Protein–RNA interactions for Protein: O43639

NCK2, Cytoplasmic protein NCK2, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK2O43639 SNORD118-201ENST00000363593 134 ntBASIC0.52□□□□□ -2.33
NCK2O43639 MIR519A1-201ENST00000385257 85 ntBASIC0.52□□□□□ -2.33
NCK2O43639 MIR1912-201ENST00000410389 80 ntBASIC0.52□□□□□ -2.33
NCK2O43639 RNU6-735P-201ENST00000410612 107 ntBASIC0.52□□□□□ -2.33
NCK2O43639 RPL39P34-201ENST00000477141 156 ntBASIC0.52□□□□□ -2.33
NCK2O43639 AC090625.1-201ENST00000357130 210 ntBASIC0.51□□□□□ -2.33
NCK2O43639 RNU6-774P-201ENST00000363238 107 ntBASIC0.51□□□□□ -2.33
NCK2O43639 RNA5SP268-201ENST00000516828 124 ntBASIC0.51□□□□□ -2.33
NCK2O43639 MIR1255B1-201ENST00000636325 63 ntBASIC0.51□□□□□ -2.33
NCK2O43639 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
NCK2O43639 RNU6-1313P-201ENST00000362622 102 ntBASIC0.5□□□□□ -2.33
NCK2O43639 SNORA36.1-201ENST00000363424 132 ntBASIC0.5□□□□□ -2.33
NCK2O43639 MIR34C-201ENST00000384831 77 ntBASIC0.5□□□□□ -2.33
NCK2O43639 AC097635.1-201ENST00000450678 155 ntBASIC0.5□□□□□ -2.33
NCK2O43639 RNU6-659P-201ENST00000516454 104 ntBASIC0.5□□□□□ -2.33
NCK2O43639 RNU6-170P-201ENST00000362832 104 ntBASIC0.49□□□□□ -2.33
NCK2O43639 RNA5SP245-201ENST00000364239 121 ntBASIC0.49□□□□□ -2.33
NCK2O43639 SNORD116-14-201ENST00000383894 92 ntBASIC0.49□□□□□ -2.33
NCK2O43639 SNORD116-17-201ENST00000383929 92 ntBASIC0.49□□□□□ -2.33
NCK2O43639 RNU6-409P-201ENST00000384114 104 ntBASIC0.49□□□□□ -2.33
NCK2O43639 SNORD116-15-201ENST00000384445 92 ntBASIC0.49□□□□□ -2.33
NCK2O43639 SNORD116-19-201ENST00000384729 92 ntBASIC0.49□□□□□ -2.33
NCK2O43639 RNA5SP63-201ENST00000391225 112 ntBASIC0.49□□□□□ -2.33
NCK2O43639 TMSB4XP3-201ENST00000445144 114 ntBASIC0.49□□□□□ -2.33
NCK2O43639 SNRPGP12-201ENST00000449481 213 ntBASIC0.49□□□□□ -2.33
NCK2O43639 AC023932.2-201ENST00000603176 175 ntBASIC0.49□□□□□ -2.33
NCK2O43639 AC244669.1-204ENST00000621564 178 ntBASIC0.49□□□□□ -2.33
NCK2O43639 Y_RNA.71-201ENST00000362892 104 ntBASIC0.48□□□□□ -2.33
NCK2O43639 SNORA63.5-201ENST00000363548 123 ntBASIC0.48□□□□□ -2.33
NCK2O43639 Y_RNA.218-201ENST00000364218 104 ntBASIC0.48□□□□□ -2.33
NCK2O43639 Y_RNA.344-201ENST00000365381 112 ntBASIC0.48□□□□□ -2.33
NCK2O43639 Y_RNA.630-201ENST00000411370 108 ntBASIC0.48□□□□□ -2.33
