Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 Y_RNA.5-201ENST00000362334 102 ntBASIC-0.96□□□□□ -2.56
SHOX2O60902 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.96□□□□□ -2.56
SHOX2O60902 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.96□□□□□ -2.56
SHOX2O60902 Y_RNA.152-201ENST00000363578 100 ntBASIC-0.96□□□□□ -2.56
SHOX2O60902 Y_RNA.154-201ENST00000363624 102 ntBASIC-0.96□□□□□ -2.56
SHOX2O60902 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.96□□□□□ -2.56
SHOX2O60902 RNU6-901P-201ENST00000384593 106 ntBASIC-0.96□□□□□ -2.56
SHOX2O60902 SNORD116-4-201ENST00000384733 96 ntBASIC-0.96□□□□□ -2.56
SHOX2O60902 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.96□□□□□ -2.56
SHOX2O60902 AC244090.1-201ENST00000441884 93 ntBASIC-0.96□□□□□ -2.56
SHOX2O60902 MIR1270-201ENST00000459320 83 ntBASIC-0.96□□□□□ -2.56
SHOX2O60902 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.96□□□□□ -2.56
SHOX2O60902 RNU6-277P-201ENST00000516272 106 ntBASIC-0.96□□□□□ -2.56
SHOX2O60902 snoU83B.1-201ENST00000517136 88 ntBASIC-0.96□□□□□ -2.56
SHOX2O60902 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-0.96□□□□□ -2.56
SHOX2O60902 MIR4500-201ENST00000579472 76 ntBASIC-0.96□□□□□ -2.56
SHOX2O60902 MIR548AE2-201ENST00000583456 67 ntBASIC-0.96□□□□□ -2.56
SHOX2O60902 RNU6-211P-201ENST00000384047 107 ntBASIC-0.97□□□□□ -2.56
SHOX2O60902 RNU6-524P-201ENST00000384270 107 ntBASIC-0.97□□□□□ -2.56
SHOX2O60902 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.97□□□□□ -2.56
SHOX2O60902 MIR548I2-201ENST00000408348 149 ntBASIC-0.97□□□□□ -2.56
SHOX2O60902 SNORD63B-201ENST00000411005 70 ntBASIC-0.97□□□□□ -2.56
SHOX2O60902 AC082651.2-201ENST00000496833 166 ntBASIC-0.97□□□□□ -2.56
SHOX2O60902 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.97□□□□□ -2.56
SHOX2O60902 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.97□□□□□ -2.56
SHOX2O60902 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.97□□□□□ -2.56
SHOX2O60902 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-0.97□□□□□ -2.56
SHOX2O60902 MIR6854-201ENST00000614935 69 ntBASIC-0.97□□□□□ -2.56
SHOX2O60902 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.98□□□□□ -2.57
SHOX2O60902 RNY1P6-201ENST00000384193 109 ntBASIC-0.98□□□□□ -2.57
SHOX2O60902 MIR487B-201ENST00000385021 84 ntBASIC-0.98□□□□□ -2.57
SHOX2O60902 AL589823.1-201ENST00000429577 183 ntBASIC-0.98□□□□□ -2.57
SHOX2O60902 AC098614.3-201ENST00000438957 440 ntBASIC-0.98□□□□□ -2.57
SHOX2O60902 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-0.98□□□□□ -2.57
SHOX2O60902 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.98□□□□□ -2.57
SHOX2O60902 RNU6-453P-201ENST00000516819 85 ntBASIC-0.98□□□□□ -2.57
SHOX2O60902 AP000676.1-201ENST00000533307 52 ntBASIC-0.98□□□□□ -2.57
SHOX2O60902 MIR1302-1-201ENST00000637932 143 ntBASIC-0.98□□□□□ -2.57
SHOX2O60902 SNORD115-25-201ENST00000362619 82 ntBASIC-0.99□□□□□ -2.57
SHOX2O60902 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.99□□□□□ -2.57
SHOX2O60902 snoU2_19.4-201ENST00000364329 80 ntBASIC-0.99□□□□□ -2.57
SHOX2O60902 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.99□□□□□ -2.57
SHOX2O60902 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.99□□□□□ -2.57
SHOX2O60902 RNU6-476P-201ENST00000384726 107 ntBASIC-0.99□□□□□ -2.57
SHOX2O60902 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.99□□□□□ -2.57
SHOX2O60902 MIR4460-201ENST00000577862 86 ntBASIC-0.99□□□□□ -2.57
SHOX2O60902 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-0.99□□□□□ -2.57
SHOX2O60902 MIR8068-201ENST00000618032 68 ntBASIC-0.99□□□□□ -2.57
SHOX2O60902 SNORA2.1-201ENST00000363089 137 ntBASIC-1□□□□□ -2.57
