Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 RNY4P28-201ENST00000365281 93 ntBASIC-0.93□□□□□ -2.56
UPK1BO75841 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.93□□□□□ -2.56
UPK1BO75841 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.93□□□□□ -2.56
UPK1BO75841 AL161932.1-201ENST00000437408 146 ntBASIC-0.93□□□□□ -2.56
UPK1BO75841 MIR4801-201ENST00000582704 82 ntBASIC-0.93□□□□□ -2.56
UPK1BO75841 MIR8062-201ENST00000621515 85 ntBASIC-0.93□□□□□ -2.56
UPK1BO75841 MIR20A-201ENST00000362279 71 ntBASIC-0.94□□□□□ -2.56
UPK1BO75841 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.94□□□□□ -2.56
UPK1BO75841 RNU6-901P-201ENST00000384593 106 ntBASIC-0.94□□□□□ -2.56
UPK1BO75841 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.94□□□□□ -2.56
UPK1BO75841 RNY4P20-201ENST00000516678 93 ntBASIC-0.94□□□□□ -2.56
UPK1BO75841 TRDV1-202ENST00000621643 102 ntBASIC-0.94□□□□□ -2.56
UPK1BO75841 U6.104-201ENST00000637979 90 ntBASIC-0.94□□□□□ -2.56
UPK1BO75841 Y_RNA.202-201ENST00000364083 110 ntBASIC-0.95□□□□□ -2.56
UPK1BO75841 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.95□□□□□ -2.56
UPK1BO75841 MIR204-201ENST00000385200 110 ntBASIC-0.95□□□□□ -2.56
UPK1BO75841 MIR652-201ENST00000385278 98 ntBASIC-0.95□□□□□ -2.56
UPK1BO75841 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.95□□□□□ -2.56
UPK1BO75841 MTATP8P1-201ENST00000467115 207 ntBASIC-0.95□□□□□ -2.56
UPK1BO75841 RNU6-758P-201ENST00000516292 89 ntBASIC-0.95□□□□□ -2.56
UPK1BO75841 AC108676.2-201ENST00000605225 163 ntBASIC-0.95□□□□□ -2.56
UPK1BO75841 U6.100-201ENST00000636230 99 ntBASIC-0.95□□□□□ -2.56
UPK1BO75841 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.96□□□□□ -2.56
UPK1BO75841 SNORD56B-201ENST00000384713 71 ntBASIC-0.96□□□□□ -2.56
UPK1BO75841 Z95118.1-201ENST00000421372 247 ntBASIC-0.96□□□□□ -2.56
UPK1BO75841 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.97□□□□□ -2.56
UPK1BO75841 SNORD95.1-201ENST00000364099 68 ntBASIC-0.97□□□□□ -2.56
UPK1BO75841 SNORA33.2-201ENST00000365413 134 ntBASIC-0.97□□□□□ -2.56
UPK1BO75841 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.97□□□□□ -2.56
UPK1BO75841 RNU6-900P-201ENST00000384498 102 ntBASIC-0.97□□□□□ -2.56
UPK1BO75841 Y_RNA.518-201ENST00000384552 113 ntBASIC-0.97□□□□□ -2.56
UPK1BO75841 SNORD83B-201ENST00000386745 93 ntBASIC-0.97□□□□□ -2.56
UPK1BO75841 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.97□□□□□ -2.56
UPK1BO75841 RNU6-588P-201ENST00000410281 105 ntBASIC-0.97□□□□□ -2.56
UPK1BO75841 MIR3149-201ENST00000584629 83 ntBASIC-0.97□□□□□ -2.56
UPK1BO75841 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.97□□□□□ -2.56
UPK1BO75841 SNORD27-201ENST00000363981 72 ntBASIC-0.98□□□□□ -2.57
UPK1BO75841 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.98□□□□□ -2.57
UPK1BO75841 RNU6-309P-201ENST00000364573 106 ntBASIC-0.98□□□□□ -2.57
UPK1BO75841 RNU6-639P-201ENST00000384074 107 ntBASIC-0.98□□□□□ -2.57
UPK1BO75841 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.98□□□□□ -2.57
UPK1BO75841 RNU6-243P-201ENST00000391140 107 ntBASIC-0.99□□□□□ -2.57
UPK1BO75841 SNORA75.5-201ENST00000391291 81 ntBASIC-0.99□□□□□ -2.57
UPK1BO75841 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.99□□□□□ -2.57
UPK1BO75841 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.99□□□□□ -2.57
UPK1BO75841 Y_RNA.626-201ENST00000411288 95 ntBASIC-0.99□□□□□ -2.57
UPK1BO75841 AC244090.1-201ENST00000441884 93 ntBASIC-0.99□□□□□ -2.57
UPK1BO75841 SPINT5P-201ENST00000448174 155 ntBASIC-0.99□□□□□ -2.57
UPK1BO75841 RNU6-521P-201ENST00000516663 105 ntBASIC-0.99□□□□□ -2.57