NCK2O43639 RNU7-107P-201ENST00000459121 61 ntBASIC0.48□□□□□ -2.33
NCK2O43639 RNA5SP227-201ENST00000516184 113 ntBASIC0.48□□□□□ -2.33
NCK2O43639 AL162726.3-218ENST00000636401 95 ntBASIC0.48□□□□□ -2.33
NCK2O43639 AL512310.12-203ENST00000640543 90 ntBASIC0.48□□□□□ -2.33
NCK2O43639 MIRLET7D-201ENST00000362263 87 ntBASIC0.47□□□□□ -2.33
NCK2O43639 Y_RNA.309-201ENST00000365046 111 ntBASIC0.47□□□□□ -2.33
NCK2O43639 Y_RNA.362-201ENST00000365518 110 ntBASIC0.47□□□□□ -2.33
NCK2O43639 RNU6-187P-201ENST00000384139 106 ntBASIC0.47□□□□□ -2.33
NCK2O43639 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.47□□□□□ -2.33
NCK2O43639 MIR2909-201ENST00000617113 69 ntBASIC0.47□□□□□ -2.33
NCK2O43639 SNORD115-24-201ENST00000363528 82 ntBASIC0.46□□□□□ -2.34
NCK2O43639 Y_RNA.155-201ENST00000363632 101 ntBASIC0.46□□□□□ -2.34
NCK2O43639 SNORD38.1-201ENST00000363863 68 ntBASIC0.46□□□□□ -2.34
NCK2O43639 RNU6-81P-201ENST00000365608 104 ntBASIC0.46□□□□□ -2.34
NCK2O43639 SNORA7.5-201ENST00000410672 110 ntBASIC0.46□□□□□ -2.34
NCK2O43639 Y_RNA.649-201ENST00000459077 103 ntBASIC0.46□□□□□ -2.34
NCK2O43639 SNORA68.3-201ENST00000515906 83 ntBASIC0.46□□□□□ -2.34
NCK2O43639 RNU6-959P-201ENST00000384671 107 ntBASIC0.45□□□□□ -2.34
NCK2O43639 RNU6-816P-201ENST00000390914 107 ntBASIC0.45□□□□□ -2.34
NCK2O43639 RNU6-1268P-201ENST00000391214 107 ntBASIC0.45□□□□□ -2.34
NCK2O43639 RNU6-1239P-201ENST00000391310 107 ntBASIC0.45□□□□□ -2.34
NCK2O43639 RNU2-59P-201ENST00000410482 191 ntBASIC0.45□□□□□ -2.34
NCK2O43639 BX276092.1-201ENST00000427368 251 ntBASIC0.45□□□□□ -2.34
NCK2O43639 SUMO1P3-201ENST00000439961 304 ntBASIC0.45□□□□□ -2.34
NCK2O43639 TRAJ51-201ENST00000504127 63 ntBASIC0.45□□□□□ -2.34
NCK2O43639 RNU6-848P-201ENST00000515948 107 ntBASIC0.45□□□□□ -2.34
NCK2O43639 RNU6-617P-201ENST00000516147 107 ntBASIC0.45□□□□□ -2.34
NCK2O43639 RNU6-473P-201ENST00000516164 107 ntBASIC0.45□□□□□ -2.34
NCK2O43639 RNU6-1049P-201ENST00000516414 107 ntBASIC0.45□□□□□ -2.34
NCK2O43639 SNORA25.18-201ENST00000607153 114 ntBASIC0.45□□□□□ -2.34
NCK2O43639 Y_RNA.342-201ENST00000365352 113 ntBASIC0.44□□□□□ -2.34
NCK2O43639 Y_RNA.563-201ENST00000384707 108 ntBASIC0.44□□□□□ -2.34
NCK2O43639 MTND5P40-201ENST00000559945 246 ntBASIC0.44□□□□□ -2.34
NCK2O43639 AC007012.1-201ENST00000567192 175 ntBASIC0.44□□□□□ -2.34
