.22
RAPGEF3O95398 AC096720.1-201ENST00000604441 183 ntBASIC1.18□□□□□ -2.22
RAPGEF3O95398 AL442128.1-201ENST00000615151 90 ntBASIC1.18□□□□□ -2.22
RAPGEF3O95398 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.18□□□□□ -2.22
RAPGEF3O95398 HSBP1P2-201ENST00000299671 229 ntBASIC1.17□□□□□ -2.22
RAPGEF3O95398 Y_RNA.10-201ENST00000362371 110 ntBASIC1.17□□□□□ -2.22
RAPGEF3O95398 Y_RNA.78-201ENST00000362970 110 ntBASIC1.17□□□□□ -2.22
RAPGEF3O95398 Y_RNA.163-201ENST00000363702 113 ntBASIC1.17□□□□□ -2.22
RAPGEF3O95398 MIR520H-201ENST00000385126 88 ntBASIC1.17□□□□□ -2.22
RAPGEF3O95398 AL035461.1-201ENST00000421490 332 ntBASIC1.17□□□□□ -2.22
RAPGEF3O95398 RNU6-531P-201ENST00000516694 104 ntBASIC1.17□□□□□ -2.22
RAPGEF3O95398 AC090897.1-201ENST00000580909 226 ntBASIC1.17□□□□□ -2.22
RAPGEF3O95398 RNU6-832P-201ENST00000363319 107 ntBASIC1.16□□□□□ -2.22
RAPGEF3O95398 RNU6-755P-201ENST00000364400 103 ntBASIC1.16□□□□□ -2.22
RAPGEF3O95398 SNORA22-201ENST00000383907 134 ntBASIC1.16□□□□□ -2.22
RAPGEF3O95398 RNU6-1113P-201ENST00000384348 107 ntBASIC1.16□□□□□ -2.22
RAPGEF3O95398 MIR577-201ENST00000385196 96 ntBASIC1.16□□□□□ -2.22
RAPGEF3O95398 RNU6-1006P-201ENST00000516998 103 ntBASIC1.16□□□□□ -2.22
RAPGEF3O95398 RNU6-448P-201ENST00000517052 107 ntBASIC1.16□□□□□ -2.22
RAPGEF3O95398 MIR4500-201ENST00000579472 76 ntBASIC1.16□□□□□ -2.22
RAPGEF3O95398 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.15□□□□□ -2.22
RAPGEF3O95398 RNU6-1099P-201ENST00000363533 107 ntBASIC1.15□□□□□ -2.23
RAPGEF3O95398 RNU4-36P-201ENST00000364294 144 ntBASIC1.15□□□□□ -2.23
RAPGEF3O95398 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
RAPGEF3O95398 RNU6-35P-201ENST00000384530 107 ntBASIC1.15□□□□□ -2.23
RAPGEF3O95398 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.15□□□□□ -2.23
RAPGEF3O95398 AC141557.1-201ENST00000540982 400 ntBASIC1.15□□□□□ -2.23
RAPGEF3O95398 AC008608.1-201ENST00000603910 127 ntBASIC1.15□□□□□ -2.23
RAPGEF3O95398 MIR101-2-201ENST00000362195 79 ntBASIC1.14□□□□□ -2.23
RAPGEF3O95398 RNU6-106P-201ENST00000384405 107 ntBASIC1.14□□□□□ -2.23
RAPGEF3O95398 AC013244.2-201ENST00000603396 103 ntBASIC1.14□□□□□ -2.23
RAPGEF3O95398 RNU7-10P-201ENST00000607194 63 ntBASIC1.14□□□□□ -2.23
RAPGEF3O95398 Y_RNA.697-201ENST00000516776 113 ntBASIC1.13□□□□□ -2.23
RAPGEF3O95398 Y_RNA.56-201ENST00000362798 112 ntBASIC1.12□□□□□ -2.23
