Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AL035470.1-201ENST00000622571 220 ntBASIC0.32□□□□□ -2.36
GPC4O75487 AC090625.1-201ENST00000357130 210 ntBASIC0.31□□□□□ -2.36
GPC4O75487 MIR539-201ENST00000365690 78 ntBASIC0.31□□□□□ -2.36
GPC4O75487 SNORD63B-201ENST00000411005 70 ntBASIC0.31□□□□□ -2.36
GPC4O75487 AC244505.6-201ENST00000452829 130 ntBASIC0.31□□□□□ -2.36
GPC4O75487 RNU7-106P-201ENST00000459514 67 ntBASIC0.31□□□□□ -2.36
GPC4O75487 RNU6-850P-201ENST00000516934 103 ntBASIC0.31□□□□□ -2.36
GPC4O75487 RNU7-161P-201ENST00000517289 62 ntBASIC0.31□□□□□ -2.36
GPC4O75487 AC138869.1-201ENST00000568623 124 ntBASIC0.31□□□□□ -2.36
GPC4O75487 AC091304.10-201ENST00000641554 121 ntBASIC0.31□□□□□ -2.36
GPC4O75487 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
GPC4O75487 RNA5SP62-201ENST00000363457 110 ntBASIC0.3□□□□□ -2.36
GPC4O75487 Y_RNA.362-201ENST00000365518 110 ntBASIC0.3□□□□□ -2.36
GPC4O75487 MIR516A2-201ENST00000384888 90 ntBASIC0.3□□□□□ -2.36
GPC4O75487 MIR516A1-201ENST00000385033 90 ntBASIC0.3□□□□□ -2.36
GPC4O75487 RNU2-59P-201ENST00000410482 191 ntBASIC0.3□□□□□ -2.36
GPC4O75487 AC073261.1-201ENST00000429409 121 ntBASIC0.3□□□□□ -2.36
GPC4O75487 AL353813.1-201ENST00000440700 253 ntBASIC0.3□□□□□ -2.36
GPC4O75487 RNU6-863P-201ENST00000515989 104 ntBASIC0.3□□□□□ -2.36
GPC4O75487 RNA5SP134-201ENST00000516492 96 ntBASIC0.3□□□□□ -2.36
GPC4O75487 RNY4P6-201ENST00000363667 96 ntBASIC0.29□□□□□ -2.36
GPC4O75487 RNU6-1327P-201ENST00000365302 105 ntBASIC0.29□□□□□ -2.36
GPC4O75487 Y_RNA.346-201ENST00000365385 112 ntBASIC0.29□□□□□ -2.36
GPC4O75487 RNU6-815P-201ENST00000384080 113 ntBASIC0.29□□□□□ -2.36
GPC4O75487 RNU6-409P-201ENST00000384114 104 ntBASIC0.29□□□□□ -2.36
GPC4O75487 Y_RNA.649-201ENST00000459077 103 ntBASIC0.29□□□□□ -2.36
GPC4O75487 MIR6755-201ENST00000619993 66 ntBASIC0.29□□□□□ -2.36
GPC4O75487 RNU6-704P-201ENST00000364162 103 ntBASIC0.28□□□□□ -2.36
GPC4O75487 Y_RNA.261-201ENST00000364631 102 ntBASIC0.28□□□□□ -2.36
GPC4O75487 RNU6-746P-201ENST00000384112 109 ntBASIC0.28□□□□□ -2.36
GPC4O75487 RNU6-80P-201ENST00000384195 107 ntBASIC0.28□□□□□ -2.36
GPC4O75487 RNU6-524P-201ENST00000384270 107 ntBASIC0.28□□□□□ -2.36
GPC4O75487 Y_RNA.507-201ENST00000384500 99 ntBASIC0.28□□□□□ -2.36
GPC4O75487 MIR548M-201ENST00000408260 86 ntBASIC0.28□□□□□ -2.36
GPC4O75487 AL161932.1-201ENST00000437408 146 ntBASIC0.28□□□□□ -2.36
GPC4O75487 Y_RNA.809-201ENST00000516058 95 ntBASIC0.28□□□□□ -2.36
GPC4O75487 RNU6-170P-201ENST00000362832 104 ntBASIC0.27□□□□□ -2.37
GPC4O75487 RNU6-363P-201ENST00000362895 105 ntBASIC0.27□□□□□ -2.37
GPC4O75487 MIR193B-201ENST00000384907 83 ntBASIC0.27□□□□□ -2.37
GPC4O75487 MIR548I2-201ENST00000408348 149 ntBASIC0.27□□□□□ -2.37
GPC4O75487 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.27□□□□□ -2.37
GPC4O75487 RNU6-1333P-201ENST00000516162 93 ntBASIC0.27□□□□□ -2.37
GPC4O75487 AC007012.1-201ENST00000567192 175 ntBASIC0.27□□□□□ -2.37
GPC4O75487 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.27□□□□□ -2.37
GPC4O75487 RNU7-10P-201ENST00000607194 63 ntBASIC0.27□□□□□ -2.37
GPC4O75487 MIR548A3-201ENST00000385297 97 ntBASIC0.26□□□□□ -2.37
GPC4O75487 RNU6-1232P-201ENST00000516299 86 ntBASIC0.26□□□□□ -2.37
GPC4O75487 RNA5SP403-201ENST00000363598 108 ntBASIC0.25□□□□□ -2.37
GPC4O75487 RNU6-726P-201ENST00000364680 107 ntBASIC0.25□□□□□ -2.37
GPC4O75487 RNU6-1126P-201ENST00000384002 107 ntBASIC0.25□□□□□ -2.37