NCK2O43639 MIR4514-201ENST00000581410 57 ntBASIC0.44□□□□□ -2.34
NCK2O43639 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.44□□□□□ -2.34
NCK2O43639 Y_RNA.49-201ENST00000362714 112 ntBASIC0.43□□□□□ -2.34
NCK2O43639 SNORD44.1-201ENST00000363202 61 ntBASIC0.43□□□□□ -2.34
NCK2O43639 RNU6-1327P-201ENST00000365302 105 ntBASIC0.43□□□□□ -2.34
NCK2O43639 RNU6-35P-201ENST00000384530 107 ntBASIC0.43□□□□□ -2.34
NCK2O43639 MIR599-201ENST00000385069 95 ntBASIC0.43□□□□□ -2.34
NCK2O43639 SNORD63B-201ENST00000411005 70 ntBASIC0.43□□□□□ -2.34
NCK2O43639 AC008267.6-201ENST00000441664 139 ntBASIC0.43□□□□□ -2.34
NCK2O43639 RNA5SP285-201ENST00000516619 119 ntBASIC0.43□□□□□ -2.34
NCK2O43639 MIR7107-201ENST00000611489 80 ntBASIC0.43□□□□□ -2.34
NCK2O43639 RNA5SP403-201ENST00000363598 108 ntBASIC0.42□□□□□ -2.34
NCK2O43639 Y_RNA.377-201ENST00000365644 108 ntBASIC0.42□□□□□ -2.34
NCK2O43639 RNU6-1126P-201ENST00000384002 107 ntBASIC0.42□□□□□ -2.34
NCK2O43639 MIR548A3-201ENST00000385297 97 ntBASIC0.42□□□□□ -2.34
NCK2O43639 RNA5SP476-201ENST00000516613 103 ntBASIC0.42□□□□□ -2.34
NCK2O43639 RNU6-850P-201ENST00000516934 103 ntBASIC0.42□□□□□ -2.34
NCK2O43639 RNU6-1006P-201ENST00000516998 103 ntBASIC0.42□□□□□ -2.34
NCK2O43639 AL670379.3-201ENST00000605040 251 ntBASIC0.42□□□□□ -2.34
NCK2O43639 RNU6-90P-201ENST00000606352 106 ntBASIC0.42□□□□□ -2.34
NCK2O43639 RNU6-1260P-201ENST00000362944 107 ntBASIC0.41□□□□□ -2.34
NCK2O43639 Y_RNA.809-201ENST00000516058 95 ntBASIC0.41□□□□□ -2.34
NCK2O43639 AC096720.1-201ENST00000604441 183 ntBASIC0.41□□□□□ -2.34
NCK2O43639 Y_RNA.35-201ENST00000362601 101 ntBASIC0.4□□□□□ -2.35
NCK2O43639 RNU6-1201P-201ENST00000384227 107 ntBASIC0.4□□□□□ -2.35
NCK2O43639 MIR548G-201ENST00000408442 89 ntBASIC0.4□□□□□ -2.35
NCK2O43639 AL442128.1-201ENST00000615151 90 ntBASIC0.4□□□□□ -2.35
NCK2O43639 AC067863.3-201ENST00000624172 122 ntBASIC0.4□□□□□ -2.35
NCK2O43639 AL353813.1-201ENST00000440700 253 ntBASIC0.39□□□□□ -2.35
NCK2O43639 RNU6-1333P-201ENST00000516162 93 ntBASIC0.39□□□□□ -2.35
NCK2O43639 SNORD33.1-201ENST00000516213 88 ntBASIC0.39□□□□□ -2.35
NCK2O43639 RNU7-161P-201ENST00000517289 62 ntBASIC0.39□□□□□ -2.35
NCK2O43639 MIR4694-201ENST00000578534 80 ntBASIC0.39□□□□□ -2.35
NCK2O43639 AL603908.1-201ENST00000406098 201 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 174.4 ms