Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 Y_RNA.390-201ENST00000383932 102 ntBASIC-1.15□□□□□ -2.59
SDCBPO00560 RNU6-905P-201ENST00000384434 107 ntBASIC-1.15□□□□□ -2.59
SDCBPO00560 Y_RNA.529-201ENST00000384586 119 ntBASIC-1.15□□□□□ -2.59
SDCBPO00560 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.15□□□□□ -2.59
SDCBPO00560 RNU6-762P-201ENST00000517107 102 ntBASIC-1.15□□□□□ -2.59
SDCBPO00560 U2.14-201ENST00000615943 113 ntBASIC-1.15□□□□□ -2.59
SDCBPO00560 RNU6-508P-201ENST00000363231 103 ntBASIC-1.16□□□□□ -2.6
SDCBPO00560 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.16□□□□□ -2.6
SDCBPO00560 RNU6-1082P-201ENST00000364574 107 ntBASIC-1.16□□□□□ -2.6
SDCBPO00560 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.16□□□□□ -2.6
SDCBPO00560 Y_RNA.793-201ENST00000411222 111 ntBASIC-1.16□□□□□ -2.6
SDCBPO00560 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-1.16□□□□□ -2.6
SDCBPO00560 MIR369-201ENST00000362155 70 ntBASIC-1.17□□□□□ -2.6
SDCBPO00560 Y_RNA.237-201ENST00000364439 102 ntBASIC-1.17□□□□□ -2.6
SDCBPO00560 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.17□□□□□ -2.6
SDCBPO00560 Y_RNA.294-201ENST00000364916 102 ntBASIC-1.17□□□□□ -2.6
SDCBPO00560 RNU6-54P-201ENST00000365563 107 ntBASIC-1.17□□□□□ -2.6
SDCBPO00560 RNU6-431P-201ENST00000383874 107 ntBASIC-1.17□□□□□ -2.6
SDCBPO00560 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.17□□□□□ -2.6
SDCBPO00560 RNU6-243P-201ENST00000391140 107 ntBASIC-1.17□□□□□ -2.6
SDCBPO00560 RNY3P16-201ENST00000516338 101 ntBASIC-1.17□□□□□ -2.6
SDCBPO00560 Y_RNA.679-201ENST00000516416 91 ntBASIC-1.17□□□□□ -2.6
SDCBPO00560 Y_RNA.721-201ENST00000517207 102 ntBASIC-1.17□□□□□ -2.6
SDCBPO00560 Y_RNA.262-201ENST00000364641 102 ntBASIC-1.18□□□□□ -2.6
SDCBPO00560 Y_RNA.711-201ENST00000516993 102 ntBASIC-1.18□□□□□ -2.6
SDCBPO00560 MIR4499-201ENST00000584834 69 ntBASIC-1.18□□□□□ -2.6
SDCBPO00560 uc_338.19-201ENST00000616808 99 ntBASIC-1.18□□□□□ -2.6
SDCBPO00560 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.19□□□□□ -2.6
SDCBPO00560 SNORD64-201ENST00000386683 67 ntBASIC-1.19□□□□□ -2.6
SDCBPO00560 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.19□□□□□ -2.6
SDCBPO00560 Y_RNA.651-201ENST00000459380 103 ntBASIC-1.19□□□□□ -2.6
SDCBPO00560 MIR4643-201ENST00000577473 78 ntBASIC-1.19□□□□□ -2.6
SDCBPO00560 MIR4696-201ENST00000581431 70 ntBASIC-1.19□□□□□ -2.6
SDCBPO00560 Y_RNA.773-201ENST00000607168 90 ntBASIC-1.19□□□□□ -2.6
SDCBPO00560 AC139792.2-201ENST00000624218 587 ntBASIC-1.19□□□□□ -2.6
SDCBPO00560 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.2□□□□□ -2.6
SDCBPO00560 Y_RNA.76-201ENST00000362931 109 ntBASIC-1.2□□□□□ -2.6
SDCBPO00560 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.2□□□□□ -2.6
SDCBPO00560 SNORD74.6-201ENST00000364796 70 ntBASIC-1.2□□□□□ -2.6
SDCBPO00560 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.2□□□□□ -2.6
SDCBPO00560 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.2□□□□□ -2.6
SDCBPO00560 RNU6-592P-201ENST00000411333 103 ntBASIC-1.2□□□□□ -2.6
SDCBPO00560 MTATP6P23-201ENST00000440153 476 ntBASIC-1.2□□□□□ -2.6
SDCBPO00560 SNORD2-201ENST00000459163 69 ntBASIC-1.2□□□□□ -2.6
SDCBPO00560 Y_RNA.797-201ENST00000515977 94 ntBASIC-1.2□□□□□ -2.6
SDCBPO00560 RNA5SP395-201ENST00000516567 118 ntBASIC-1.2□□□□□ -2.6
SDCBPO00560 RNU6-521P-201ENST00000516663 105 ntBASIC-1.2□□□□□ -2.6
SDCBPO00560 RNY4P20-201ENST00000516678 93 ntBASIC-1.2□□□□□ -2.6
SDCBPO00560 AC113195.1-201ENST00000579952 141 ntBASIC-1.2□□□□□ -2.6
SDCBPO00560 SNORD42.2-201ENST00000365570 69 ntBASIC-1.21□□□□□ -2.6
