Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.27□□□□□ -2.37
TNFSF11O14788 Y_RNA.35-201ENST00000362601 101 ntBASIC0.26□□□□□ -2.37
TNFSF11O14788 RNU6-726P-201ENST00000364680 107 ntBASIC0.26□□□□□ -2.37
TNFSF11O14788 Y_RNA.353-201ENST00000365440 108 ntBASIC0.26□□□□□ -2.37
TNFSF11O14788 SNORD116-14-201ENST00000383894 92 ntBASIC0.26□□□□□ -2.37
TNFSF11O14788 SNORD116-17-201ENST00000383929 92 ntBASIC0.26□□□□□ -2.37
TNFSF11O14788 SNORD116-15-201ENST00000384445 92 ntBASIC0.26□□□□□ -2.37
TNFSF11O14788 RNY1P4-201ENST00000384595 115 ntBASIC0.26□□□□□ -2.37
TNFSF11O14788 SNORD116-19-201ENST00000384729 92 ntBASIC0.26□□□□□ -2.37
TNFSF11O14788 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.26□□□□□ -2.37
TNFSF11O14788 RNU7-104P-201ENST00000459398 79 ntBASIC0.26□□□□□ -2.37
TNFSF11O14788 AC108740.1-201ENST00000498629 225 ntBASIC0.26□□□□□ -2.37
TNFSF11O14788 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.26□□□□□ -2.37
TNFSF11O14788 MIR3613-201ENST00000579844 87 ntBASIC0.26□□□□□ -2.37
TNFSF11O14788 MIR548H5-201ENST00000580314 60 ntBASIC0.26□□□□□ -2.37
TNFSF11O14788 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.26□□□□□ -2.37
TNFSF11O14788 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.26□□□□□ -2.37
TNFSF11O14788 RNY4P6-201ENST00000363667 96 ntBASIC0.25□□□□□ -2.37
TNFSF11O14788 RNU6-1229P-201ENST00000364295 107 ntBASIC0.25□□□□□ -2.37
TNFSF11O14788 Y_RNA.346-201ENST00000365385 112 ntBASIC0.25□□□□□ -2.37
TNFSF11O14788 RNU6-815P-201ENST00000384080 113 ntBASIC0.25□□□□□ -2.37
TNFSF11O14788 RNU6-571P-201ENST00000384128 107 ntBASIC0.25□□□□□ -2.37
TNFSF11O14788 RNU6-1201P-201ENST00000384227 107 ntBASIC0.25□□□□□ -2.37
TNFSF11O14788 MIR635-201ENST00000384830 98 ntBASIC0.25□□□□□ -2.37
TNFSF11O14788 MIR516A2-201ENST00000384888 90 ntBASIC0.25□□□□□ -2.37
TNFSF11O14788 MIR516A1-201ENST00000385033 90 ntBASIC0.25□□□□□ -2.37
TNFSF11O14788 MIR548A1-201ENST00000385041 97 ntBASIC0.25□□□□□ -2.37
TNFSF11O14788 RNU6-816P-201ENST00000390914 107 ntBASIC0.25□□□□□ -2.37
TNFSF11O14788 RNU6-1268P-201ENST00000391214 107 ntBASIC0.25□□□□□ -2.37
TNFSF11O14788 RNU6-1239P-201ENST00000391310 107 ntBASIC0.25□□□□□ -2.37
TNFSF11O14788 SNORD71-201ENST00000411292 86 ntBASIC0.25□□□□□ -2.37
TNFSF11O14788 Y_RNA.649-201ENST00000459077 103 ntBASIC0.25□□□□□ -2.37
TNFSF11O14788 RNU6-1232P-201ENST00000516299 86 ntBASIC0.25□□□□□ -2.37