SHOX2O60902 RNU6-728P-201ENST00000365375 104 ntBASIC-1□□□□□ -2.57
SHOX2O60902 RNU2-51P-201ENST00000410708 197 ntBASIC-1□□□□□ -2.57
SHOX2O60902 RNU6-592P-201ENST00000411333 103 ntBASIC-1□□□□□ -2.57
SHOX2O60902 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1□□□□□ -2.57
SHOX2O60902 RNU6-561P-201ENST00000516222 102 ntBASIC-1□□□□□ -2.57
SHOX2O60902 AL442663.2-201ENST00000554385 511 ntBASIC-1□□□□□ -2.57
SHOX2O60902 U4.1-201ENST00000620349 87 ntBASIC-1□□□□□ -2.57
SHOX2O60902 MIR6818-201ENST00000621576 65 ntBASIC-1□□□□□ -2.57
SHOX2O60902 Y_RNA.70-201ENST00000362886 110 ntBASIC-1.01□□□□□ -2.57
SHOX2O60902 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.01□□□□□ -2.57
SHOX2O60902 MIR548H1-201ENST00000408610 102 ntBASIC-1.01□□□□□ -2.57
SHOX2O60902 RNU7-48P-201ENST00000458875 63 ntBASIC-1.01□□□□□ -2.57
SHOX2O60902 RNU7-106P-201ENST00000459514 67 ntBASIC-1.01□□□□□ -2.57
SHOX2O60902 MIR3139-201ENST00000579145 76 ntBASIC-1.01□□□□□ -2.57
SHOX2O60902 MIR5704-201ENST00000584029 77 ntBASIC-1.01□□□□□ -2.57
SHOX2O60902 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-1.01□□□□□ -2.57
SHOX2O60902 RNU6-170P-201ENST00000362832 104 ntBASIC-1.02□□□□□ -2.57
SHOX2O60902 SNORD115-23-201ENST00000364461 82 ntBASIC-1.02□□□□□ -2.57
SHOX2O60902 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.02□□□□□ -2.57
SHOX2O60902 MIR527-201ENST00000385244 85 ntBASIC-1.02□□□□□ -2.57
SHOX2O60902 MT-TM-201ENST00000387377 68 ntBASIC-1.02□□□□□ -2.57
SHOX2O60902 RNA5SP86-201ENST00000390869 98 ntBASIC-1.02□□□□□ -2.57
SHOX2O60902 RNU6-466P-201ENST00000391224 103 ntBASIC-1.02□□□□□ -2.57
SHOX2O60902 RNU4-43P-201ENST00000410628 137 ntBASIC-1.02□□□□□ -2.57
SHOX2O60902 SNORD19B-201ENST00000459623 84 ntBASIC-1.02□□□□□ -2.57
SHOX2O60902 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.02□□□□□ -2.57
SHOX2O60902 SNORD116-25-201ENST00000516517 92 ntBASIC-1.02□□□□□ -2.57
SHOX2O60902 AC007012.1-201ENST00000567192 175 ntBASIC-1.02□□□□□ -2.57
SHOX2O60902 YWHAEP3-201ENST00000582767 121 ntBASIC-1.02□□□□□ -2.57
SHOX2O60902 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.03□□□□□ -2.57
SHOX2O60902 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.03□□□□□ -2.57
SHOX2O60902 RNU6-905P-201ENST00000384434 107 ntBASIC-1.03□□□□□ -2.57
SHOX2O60902 Y_RNA.531-201ENST00000384589 121 ntBASIC-1.03□□□□□ -2.57
SHOX2O60902 MIR206-201ENST00000384872 86 ntBASIC-1.03□□□□□ -2.57
SHOX2O60902 MIR624-201ENST00000385217 97 ntBASIC-1.03□□□□□ -2.57
SHOX2O60902 RNU6-1307P-201ENST00000391012 103 ntBASIC-1.03□□□□□ -2.57
SHOX2O60902 MIR2113-201ENST00000459007 91 ntBASIC-1.03□□□□□ -2.57
SHOX2O60902 SNORD2-201ENST00000459163 69 ntBASIC-1.03□□□□□ -2.57
SHOX2O60902 Y_RNA.632-201ENST00000459189 102 ntBASIC-1.03□□□□□ -2.57
SHOX2O60902 MIR335-201ENST00000362173 94 ntBASIC-1.04□□□□□ -2.58
SHOX2O60902 RNU6-978P-201ENST00000364371 103 ntBASIC-1.04□□□□□ -2.58
SHOX2O60902 SNORA51.5-201ENST00000384126 131 ntBASIC-1.04□□□□□ -2.58
SHOX2O60902 Y_RNA.448-201ENST00000384185 108 ntBASIC-1.04□□□□□ -2.58
SHOX2O60902 MIR507-201ENST00000385234 94 ntBASIC-1.04□□□□□ -2.58
SHOX2O60902 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-1.05□□□□□ -2.58
SHOX2O60902 Y_RNA.127-201ENST00000363386 109 ntBASIC-1.05□□□□□ -2.58
SHOX2O60902 RNU6-1289P-201ENST00000384431 106 ntBASIC-1.05□□□□□ -2.58
SHOX2O60902 MIR652-201ENST00000385278 98 ntBASIC-1.05□□□□□ -2.58
SHOX2O60902 RNU6-121P-201ENST00000410525 99 ntBASIC-1.05□□□□□ -2.58
SHOX2O60902 RNU2-35P-201ENST00000516446 142 ntBASIC-1.05□□□□□ -2.58
SHOX2O60902 RNU6-980P-201ENST00000516925 103 ntBASIC-1.05□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 208 ms