UPK1BO75841 RNU7-6P-201ENST00000516845 62 ntBASIC-0.99□□□□□ -2.57
UPK1BO75841 MIR4280-201ENST00000582178 76 ntBASIC-0.99□□□□□ -2.57
UPK1BO75841 U4.1-201ENST00000620349 87 ntBASIC-0.99□□□□□ -2.57
UPK1BO75841 MIR6844-201ENST00000637122 62 ntBASIC-0.99□□□□□ -2.57
UPK1BO75841 SNORD18B-201ENST00000365659 72 ntBASIC-1□□□□□ -2.57
UPK1BO75841 RNU6-1062P-201ENST00000383908 107 ntBASIC-1□□□□□ -2.57
UPK1BO75841 Y_RNA.396-201ENST00000383949 103 ntBASIC-1□□□□□ -2.57
UPK1BO75841 SNORD38.2-201ENST00000384470 69 ntBASIC-1□□□□□ -2.57
UPK1BO75841 RNU2-38P-201ENST00000410856 79 ntBASIC-1□□□□□ -2.57
UPK1BO75841 MTND2P23-201ENST00000422990 651 ntBASIC-1□□□□□ -2.57
UPK1BO75841 snoU13.13-201ENST00000458842 104 ntBASIC-1□□□□□ -2.57
UPK1BO75841 RNU6-138P-201ENST00000515952 107 ntBASIC-1□□□□□ -2.57
UPK1BO75841 SNORD38.3-201ENST00000516599 73 ntBASIC-1□□□□□ -2.57
UPK1BO75841 AC007012.1-201ENST00000567192 175 ntBASIC-1□□□□□ -2.57
UPK1BO75841 Y_RNA.773-201ENST00000607168 90 ntBASIC-1□□□□□ -2.57
UPK1BO75841 AL137067.1-201ENST00000615933 120 ntBASIC-1□□□□□ -2.57
UPK1BO75841 SNORD36A-201ENST00000362874 73 ntBASIC-1.01□□□□□ -2.57
UPK1BO75841 RNY1P11-201ENST00000363759 113 ntBASIC-1.01□□□□□ -2.57
UPK1BO75841 SNORD127-201ENST00000458892 86 ntBASIC-1.01□□□□□ -2.57
UPK1BO75841 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.01□□□□□ -2.57
UPK1BO75841 AC108081.1-201ENST00000604358 221 ntBASIC-1.01□□□□□ -2.57
UPK1BO75841 RNU6-86P-201ENST00000606534 107 ntBASIC-1.01□□□□□ -2.57
UPK1BO75841 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.02□□□□□ -2.57
UPK1BO75841 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.02□□□□□ -2.57
UPK1BO75841 Y_RNA.535-201ENST00000384612 99 ntBASIC-1.02□□□□□ -2.57
UPK1BO75841 SNORA49-201ENST00000386157 136 ntBASIC-1.02□□□□□ -2.57
UPK1BO75841 AC107027.2-201ENST00000512197 115 ntBASIC-1.02□□□□□ -2.57
UPK1BO75841 SCARNA17-201ENST00000516183 144 ntBASIC-1.02□□□□□ -2.57
UPK1BO75841 Y_RNA.690-201ENST00000516603 95 ntBASIC-1.02□□□□□ -2.57
UPK1BO75841 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.02□□□□□ -2.57
UPK1BO75841 RNU6-957P-201ENST00000363652 99 ntBASIC-1.03□□□□□ -2.57
UPK1BO75841 RNA5SP368-201ENST00000364298 116 ntBASIC-1.03□□□□□ -2.57
UPK1BO75841 Y_RNA.337-201ENST00000365312 102 ntBASIC-1.03□□□□□ -2.57
UPK1BO75841 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-1.03□□□□□ -2.57
UPK1BO75841 AC021146.6-201ENST00000514659 117 ntBASIC-1.03□□□□□ -2.57
UPK1BO75841 Y_RNA.686-201ENST00000516548 134 ntBASIC-1.03□□□□□ -2.57
UPK1BO75841 IGKV1-22-201ENST00000524313 326 ntBASIC-1.03□□□□□ -2.57
UPK1BO75841 AC145423.2-201ENST00000610631 239 ntBASIC-1.03□□□□□ -2.57
UPK1BO75841 SNORD115-25-201ENST00000362619 82 ntBASIC-1.04□□□□□ -2.58
UPK1BO75841 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.04□□□□□ -2.58
UPK1BO75841 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.04□□□□□ -2.58
UPK1BO75841 Y_RNA.574-201ENST00000384766 95 ntBASIC-1.04□□□□□ -2.58
UPK1BO75841 MT-TI-201ENST00000387365 69 ntBASIC-1.05□□□□□ -2.58
UPK1BO75841 MIR548H3-201ENST00000408771 118 ntBASIC-1.05□□□□□ -2.58
UPK1BO75841 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.05□□□□□ -2.58
UPK1BO75841 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.05□□□□□ -2.58
UPK1BO75841 MIR6851-201ENST00000617060 67 ntBASIC-1.05□□□□□ -2.58
UPK1BO75841 Y_RNA.274-201ENST00000364714 101 ntBASIC-1.06□□□□□ -2.58
UPK1BO75841 RNU7-55P-201ENST00000459426 62 ntBASIC-1.06□□□□□ -2.58
UPK1BO75841 RNU6-881P-201ENST00000516813 102 ntBASIC-1.06□□□□□ -2.58
UPK1BO75841 MTRNR2L2-201ENST00000604882 87 ntBASIC-1.06□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 173.5 ms