TNFSF11O14788 RNU6-135P-201ENST00000516769 101 ntBASIC0.25□□□□□ -2.37
TNFSF11O14788 AL162726.3-218ENST00000636401 95 ntBASIC0.25□□□□□ -2.37
TNFSF11O14788 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.25□□□□□ -2.37
TNFSF11O14788 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
TNFSF11O14788 RNU6-170P-201ENST00000362832 104 ntBASIC0.24□□□□□ -2.37
TNFSF11O14788 Y_RNA.155-201ENST00000363632 101 ntBASIC0.24□□□□□ -2.37
TNFSF11O14788 RNU6-1126P-201ENST00000384002 107 ntBASIC0.24□□□□□ -2.37
TNFSF11O14788 MIR577-201ENST00000385196 96 ntBASIC0.24□□□□□ -2.37
TNFSF11O14788 MIR519A1-201ENST00000385257 85 ntBASIC0.24□□□□□ -2.37
TNFSF11O14788 MIR548I2-201ENST00000408348 149 ntBASIC0.24□□□□□ -2.37
TNFSF11O14788 AC097635.1-201ENST00000450678 155 ntBASIC0.24□□□□□ -2.37
TNFSF11O14788 RNU6-1333P-201ENST00000516162 93 ntBASIC0.24□□□□□ -2.37
TNFSF11O14788 AC007012.1-201ENST00000567192 175 ntBASIC0.24□□□□□ -2.37
TNFSF11O14788 AL365222.1-201ENST00000614661 98 ntBASIC0.24□□□□□ -2.37
TNFSF11O14788 AC091304.10-201ENST00000641554 121 ntBASIC0.24□□□□□ -2.37
TNFSF11O14788 Y_RNA.85-201ENST00000363014 111 ntBASIC0.23□□□□□ -2.37
TNFSF11O14788 RNU6-81P-201ENST00000365608 104 ntBASIC0.23□□□□□ -2.37
TNFSF11O14788 RNU6-409P-201ENST00000384114 104 ntBASIC0.23□□□□□ -2.37
TNFSF11O14788 RNU6-959P-201ENST00000384671 107 ntBASIC0.23□□□□□ -2.37
TNFSF11O14788 MIR548M-201ENST00000408260 86 ntBASIC0.23□□□□□ -2.37
TNFSF11O14788 RNU6-1265P-201ENST00000516342 103 ntBASIC0.23□□□□□ -2.37
TNFSF11O14788 AC010487.4-201ENST00000637027 61 ntBASIC0.23□□□□□ -2.37
TNFSF11O14788 AL512310.12-203ENST00000640543 90 ntBASIC0.23□□□□□ -2.37
TNFSF11O14788 Y_RNA.173-201ENST00000363776 113 ntBASIC0.22□□□□□ -2.37
TNFSF11O14788 Y_RNA.342-201ENST00000365352 113 ntBASIC0.22□□□□□ -2.37
TNFSF11O14788 Y_RNA.423-201ENST00000384057 113 ntBASIC0.22□□□□□ -2.37
TNFSF11O14788 RNU2-59P-201ENST00000410482 191 ntBASIC0.22□□□□□ -2.37
TNFSF11O14788 Y_RNA.809-201ENST00000516058 95 ntBASIC0.22□□□□□ -2.37
TNFSF11O14788 RNU6-1018P-201ENST00000516577 106 ntBASIC0.22□□□□□ -2.37
TNFSF11O14788 MIR4679-2-201ENST00000578358 77 ntBASIC0.22□□□□□ -2.37
TNFSF11O14788 SNORA70.25-201ENST00000612741 95 ntBASIC0.22□□□□□ -2.37
TNFSF11O14788 AL162376.1-201ENST00000624117 175 ntBASIC0.22□□□□□ -2.37
TNFSF11O14788 RNA5SP62-201ENST00000363457 110 ntBASIC0.21□□□□□ -2.38
TNFSF11O14788 U8.6-201ENST00000364939 135 ntBASIC0.21□□□□□ -2.38