RAPGEF3O95398 RNU6-1335P-201ENST00000365426 107 ntBASIC1.12□□□□□ -2.23
RAPGEF3O95398 RNU6-571P-201ENST00000384128 107 ntBASIC1.12□□□□□ -2.23
RAPGEF3O95398 MTND5P40-201ENST00000559945 246 ntBASIC1.12□□□□□ -2.23
RAPGEF3O95398 MIR548H5-201ENST00000580314 60 ntBASIC1.12□□□□□ -2.23
RAPGEF3O95398 RNU6-90P-201ENST00000606352 106 ntBASIC1.12□□□□□ -2.23
RAPGEF3O95398 Y_RNA.536-201ENST00000384621 113 ntBASIC1.11□□□□□ -2.23
RAPGEF3O95398 MIR573-201ENST00000384964 99 ntBASIC1.11□□□□□ -2.23
RAPGEF3O95398 SNORD100-201ENST00000408573 76 ntBASIC1.11□□□□□ -2.23
RAPGEF3O95398 RNU6-554P-201ENST00000410466 106 ntBASIC1.11□□□□□ -2.23
RAPGEF3O95398 AC098934.3-201ENST00000430450 190 ntBASIC1.11□□□□□ -2.23
RAPGEF3O95398 RNU6-351P-201ENST00000516097 100 ntBASIC1.11□□□□□ -2.23
RAPGEF3O95398 AL353765.1-201ENST00000605514 183 ntBASIC1.11□□□□□ -2.23
RAPGEF3O95398 RNA5SP499-201ENST00000363982 119 ntBASIC1.1□□□□□ -2.23
RAPGEF3O95398 MIR548G-201ENST00000408442 89 ntBASIC1.1□□□□□ -2.23
RAPGEF3O95398 SNORD99-201ENST00000408612 74 ntBASIC1.1□□□□□ -2.23
RAPGEF3O95398 Y_RNA.601-201ENST00000410500 113 ntBASIC1.1□□□□□ -2.23
RAPGEF3O95398 SNRPGP12-201ENST00000449481 213 ntBASIC1.1□□□□□ -2.23
RAPGEF3O95398 MIR4439-201ENST00000583746 80 ntBASIC1.1□□□□□ -2.23
RAPGEF3O95398 uc_338.28-201ENST00000612082 187 ntBASIC1.1□□□□□ -2.23
RAPGEF3O95398 RNA5SP347-201ENST00000362445 119 ntBASIC1.09□□□□□ -2.23
RAPGEF3O95398 Y_RNA.174-201ENST00000363781 105 ntBASIC1.09□□□□□ -2.23
RAPGEF3O95398 SNORD45B-201ENST00000364617 72 ntBASIC1.09□□□□□ -2.23
RAPGEF3O95398 AL031737.1-201ENST00000450125 223 ntBASIC1.09□□□□□ -2.23
RAPGEF3O95398 AC002350.1-201ENST00000490759 375 ntBASIC1.09□□□□□ -2.23
RAPGEF3O95398 RNU6-904P-201ENST00000516206 101 ntBASIC1.09□□□□□ -2.23
RAPGEF3O95398 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.09□□□□□ -2.23
RAPGEF3O95398 SNORD114-2-201ENST00000363953 78 ntBASIC1.08□□□□□ -2.24
RAPGEF3O95398 SPINT5P-201ENST00000448174 155 ntBASIC1.08□□□□□ -2.24
RAPGEF3O95398 AC103810.9-201ENST00000606688 112 ntBASIC1.08□□□□□ -2.24
RAPGEF3O95398 RNU6-766P-201ENST00000362478 107 ntBASIC1.07□□□□□ -2.24
RAPGEF3O95398 Y_RNA.247-201ENST00000364500 92 ntBASIC1.07□□□□□ -2.24
RAPGEF3O95398 RNA5SP117-201ENST00000365294 118 ntBASIC1.07□□□□□ -2.24
RAPGEF3O95398 RNU4-45P-201ENST00000365469 141 ntBASIC1.07□□□□□ -2.24
