Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 Y_RNA.423-201ENST00000384057 113 ntBASIC0.23□□□□□ -2.37
SSX4O60224 RNU6-815P-201ENST00000384080 113 ntBASIC0.23□□□□□ -2.37
SSX4O60224 RNU6-187P-201ENST00000384139 106 ntBASIC0.23□□□□□ -2.37
SSX4O60224 MIR599-201ENST00000385069 95 ntBASIC0.23□□□□□ -2.37
SSX4O60224 MIR548I1-201ENST00000408810 149 ntBASIC0.23□□□□□ -2.37
SSX4O60224 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
SSX4O60224 AC023932.2-201ENST00000603176 175 ntBASIC0.23□□□□□ -2.37
SSX4O60224 Y_RNA.221-201ENST00000364248 96 ntBASIC0.22□□□□□ -2.37
SSX4O60224 RNU4-67P-201ENST00000364569 141 ntBASIC0.22□□□□□ -2.37
SSX4O60224 MIR548L-201ENST00000408303 86 ntBASIC0.22□□□□□ -2.37
SSX4O60224 SNORA7.5-201ENST00000410672 110 ntBASIC0.22□□□□□ -2.37
SSX4O60224 AC097635.1-201ENST00000450678 155 ntBASIC0.22□□□□□ -2.37
SSX4O60224 RNU7-104P-201ENST00000459398 79 ntBASIC0.22□□□□□ -2.37
SSX4O60224 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.22□□□□□ -2.37
SSX4O60224 MIR2909-201ENST00000617113 69 ntBASIC0.22□□□□□ -2.37
SSX4O60224 MTND5P18-201ENST00000445624 1801 ntBASIC0.22□□□□□ -2.37
SSX4O60224 RNU6-170P-201ENST00000362832 104 ntBASIC0.21□□□□□ -2.38
SSX4O60224 RNA5SP403-201ENST00000363598 108 ntBASIC0.21□□□□□ -2.38
SSX4O60224 RNU6-571P-201ENST00000384128 107 ntBASIC0.21□□□□□ -2.38
SSX4O60224 RNA5SP63-201ENST00000391225 112 ntBASIC0.21□□□□□ -2.38
SSX4O60224 SNORD63B-201ENST00000411005 70 ntBASIC0.21□□□□□ -2.38
SSX4O60224 RNU6-1211P-201ENST00000459179 105 ntBASIC0.21□□□□□ -2.38
SSX4O60224 AC069113.3-201ENST00000521019 150 ntBASIC0.21□□□□□ -2.38
SSX4O60224 RNY4P6-201ENST00000363667 96 ntBASIC0.2□□□□□ -2.38
SSX4O60224 Y_RNA.344-201ENST00000365381 112 ntBASIC0.2□□□□□ -2.38
SSX4O60224 SNORD38.2-201ENST00000384470 69 ntBASIC0.2□□□□□ -2.38
SSX4O60224 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.2□□□□□ -2.38
SSX4O60224 RNU7-195P-201ENST00000458793 62 ntBASIC0.2□□□□□ -2.38
SSX4O60224 RNU6-772P-201ENST00000516042 105 ntBASIC0.2□□□□□ -2.38
SSX4O60224 RNU6-850P-201ENST00000516934 103 ntBASIC0.2□□□□□ -2.38
SSX4O60224 MIR4752-201ENST00000579672 72 ntBASIC0.2□□□□□ -2.38
SSX4O60224 AC067863.3-201ENST00000624172 122 ntBASIC0.2□□□□□ -2.38
SSX4O60224 RNU6-363P-201ENST00000362895 105 ntBASIC0.19□□□□□ -2.38
SSX4O60224 MIR539-201ENST00000365690 78 ntBASIC0.19□□□□□ -2.38
SSX4O60224 MIR519A1-201ENST00000385257 85 ntBASIC0.19□□□□□ -2.38
SSX4O60224 Y_RNA.630-201ENST00000411370 108 ntBASIC0.19□□□□□ -2.38
SSX4O60224 Y_RNA.586-201ENST00000391146 98 ntBASIC0.18□□□□□ -2.38
SSX4O60224 Y_RNA.809-201ENST00000516058 95 ntBASIC0.18□□□□□ -2.38
SSX4O60224 RNU6-971P-201ENST00000516920 106 ntBASIC0.18□□□□□ -2.38
SSX4O60224 MTND5P40-201ENST00000559945 246 ntBASIC0.18□□□□□ -2.38
SSX4O60224 MIR4315-1-201ENST00000636800 73 ntBASIC0.18□□□□□ -2.38
SSX4O60224 AL512310.12-203ENST00000640543 90 ntBASIC0.18□□□□□ -2.38
SSX4O60224 MIR4315-2-201ENST00000640925 73 ntBASIC0.18□□□□□ -2.38
SSX4O60224 SNORA9.1-201ENST00000362412 131 ntBASIC0.17□□□□□ -2.38
SSX4O60224 Y_RNA.346-201ENST00000365385 112 ntBASIC0.17□□□□□ -2.38
SSX4O60224 RNU7-106P-201ENST00000459514 67 ntBASIC0.17□□□□□ -2.38
SSX4O60224 RNU6-848P-201ENST00000515948 107 ntBASIC0.17□□□□□ -2.38
SSX4O60224 RNU6-617P-201ENST00000516147 107 ntBASIC0.17□□□□□ -2.38
SSX4O60224 RNU6-473P-201ENST00000516164 107 ntBASIC0.17□□□□□ -2.38
SSX4O60224 RNU6-1049P-201ENST00000516414 107 ntBASIC0.17□□□□□ -2.38
