Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 Y_RNA.362-201ENST00000365518 110 ntBASIC0.06□□□□□ -2.4
MBD4O95243 SNORA2A-201ENST00000383885 135 ntBASIC0.06□□□□□ -2.4
MBD4O95243 RNU6-127P-201ENST00000390897 107 ntBASIC0.06□□□□□ -2.4
MBD4O95243 RNA5SP136-201ENST00000410906 107 ntBASIC0.06□□□□□ -2.4
MBD4O95243 RNU7-195P-201ENST00000458793 62 ntBASIC0.06□□□□□ -2.4
MBD4O95243 RPL39P34-201ENST00000477141 156 ntBASIC0.06□□□□□ -2.4
MBD4O95243 RNU6-426P-201ENST00000516464 97 ntBASIC0.06□□□□□ -2.4
MBD4O95243 MIR4768-201ENST00000585270 74 ntBASIC0.06□□□□□ -2.4
MBD4O95243 MIR499B-201ENST00000636498 73 ntBASIC0.06□□□□□ -2.4
MBD4O95243 RNU6-170P-201ENST00000362832 104 ntBASIC0.05□□□□□ -2.4
MBD4O95243 Y_RNA.85-201ENST00000363014 111 ntBASIC0.05□□□□□ -2.4
MBD4O95243 Y_RNA.213-201ENST00000364178 111 ntBASIC0.05□□□□□ -2.4
MBD4O95243 SNORD114-9-201ENST00000364370 72 ntBASIC0.05□□□□□ -2.4
MBD4O95243 RNA5SP128-201ENST00000365305 116 ntBASIC0.05□□□□□ -2.4
MBD4O95243 Y_RNA.488-201ENST00000384403 102 ntBASIC0.05□□□□□ -2.4
MBD4O95243 SNORD41.1-201ENST00000391000 69 ntBASIC0.05□□□□□ -2.4
MBD4O95243 RNU6-1234P-201ENST00000516877 103 ntBASIC0.05□□□□□ -2.4
MBD4O95243 AC104408.1-201ENST00000605241 170 ntBASIC0.05□□□□□ -2.4
MBD4O95243 SNORA70.25-201ENST00000612741 95 ntBASIC0.05□□□□□ -2.4
MBD4O95243 RNU6-235P-201ENST00000362644 107 ntBASIC0.04□□□□□ -2.4
MBD4O95243 Y_RNA.170-201ENST00000363746 110 ntBASIC0.04□□□□□ -2.4
MBD4O95243 MIR759-201ENST00000390224 91 ntBASIC0.04□□□□□ -2.4
MBD4O95243 RNU6-269P-201ENST00000391077 97 ntBASIC0.04□□□□□ -2.4
MBD4O95243 RNU7-106P-201ENST00000459514 67 ntBASIC0.04□□□□□ -2.4
MBD4O95243 RNU6-850P-201ENST00000516934 103 ntBASIC0.04□□□□□ -2.4
MBD4O95243 MIR371B-201ENST00000638082 66 ntBASIC0.04□□□□□ -2.4
MBD4O95243 Y_RNA.528-201ENST00000384575 108 ntBASIC0.03□□□□□ -2.4
MBD4O95243 Y_RNA.555-201ENST00000384673 110 ntBASIC0.03□□□□□ -2.4
MBD4O95243 MIR519A1-201ENST00000385257 85 ntBASIC0.03□□□□□ -2.4
MBD4O95243 MIR643-201ENST00000385267 97 ntBASIC0.03□□□□□ -2.4
MBD4O95243 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.03□□□□□ -2.4
MBD4O95243 SNORA7.5-201ENST00000410672 110 ntBASIC0.03□□□□□ -2.4
MBD4O95243 Y_RNA.809-201ENST00000516058 95 ntBASIC0.03□□□□□ -2.4
MBD4O95243 RNU6-794P-201ENST00000517261 64 ntBASIC0.03□□□□□ -2.4
MBD4O95243 MIR4667-201ENST00000578933 66 ntBASIC0.03□□□□□ -2.4
MBD4O95243 RNU6-571P-201ENST00000384128 107 ntBASIC0.02□□□□□ -2.41
MBD4O95243 MIR548D2-201ENST00000384955 97 ntBASIC0.02□□□□□ -2.41
MBD4O95243 Y_RNA.660-201ENST00000516002 120 ntBASIC0.02□□□□□ -2.41
MBD4O95243 RNU7-200P-201ENST00000516105 62 ntBASIC0.02□□□□□ -2.41
MBD4O95243 MIR5190-201ENST00000581537 80 ntBASIC0.02□□□□□ -2.41
MBD4O95243 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.02□□□□□ -2.41
MBD4O95243 SNORD114-5-201ENST00000362928 70 ntBASIC0.01□□□□□ -2.41
MBD4O95243 Y_RNA.342-201ENST00000365352 113 ntBASIC0.01□□□□□ -2.41
MBD4O95243 RNU6-524P-201ENST00000384270 107 ntBASIC0.01□□□□□ -2.41
MBD4O95243 MTND4LP9-201ENST00000427694 174 ntBASIC0.01□□□□□ -2.41
MBD4O95243 Y_RNA.35-201ENST00000362601 101 ntBASIC0□□□□□ -2.41
MBD4O95243 RNU6-1260P-201ENST00000362944 107 ntBASIC0□□□□□ -2.41
MBD4O95243 Y_RNA.180-201ENST00000363867 113 ntBASIC0□□□□□ -2.41
MBD4O95243 Y_RNA.323-201ENST00000365157 109 ntBASIC0□□□□□ -2.41
MBD4O95243 Y_RNA.344-201ENST00000365381 112 ntBASIC0□□□□□ -2.41
MBD4O95243 MIR516A2-201ENST00000384888 90 ntBASIC0□□□□□ -2.41