GPC4O75487 Y_RNA.466-201ENST00000384294 113 ntBASIC0.25□□□□□ -2.37
GPC4O75487 SNORD38.2-201ENST00000384470 69 ntBASIC0.25□□□□□ -2.37
GPC4O75487 RNU6-659P-201ENST00000516454 104 ntBASIC0.25□□□□□ -2.37
GPC4O75487 AC067863.3-201ENST00000624172 122 ntBASIC0.25□□□□□ -2.37
GPC4O75487 AL162726.3-218ENST00000636401 95 ntBASIC0.25□□□□□ -2.37
GPC4O75487 MIR3914-2-201ENST00000637339 95 ntBASIC0.25□□□□□ -2.37
GPC4O75487 RNU6-1313P-201ENST00000362622 102 ntBASIC0.24□□□□□ -2.37
GPC4O75487 Y_RNA.57-201ENST00000362806 113 ntBASIC0.24□□□□□ -2.37
GPC4O75487 SNORD50.2-201ENST00000365465 70 ntBASIC0.24□□□□□ -2.37
GPC4O75487 RNU6-571P-201ENST00000384128 107 ntBASIC0.24□□□□□ -2.37
GPC4O75487 MIR760-201ENST00000390220 80 ntBASIC0.24□□□□□ -2.37
GPC4O75487 MIR548G-201ENST00000408442 89 ntBASIC0.24□□□□□ -2.37
GPC4O75487 AC097635.1-201ENST00000450678 155 ntBASIC0.24□□□□□ -2.37
GPC4O75487 RNU6-1006P-201ENST00000516998 103 ntBASIC0.24□□□□□ -2.37
GPC4O75487 MIR1273G-201ENST00000577677 100 ntBASIC0.24□□□□□ -2.37
GPC4O75487 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
GPC4O75487 MIR499B-201ENST00000636498 73 ntBASIC0.24□□□□□ -2.37
GPC4O75487 Y_RNA.342-201ENST00000365352 113 ntBASIC0.23□□□□□ -2.37
GPC4O75487 AC069113.3-201ENST00000521019 150 ntBASIC0.23□□□□□ -2.37
GPC4O75487 RNU6-90P-201ENST00000606352 106 ntBASIC0.23□□□□□ -2.37
GPC4O75487 RNU1-29P-201ENST00000606574 126 ntBASIC0.23□□□□□ -2.37
GPC4O75487 SNORA70.25-201ENST00000612741 95 ntBASIC0.23□□□□□ -2.37
GPC4O75487 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.23□□□□□ -2.37
GPC4O75487 Y_RNA.35-201ENST00000362601 101 ntBASIC0.22□□□□□ -2.37
GPC4O75487 RNU6-1201P-201ENST00000384227 107 ntBASIC0.22□□□□□ -2.37
GPC4O75487 MIR519A1-201ENST00000385257 85 ntBASIC0.22□□□□□ -2.37
GPC4O75487 MIR643-201ENST00000385267 97 ntBASIC0.22□□□□□ -2.37
GPC4O75487 Y_RNA.712-201ENST00000517011 92 ntBASIC0.22□□□□□ -2.37
GPC4O75487 AL365222.1-201ENST00000614661 98 ntBASIC0.22□□□□□ -2.37
GPC4O75487 Y_RNA.85-201ENST00000363014 111 ntBASIC0.21□□□□□ -2.38
GPC4O75487 SNORD116-14-201ENST00000383894 92 ntBASIC0.21□□□□□ -2.38
GPC4O75487 SNORD116-17-201ENST00000383929 92 ntBASIC0.21□□□□□ -2.38
GPC4O75487 SNORD116-15-201ENST00000384445 92 ntBASIC0.21□□□□□ -2.38
GPC4O75487 SNORD116-19-201ENST00000384729 92 ntBASIC0.21□□□□□ -2.38
GPC4O75487 RNU6-269P-201ENST00000391077 97 ntBASIC0.21□□□□□ -2.38
GPC4O75487 Y_RNA.659-201ENST00000515994 113 ntBASIC0.21□□□□□ -2.38
GPC4O75487 RNU6-1018P-201ENST00000516577 106 ntBASIC0.21□□□□□ -2.38
GPC4O75487 AL442128.1-201ENST00000615151 90 ntBASIC0.21□□□□□ -2.38
GPC4O75487 MIR924-201ENST00000638017 53 ntBASIC0.21□□□□□ -2.38
GPC4O75487 SNORD38.1-201ENST00000363863 68 ntBASIC0.2□□□□□ -2.38
GPC4O75487 Y_RNA.205-201ENST00000364128 113 ntBASIC0.2□□□□□ -2.38
GPC4O75487 MIR577-201ENST00000385196 96 ntBASIC0.2□□□□□ -2.38
GPC4O75487 RPL39P34-201ENST00000477141 156 ntBASIC0.2□□□□□ -2.38
GPC4O75487 RNU7-13P-201ENST00000516413 62 ntBASIC0.2□□□□□ -2.38
GPC4O75487 AC068339.1-201ENST00000526965 141 ntBASIC0.2□□□□□ -2.38
GPC4O75487 MIR6779-201ENST00000617283 64 ntBASIC0.2□□□□□ -2.38
GPC4O75487 RNU6-1260P-201ENST00000362944 107 ntBASIC0.19□□□□□ -2.38
GPC4O75487 RNU6-1099P-201ENST00000363533 107 ntBASIC0.19□□□□□ -2.38
GPC4O75487 Y_RNA.309-201ENST00000365046 111 ntBASIC0.19□□□□□ -2.38
GPC4O75487 RNU6-959P-201ENST00000384671 107 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 198 ms