SSX4O60224 Y_RNA.681-201ENST00000516445 113 ntBASIC0.17□□□□□ -2.38
SSX4O60224 AL162376.1-201ENST00000624117 175 ntBASIC0.17□□□□□ -2.38
SSX4O60224 AL157777.2-201ENST00000258070 137 ntBASIC0.16□□□□□ -2.38
SSX4O60224 RNU6-1313P-201ENST00000362622 102 ntBASIC0.16□□□□□ -2.38
SSX4O60224 Y_RNA.68-201ENST00000362881 102 ntBASIC0.16□□□□□ -2.38
SSX4O60224 Y_RNA.155-201ENST00000363632 101 ntBASIC0.16□□□□□ -2.38
SSX4O60224 Y_RNA.342-201ENST00000365352 113 ntBASIC0.16□□□□□ -2.38
SSX4O60224 RNU6-409P-201ENST00000384114 104 ntBASIC0.16□□□□□ -2.38
SSX4O60224 Y_RNA.507-201ENST00000384500 99 ntBASIC0.16□□□□□ -2.38
SSX4O60224 MIR760-201ENST00000390220 80 ntBASIC0.16□□□□□ -2.38
SSX4O60224 SNORD41.1-201ENST00000391000 69 ntBASIC0.16□□□□□ -2.38
SSX4O60224 RNA5SP299-201ENST00000391203 116 ntBASIC0.16□□□□□ -2.38
SSX4O60224 RNU7-107P-201ENST00000459121 61 ntBASIC0.16□□□□□ -2.38
SSX4O60224 RNU6-1006P-201ENST00000516998 103 ntBASIC0.16□□□□□ -2.38
SSX4O60224 Y_RNA.35-201ENST00000362601 101 ntBASIC0.15□□□□□ -2.39
SSX4O60224 RNU6-1260P-201ENST00000362944 107 ntBASIC0.15□□□□□ -2.39
SSX4O60224 SNORA2A-201ENST00000383885 135 ntBASIC0.15□□□□□ -2.39
SSX4O60224 MIR516A2-201ENST00000384888 90 ntBASIC0.15□□□□□ -2.39
SSX4O60224 MIR516A1-201ENST00000385033 90 ntBASIC0.15□□□□□ -2.39
SSX4O60224 MT-TR-201ENST00000387439 65 ntBASIC0.15□□□□□ -2.39
SSX4O60224 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
SSX4O60224 AL353813.1-201ENST00000440700 253 ntBASIC0.15□□□□□ -2.39
SSX4O60224 RNU7-129P-201ENST00000516128 62 ntBASIC0.15□□□□□ -2.39
SSX4O60224 RNU1-29P-201ENST00000606574 126 ntBASIC0.15□□□□□ -2.39
SSX4O60224 MIR6718-201ENST00000616153 80 ntBASIC0.15□□□□□ -2.39
SSX4O60224 Y_RNA.362-201ENST00000365518 110 ntBASIC0.14□□□□□ -2.39
SSX4O60224 RNU6-524P-201ENST00000384270 107 ntBASIC0.14□□□□□ -2.39
SSX4O60224 Y_RNA.525-201ENST00000384570 113 ntBASIC0.14□□□□□ -2.39
SSX4O60224 RNU6-816P-201ENST00000390914 107 ntBASIC0.14□□□□□ -2.39
SSX4O60224 RNU6-1268P-201ENST00000391214 107 ntBASIC0.14□□□□□ -2.39
SSX4O60224 RNU6-1239P-201ENST00000391310 107 ntBASIC0.14□□□□□ -2.39
SSX4O60224 RNU6-1018P-201ENST00000516577 106 ntBASIC0.14□□□□□ -2.39
SSX4O60224 MIR3133-201ENST00000583157 78 ntBASIC0.14□□□□□ -2.39
SSX4O60224 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.14□□□□□ -2.39
SSX4O60224 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.14□□□□□ -2.39
SSX4O60224 Y_RNA.247-201ENST00000364500 92 ntBASIC0.13□□□□□ -2.39
SSX4O60224 RNU6-269P-201ENST00000391077 97 ntBASIC0.13□□□□□ -2.39
SSX4O60224 SPINT5P-201ENST00000448174 155 ntBASIC0.13□□□□□ -2.39
SSX4O60224 RNU6-1232P-201ENST00000516299 86 ntBASIC0.13□□□□□ -2.39
SSX4O60224 Y_RNA.703-201ENST00000516846 111 ntBASIC0.13□□□□□ -2.39
SSX4O60224 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.13□□□□□ -2.39
SSX4O60224 AL162726.3-218ENST00000636401 95 ntBASIC0.13□□□□□ -2.39
SSX4O60224 RNU6-774P-201ENST00000363238 107 ntBASIC0.12□□□□□ -2.39
SSX4O60224 SNORD38.1-201ENST00000363863 68 ntBASIC0.12□□□□□ -2.39
SSX4O60224 Y_RNA.323-201ENST00000365157 109 ntBASIC0.12□□□□□ -2.39
SSX4O60224 RNA5SP128-201ENST00000365305 116 ntBASIC0.12□□□□□ -2.39
SSX4O60224 RNU6-80P-201ENST00000384195 107 ntBASIC0.12□□□□□ -2.39
SSX4O60224 RPL39P34-201ENST00000477141 156 ntBASIC0.12□□□□□ -2.39
SSX4O60224 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.11□□□□□ -2.39
SSX4O60224 MIR548G-201ENST00000408442 89 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 7.6 ms