SDCBPO00560 SNORD101-201ENST00000384027 73 ntBASIC-1.21□□□□□ -2.6
SDCBPO00560 RNU6-768P-201ENST00000384683 107 ntBASIC-1.21□□□□□ -2.6
SDCBPO00560 AC113618.1-201ENST00000416747 285 ntBASIC-1.21□□□□□ -2.6
SDCBPO00560 AL353813.1-201ENST00000440700 253 ntBASIC-1.21□□□□□ -2.6
SDCBPO00560 RNU6-1143P-201ENST00000516125 104 ntBASIC-1.21□□□□□ -2.6
SDCBPO00560 RNU6-664P-201ENST00000362381 107 ntBASIC-1.22□□□□□ -2.6
SDCBPO00560 RNU6-235P-201ENST00000362644 107 ntBASIC-1.22□□□□□ -2.6
SDCBPO00560 Y_RNA.527-201ENST00000384573 102 ntBASIC-1.22□□□□□ -2.6
SDCBPO00560 MIR147A-201ENST00000385079 72 ntBASIC-1.22□□□□□ -2.6
SDCBPO00560 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-1.22□□□□□ -2.6
SDCBPO00560 SNORD42B-201ENST00000458893 67 ntBASIC-1.22□□□□□ -2.6
SDCBPO00560 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.22□□□□□ -2.6
SDCBPO00560 AP002392.1-201ENST00000537692 208 ntBASIC-1.22□□□□□ -2.6
SDCBPO00560 Y_RNA.153-201ENST00000363615 91 ntBASIC-1.23□□□□□ -2.61
SDCBPO00560 Y_RNA.308-201ENST00000365043 101 ntBASIC-1.23□□□□□ -2.61
SDCBPO00560 Y_RNA.356-201ENST00000365475 113 ntBASIC-1.23□□□□□ -2.61
SDCBPO00560 Y_RNA.455-201ENST00000384230 98 ntBASIC-1.23□□□□□ -2.61
SDCBPO00560 Y_RNA.497-201ENST00000384447 98 ntBASIC-1.23□□□□□ -2.61
SDCBPO00560 SNORD38.2-201ENST00000384470 69 ntBASIC-1.23□□□□□ -2.61
SDCBPO00560 Y_RNA.571-201ENST00000384753 98 ntBASIC-1.23□□□□□ -2.61
SDCBPO00560 MT-TI-201ENST00000387365 69 ntBASIC-1.23□□□□□ -2.61
SDCBPO00560 RNU6-1006P-201ENST00000516998 103 ntBASIC-1.23□□□□□ -2.61
SDCBPO00560 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.23□□□□□ -2.61
SDCBPO00560 AC140658.3-201ENST00000567603 271 ntBASIC-1.23□□□□□ -2.61
SDCBPO00560 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.24□□□□□ -2.61
SDCBPO00560 RNU6-493P-201ENST00000391321 108 ntBASIC-1.24□□□□□ -2.61
SDCBPO00560 SCARNA18B-201ENST00000458806 135 ntBASIC-1.24□□□□□ -2.61
SDCBPO00560 SCARNA17-201ENST00000516183 144 ntBASIC-1.24□□□□□ -2.61
SDCBPO00560 RNU6-875P-201ENST00000516488 106 ntBASIC-1.24□□□□□ -2.61
SDCBPO00560 MIR548AX-201ENST00000580117 73 ntBASIC-1.24□□□□□ -2.61
SDCBPO00560 MIR6773-201ENST00000612812 74 ntBASIC-1.24□□□□□ -2.61
SDCBPO00560 MIR382-201ENST00000637119 76 ntBASIC-1.24□□□□□ -2.61
SDCBPO00560 Y_RNA.182-201ENST00000363880 111 ntBASIC-1.25□□□□□ -2.61
SDCBPO00560 SNORD115-23-201ENST00000364461 82 ntBASIC-1.25□□□□□ -2.61
SDCBPO00560 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.25□□□□□ -2.61
SDCBPO00560 SNORD114-15-201ENST00000364687 72 ntBASIC-1.25□□□□□ -2.61
SDCBPO00560 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.25□□□□□ -2.61
SDCBPO00560 RNU6-818P-201ENST00000364837 108 ntBASIC-1.25□□□□□ -2.61
SDCBPO00560 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.25□□□□□ -2.61
SDCBPO00560 MIR216B-201ENST00000390186 82 ntBASIC-1.25□□□□□ -2.61
SDCBPO00560 RNU6-337P-201ENST00000391243 106 ntBASIC-1.25□□□□□ -2.61
SDCBPO00560 MTATP6P21-201ENST00000440681 189 ntBASIC-1.25□□□□□ -2.61
SDCBPO00560 RBMX2P4-201ENST00000441256 376 ntBASIC-1.25□□□□□ -2.61
SDCBPO00560 MTND3P22-201ENST00000510932 243 ntBASIC-1.25□□□□□ -2.61
SDCBPO00560 RNU7-6P-201ENST00000516845 62 ntBASIC-1.25□□□□□ -2.61
SDCBPO00560 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.25□□□□□ -2.61
SDCBPO00560 MIR3149-201ENST00000584629 83 ntBASIC-1.25□□□□□ -2.61
SDCBPO00560 AC108081.1-201ENST00000604358 221 ntBASIC-1.25□□□□□ -2.61
SDCBPO00560 U6atac.1-201ENST00000616025 117 ntBASIC-1.25□□□□□ -2.61
SDCBPO00560 MIR1255B1-201ENST00000636325 63 ntBASIC-1.25□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 170.8 ms