Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 RPL39P34-201ENST00000477141 156 ntBASIC0.68□□□□□ -2.3
CTNND1O60716 RNU6-589P-201ENST00000516485 107 ntBASIC0.68□□□□□ -2.3
CTNND1O60716 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.68□□□□□ -2.3
CTNND1O60716 RNU6-1290P-201ENST00000362957 109 ntBASIC0.67□□□□□ -2.3
CTNND1O60716 Y_RNA.85-201ENST00000363014 111 ntBASIC0.67□□□□□ -2.3
CTNND1O60716 SNORD18A-201ENST00000363753 72 ntBASIC0.67□□□□□ -2.3
CTNND1O60716 RNU6-945P-201ENST00000383947 107 ntBASIC0.67□□□□□ -2.3
CTNND1O60716 RNU6-409P-201ENST00000384114 104 ntBASIC0.67□□□□□ -2.3
CTNND1O60716 MIR548A3-201ENST00000385297 97 ntBASIC0.67□□□□□ -2.3
CTNND1O60716 RNU6-1064P-201ENST00000410626 104 ntBASIC0.67□□□□□ -2.3
CTNND1O60716 RNU6-733P-201ENST00000410759 104 ntBASIC0.67□□□□□ -2.3
CTNND1O60716 AC138869.1-201ENST00000568623 124 ntBASIC0.67□□□□□ -2.3
CTNND1O60716 AC092634.7-201ENST00000621022 103 ntBASIC0.67□□□□□ -2.3
CTNND1O60716 AL162726.3-218ENST00000636401 95 ntBASIC0.67□□□□□ -2.3
CTNND1O60716 AL512310.12-203ENST00000640543 90 ntBASIC0.67□□□□□ -2.3
CTNND1O60716 Y_RNA.273-201ENST00000364703 102 ntBASIC0.66□□□□□ -2.3
CTNND1O60716 SNORD38.2-201ENST00000384470 69 ntBASIC0.66□□□□□ -2.3
CTNND1O60716 MIR635-201ENST00000384830 98 ntBASIC0.66□□□□□ -2.3
CTNND1O60716 RN7SKP12-201ENST00000516275 143 ntBASIC0.66□□□□□ -2.3
CTNND1O60716 RNU6-1018P-201ENST00000516577 106 ntBASIC0.66□□□□□ -2.3
CTNND1O60716 MIR6129-201ENST00000616087 109 ntBASIC0.66□□□□□ -2.3
CTNND1O60716 AC243829.3-201ENST00000622177 108 ntBASIC0.66□□□□□ -2.3
CTNND1O60716 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.3
CTNND1O60716 RNU6-1313P-201ENST00000362622 102 ntBASIC0.65□□□□□ -2.31
CTNND1O60716 SNORA63.5-201ENST00000363548 123 ntBASIC0.65□□□□□ -2.31
CTNND1O60716 Y_RNA.155-201ENST00000363632 101 ntBASIC0.65□□□□□ -2.31
CTNND1O60716 Y_RNA.323-201ENST00000365157 109 ntBASIC0.65□□□□□ -2.31
CTNND1O60716 SNORD116-21-201ENST00000384507 92 ntBASIC0.65□□□□□ -2.31
CTNND1O60716 Y_RNA.567-201ENST00000384736 106 ntBASIC0.65□□□□□ -2.31
CTNND1O60716 RNU6-816P-201ENST00000390914 107 ntBASIC0.65□□□□□ -2.31
CTNND1O60716 RNU6-1268P-201ENST00000391214 107 ntBASIC0.65□□□□□ -2.31
CTNND1O60716 RNU6-1239P-201ENST00000391310 107 ntBASIC0.65□□□□□ -2.31
CTNND1O60716 MIR1912-201ENST00000410389 80 ntBASIC0.65□□□□□ -2.31
CTNND1O60716 BX276092.1-201ENST00000427368 251 ntBASIC0.65□□□□□ -2.31
CTNND1O60716 RNU6-1229P-201ENST00000364295 107 ntBASIC0.64□□□□□ -2.31
CTNND1O60716 Y_RNA.247-201ENST00000364500 92 ntBASIC0.64□□□□□ -2.31
CTNND1O60716 RNA5SP517-201ENST00000364724 117 ntBASIC0.64□□□□□ -2.31
CTNND1O60716 U8.6-201ENST00000364939 135 ntBASIC0.64□□□□□ -2.31
CTNND1O60716 RNU6-215P-201ENST00000365169 102 ntBASIC0.64□□□□□ -2.31
CTNND1O60716 RNU6-880P-201ENST00000384526 107 ntBASIC0.64□□□□□ -2.31
CTNND1O60716 RNU6-1081P-201ENST00000384537 107 ntBASIC0.64□□□□□ -2.31
CTNND1O60716 Y_RNA.629-201ENST00000411368 105 ntBASIC0.64□□□□□ -2.31
CTNND1O60716 AC068339.1-201ENST00000526965 141 ntBASIC0.64□□□□□ -2.31
CTNND1O60716 MIR3613-201ENST00000579844 87 ntBASIC0.64□□□□□ -2.31
CTNND1O60716 MIR4639-201ENST00000584938 69 ntBASIC0.64□□□□□ -2.31
CTNND1O60716 SNORD28-201ENST00000384706 75 ntBASIC0.63□□□□□ -2.31
CTNND1O60716 RNY4P18-201ENST00000391107 89 ntBASIC0.63□□□□□ -2.31
CTNND1O60716 AC244505.6-201ENST00000452829 130 ntBASIC0.63□□□□□ -2.31
CTNND1O60716 RNU6-229P-201ENST00000516614 102 ntBASIC0.63□□□□□ -2.31
CTNND1O60716 MIR5009-201ENST00000578736 100 ntBASIC0.63□□□□□ -2.31