TNFSF11O14788 RNU6-1327P-201ENST00000365302 105 ntBASIC0.21□□□□□ -2.38
TNFSF11O14788 RNU6-524P-201ENST00000384270 107 ntBASIC0.21□□□□□ -2.38
TNFSF11O14788 SNORD41.1-201ENST00000391000 69 ntBASIC0.21□□□□□ -2.38
TNFSF11O14788 MIR548G-201ENST00000408442 89 ntBASIC0.21□□□□□ -2.38
TNFSF11O14788 AL161932.1-201ENST00000437408 146 ntBASIC0.21□□□□□ -2.38
TNFSF11O14788 RPL39P34-201ENST00000477141 156 ntBASIC0.21□□□□□ -2.38
TNFSF11O14788 MIR548AG2-201ENST00000581228 64 ntBASIC0.21□□□□□ -2.38
TNFSF11O14788 AL442128.1-201ENST00000615151 90 ntBASIC0.21□□□□□ -2.38
TNFSF11O14788 SNORD36A-201ENST00000362874 73 ntBASIC0.2□□□□□ -2.38
TNFSF11O14788 RNU6-1260P-201ENST00000362944 107 ntBASIC0.2□□□□□ -2.38
TNFSF11O14788 RNU6-1163P-201ENST00000364516 107 ntBASIC0.2□□□□□ -2.38
TNFSF11O14788 Y_RNA.507-201ENST00000384500 99 ntBASIC0.2□□□□□ -2.38
TNFSF11O14788 Y_RNA.563-201ENST00000384707 108 ntBASIC0.2□□□□□ -2.38
TNFSF11O14788 RNU6-269P-201ENST00000391077 97 ntBASIC0.2□□□□□ -2.38
TNFSF11O14788 SPINT5P-201ENST00000448174 155 ntBASIC0.2□□□□□ -2.38
TNFSF11O14788 MTND5P40-201ENST00000559945 246 ntBASIC0.2□□□□□ -2.38
TNFSF11O14788 MIR3920-201ENST00000581751 86 ntBASIC0.2□□□□□ -2.38
TNFSF11O14788 RNU7-10P-201ENST00000607194 63 ntBASIC0.2□□□□□ -2.38
TNFSF11O14788 SNORD38.1-201ENST00000363863 68 ntBASIC0.19□□□□□ -2.38
TNFSF11O14788 Y_RNA.323-201ENST00000365157 109 ntBASIC0.19□□□□□ -2.38
TNFSF11O14788 SNORA2A-201ENST00000383885 135 ntBASIC0.19□□□□□ -2.38
TNFSF11O14788 AC073261.1-201ENST00000429409 121 ntBASIC0.19□□□□□ -2.38
TNFSF11O14788 AC069113.3-201ENST00000521019 150 ntBASIC0.19□□□□□ -2.38
TNFSF11O14788 AC068339.1-201ENST00000526965 141 ntBASIC0.19□□□□□ -2.38
TNFSF11O14788 MIR3910-1-201ENST00000580936 111 ntBASIC0.19□□□□□ -2.38
TNFSF11O14788 U6.95-201ENST00000636931 70 ntBASIC0.19□□□□□ -2.38
TNFSF11O14788 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.19□□□□□ -2.38
TNFSF11O14788 Y_RNA.36-201ENST00000362602 112 ntBASIC0.18□□□□□ -2.38
TNFSF11O14788 Y_RNA.57-201ENST00000362806 113 ntBASIC0.18□□□□□ -2.38
TNFSF11O14788 Y_RNA.377-201ENST00000365644 108 ntBASIC0.18□□□□□ -2.38
TNFSF11O14788 MIR548A3-201ENST00000385297 97 ntBASIC0.18□□□□□ -2.38
TNFSF11O14788 MIR1912-201ENST00000410389 80 ntBASIC0.18□□□□□ -2.38
TNFSF11O14788 SNORA19.1-201ENST00000410656 129 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 200 ms