MBD4O95243 MIR516A1-201ENST00000385033 90 ntBASIC0□□□□□ -2.41
MBD4O95243 MIR610-201ENST00000385139 96 ntBASIC0□□□□□ -2.41
MBD4O95243 MIR501-201ENST00000390204 84 ntBASIC0□□□□□ -2.41
MBD4O95243 RNU6-1265P-201ENST00000516342 103 ntBASIC0□□□□□ -2.41
MBD4O95243 RNU6-1061P-201ENST00000516530 99 ntBASIC0□□□□□ -2.41
MBD4O95243 RNU6-255P-201ENST00000516957 105 ntBASIC0□□□□□ -2.41
MBD4O95243 RNU6-1006P-201ENST00000516998 103 ntBASIC0□□□□□ -2.41
MBD4O95243 MIR3920-201ENST00000581751 86 ntBASIC0□□□□□ -2.41
MBD4O95243 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.01□□□□□ -2.41
MBD4O95243 SNORD38.2-201ENST00000384470 69 ntBASIC-0.01□□□□□ -2.41
MBD4O95243 MIR548H2-201ENST00000408874 88 ntBASIC-0.01□□□□□ -2.41
MBD4O95243 AL353813.1-201ENST00000440700 253 ntBASIC-0.01□□□□□ -2.41
MBD4O95243 RNU7-13P-201ENST00000516413 62 ntBASIC-0.01□□□□□ -2.41
MBD4O95243 MTND5P40-201ENST00000559945 246 ntBASIC-0.01□□□□□ -2.41
MBD4O95243 uc_338.28-201ENST00000612082 187 ntBASIC-0.01□□□□□ -2.41
MBD4O95243 AC025166.1-201ENST00000612411 163 ntBASIC-0.01□□□□□ -2.41
MBD4O95243 RNU6-363P-201ENST00000362895 105 ntBASIC-0.02□□□□□ -2.41
MBD4O95243 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.02□□□□□ -2.41
MBD4O95243 SNORD58C-201ENST00000365223 64 ntBASIC-0.02□□□□□ -2.41
MBD4O95243 MIR593-201ENST00000384856 100 ntBASIC-0.02□□□□□ -2.41
MBD4O95243 RNU6-346P-201ENST00000516288 111 ntBASIC-0.02□□□□□ -2.41
MBD4O95243 RNU6-782P-201ENST00000516852 104 ntBASIC-0.02□□□□□ -2.41
MBD4O95243 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.02□□□□□ -2.41
MBD4O95243 MIR5706-201ENST00000579841 80 ntBASIC-0.02□□□□□ -2.41
MBD4O95243 MIR4290-201ENST00000583807 95 ntBASIC-0.02□□□□□ -2.41
MBD4O95243 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.02□□□□□ -2.41
MBD4O95243 AL512310.12-203ENST00000640543 90 ntBASIC-0.02□□□□□ -2.41
MBD4O95243 AC073869.9-201ENST00000641610 120 ntBASIC-0.02□□□□□ -2.41
MBD4O95243 MTND5P18-201ENST00000445624 1801 ntBASIC-0.03□□□□□ -2.41
MBD4O95243 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.03□□□□□ -2.41
MBD4O95243 SNORD114-16-201ENST00000363044 70 ntBASIC-0.03□□□□□ -2.41
MBD4O95243 MIR145-201ENST00000384967 88 ntBASIC-0.03□□□□□ -2.41
MBD4O95243 RNU6-257P-201ENST00000410238 98 ntBASIC-0.03□□□□□ -2.41
MBD4O95243 SPINT5P-201ENST00000448174 155 ntBASIC-0.03□□□□□ -2.41
MBD4O95243 NAMPTP3-201ENST00000569273 224 ntBASIC-0.03□□□□□ -2.41
MBD4O95243 MIR548AD-201ENST00000584780 82 ntBASIC-0.03□□□□□ -2.41
MBD4O95243 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.03□□□□□ -2.41
MBD4O95243 RNA5SP257-201ENST00000363023 116 ntBASIC-0.04□□□□□ -2.42
MBD4O95243 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.04□□□□□ -2.42
MBD4O95243 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.04□□□□□ -2.42
MBD4O95243 SNORA40-201ENST00000388090 126 ntBASIC-0.04□□□□□ -2.42
MBD4O95243 MIR892B-201ENST00000401279 77 ntBASIC-0.04□□□□□ -2.42
MBD4O95243 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.04□□□□□ -2.42
MBD4O95243 RNA5SP484-201ENST00000458857 111 ntBASIC-0.04□□□□□ -2.42
MBD4O95243 U7.6-201ENST00000610841 64 ntBASIC-0.04□□□□□ -2.42
MBD4O95243 RNY4P6-201ENST00000363667 96 ntBASIC-0.05□□□□□ -2.42
MBD4O95243 RNU6-409P-201ENST00000384114 104 ntBASIC-0.05□□□□□ -2.42
MBD4O95243 SNORD110-201ENST00000408189 75 ntBASIC-0.05□□□□□ -2.42
MBD4O95243 AC006210.1-201ENST00000424882 111 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 172.5 ms