RAPGEF3O95398 RNU6-44P-201ENST00000384045 107 ntBASIC1.07□□□□□ -2.24
RAPGEF3O95398 SNORA51.5-201ENST00000384126 131 ntBASIC1.07□□□□□ -2.24
RAPGEF3O95398 RNU6-535P-201ENST00000384722 107 ntBASIC1.07□□□□□ -2.24
RAPGEF3O95398 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.07□□□□□ -2.24
RAPGEF3O95398 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.07□□□□□ -2.24
RAPGEF3O95398 AC243829.3-201ENST00000622177 108 ntBASIC1.07□□□□□ -2.24
RAPGEF3O95398 Y_RNA.173-201ENST00000363776 113 ntBASIC1.06□□□□□ -2.24
RAPGEF3O95398 RNU6-1187P-201ENST00000364771 110 ntBASIC1.06□□□□□ -2.24
RAPGEF3O95398 RNU6-756P-201ENST00000383997 107 ntBASIC1.06□□□□□ -2.24
RAPGEF3O95398 RNU6-291P-201ENST00000384720 107 ntBASIC1.06□□□□□ -2.24
RAPGEF3O95398 MIR608-201ENST00000384820 100 ntBASIC1.06□□□□□ -2.24
RAPGEF3O95398 MIR635-201ENST00000384830 98 ntBASIC1.06□□□□□ -2.24
RAPGEF3O95398 BX276092.1-201ENST00000427368 251 ntBASIC1.06□□□□□ -2.24
RAPGEF3O95398 Y_RNA.659-201ENST00000515994 113 ntBASIC1.06□□□□□ -2.24
RAPGEF3O95398 Y_RNA.818-201ENST00000618813 71 ntBASIC1.06□□□□□ -2.24
RAPGEF3O95398 RNU6-170P-201ENST00000362832 104 ntBASIC1.05□□□□□ -2.24
RAPGEF3O95398 AC244098.3-201ENST00000424803 96 ntBASIC1.05□□□□□ -2.24
RAPGEF3O95398 SCARNA23-201ENST00000516060 130 ntBASIC1.05□□□□□ -2.24
RAPGEF3O95398 RNU6-135P-201ENST00000516769 101 ntBASIC1.05□□□□□ -2.24
RAPGEF3O95398 RNU6-850P-201ENST00000516934 103 ntBASIC1.05□□□□□ -2.24
RAPGEF3O95398 AC138869.1-201ENST00000568623 124 ntBASIC1.05□□□□□ -2.24
RAPGEF3O95398 AC011195.1-201ENST00000578177 177 ntBASIC1.05□□□□□ -2.24
RAPGEF3O95398 MIR3612-201ENST00000579753 87 ntBASIC1.04□□□□□ -2.24
RAPGEF3O95398 uc_338.16-201ENST00000621804 95 ntBASIC1.04□□□□□ -2.24
RAPGEF3O95398 MIR6866-201ENST00000638146 69 ntBASIC1.04□□□□□ -2.24
RAPGEF3O95398 SNORA63.4-201ENST00000362763 126 ntBASIC1.03□□□□□ -2.24
RAPGEF3O95398 Y_RNA.81-201ENST00000362997 102 ntBASIC1.03□□□□□ -2.24
RAPGEF3O95398 Y_RNA.342-201ENST00000365352 113 ntBASIC1.03□□□□□ -2.24
RAPGEF3O95398 Y_RNA.567-201ENST00000384736 106 ntBASIC1.03□□□□□ -2.24
RAPGEF3O95398 MIR519A1-201ENST00000385257 85 ntBASIC1.03□□□□□ -2.24
RAPGEF3O95398 AC092628.1-201ENST00000436250 252 ntBASIC1.03□□□□□ -2.24
RAPGEF3O95398 MIR3613-201ENST00000579844 87 ntBASIC1.03□□□□□ -2.24
RAPGEF3O95398 Y_RNA.95-201ENST00000363079 95 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 225 ms