CTNND1O60716 Y_RNA.309-201ENST00000365046 111 ntBASIC0.62□□□□□ -2.31
CTNND1O60716 RNU6-1056P-201ENST00000383996 107 ntBASIC0.62□□□□□ -2.31
CTNND1O60716 RNU6-571P-201ENST00000384128 107 ntBASIC0.62□□□□□ -2.31
CTNND1O60716 RNU6-1201P-201ENST00000384227 107 ntBASIC0.62□□□□□ -2.31
CTNND1O60716 MIR577-201ENST00000385196 96 ntBASIC0.62□□□□□ -2.31
CTNND1O60716 MIR92A1-201ENST00000385233 78 ntBASIC0.62□□□□□ -2.31
CTNND1O60716 SNORA40.8-201ENST00000411034 126 ntBASIC0.62□□□□□ -2.31
CTNND1O60716 Y_RNA.709-201ENST00000516952 92 ntBASIC0.62□□□□□ -2.31
CTNND1O60716 RNA5SP47-201ENST00000517230 109 ntBASIC0.62□□□□□ -2.31
CTNND1O60716 RNU6-537P-201ENST00000517277 103 ntBASIC0.62□□□□□ -2.31
CTNND1O60716 SNORA36.1-201ENST00000363424 132 ntBASIC0.61□□□□□ -2.31
CTNND1O60716 Y_RNA.377-201ENST00000365644 108 ntBASIC0.61□□□□□ -2.31
CTNND1O60716 SNORD20-201ENST00000384550 80 ntBASIC0.61□□□□□ -2.31
CTNND1O60716 SNRPGP12-201ENST00000449481 213 ntBASIC0.61□□□□□ -2.31
CTNND1O60716 TRAJ51-201ENST00000504127 63 ntBASIC0.61□□□□□ -2.31
CTNND1O60716 MTND5P40-201ENST00000559945 246 ntBASIC0.61□□□□□ -2.31
CTNND1O60716 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.61□□□□□ -2.31
CTNND1O60716 MIR924-201ENST00000638017 53 ntBASIC0.61□□□□□ -2.31
CTNND1O60716 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
CTNND1O60716 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.6□□□□□ -2.31
CTNND1O60716 RNU6-1099P-201ENST00000363533 107 ntBASIC0.6□□□□□ -2.31
CTNND1O60716 RNU6-1107P-201ENST00000364817 104 ntBASIC0.6□□□□□ -2.31
CTNND1O60716 RNU6-1325P-201ENST00000364905 105 ntBASIC0.6□□□□□ -2.31
CTNND1O60716 RNU6-1014P-201ENST00000383940 103 ntBASIC0.6□□□□□ -2.31
CTNND1O60716 SNORA8.2-201ENST00000384372 139 ntBASIC0.6□□□□□ -2.31
CTNND1O60716 RNU6-106P-201ENST00000384405 107 ntBASIC0.6□□□□□ -2.31
CTNND1O60716 SCARNA16.5-201ENST00000517114 183 ntBASIC0.6□□□□□ -2.31
CTNND1O60716 MIR4694-201ENST00000578534 80 ntBASIC0.6□□□□□ -2.31
CTNND1O60716 AC244669.1-204ENST00000621564 178 ntBASIC0.6□□□□□ -2.31
CTNND1O60716 MIR5087-201ENST00000635826 76 ntBASIC0.6□□□□□ -2.31
CTNND1O60716 Y_RNA.49-201ENST00000362714 112 ntBASIC0.59□□□□□ -2.31
CTNND1O60716 RNA5SP457-201ENST00000363657 124 ntBASIC0.59□□□□□ -2.31
CTNND1O60716 SNORD38.1-201ENST00000363863 68 ntBASIC0.59□□□□□ -2.31
CTNND1O60716 RNU6-755P-201ENST00000364400 103 ntBASIC0.59□□□□□ -2.31
CTNND1O60716 SNORD71-201ENST00000411292 86 ntBASIC0.59□□□□□ -2.31
CTNND1O60716 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.59□□□□□ -2.31
CTNND1O60716 RNA5SP268-201ENST00000516828 124 ntBASIC0.59□□□□□ -2.31
CTNND1O60716 MIR6828-201ENST00000636181 60 ntBASIC0.59□□□□□ -2.31
CTNND1O60716 RNU6-170P-201ENST00000362832 104 ntBASIC0.58□□□□□ -2.32
CTNND1O60716 RNU6-832P-201ENST00000363319 107 ntBASIC0.58□□□□□ -2.32
CTNND1O60716 SNORD115-24-201ENST00000363528 82 ntBASIC0.58□□□□□ -2.32
CTNND1O60716 Y_RNA.173-201ENST00000363776 113 ntBASIC0.58□□□□□ -2.32
CTNND1O60716 MIR518A1-201ENST00000385068 85 ntBASIC0.58□□□□□ -2.32
CTNND1O60716 RNU6-554P-201ENST00000410466 106 ntBASIC0.58□□□□□ -2.32
CTNND1O60716 RNU6-850P-201ENST00000516934 103 ntBASIC0.58□□□□□ -2.32
CTNND1O60716 AL442128.1-201ENST00000615151 90 ntBASIC0.58□□□□□ -2.32
CTNND1O60716 uc_338.17-201ENST00000619633 179 ntBASIC0.58□□□□□ -2.32
CTNND1O60716 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.57□□□□□ -2.32
CTNND1O60716 RNY3P2-201ENST00000362918 102 ntBASIC0.57□□□□□ -2.32
CTNND1O60716 SNORD118-201ENST00000363593 134 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms