Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-2.56□□□□□ -2.82
HMGN4O00479 SNORA75-201ENST00000384158 137 ntBASIC-2.57□□□□□ -2.82
HMGN4O00479 Y_RNA.482-201ENST00000384377 111 ntBASIC-2.57□□□□□ -2.82
HMGN4O00479 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-2.57□□□□□ -2.82
HMGN4O00479 Y_RNA.176-201ENST00000363815 109 ntBASIC-2.58□□□□□ -2.82
HMGN4O00479 RNU6-990P-201ENST00000364385 104 ntBASIC-2.58□□□□□ -2.82
HMGN4O00479 RNU6-483P-201ENST00000384088 108 ntBASIC-2.58□□□□□ -2.82
HMGN4O00479 RNU6-1148P-201ENST00000410992 104 ntBASIC-2.58□□□□□ -2.82
HMGN4O00479 AL445567.1-201ENST00000439121 144 ntBASIC-2.58□□□□□ -2.82
HMGN4O00479 MIR1321-201ENST00000637766 79 ntBASIC-2.58□□□□□ -2.82
HMGN4O00479 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.59□□□□□ -2.82
HMGN4O00479 Y_RNA.558-201ENST00000384685 113 ntBASIC-2.59□□□□□ -2.82
HMGN4O00479 MIR1255B2-201ENST00000408618 67 ntBASIC-2.59□□□□□ -2.82
HMGN4O00479 AC090616.4-201ENST00000448026 115 ntBASIC-2.59□□□□□ -2.82
HMGN4O00479 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-2.59□□□□□ -2.82
HMGN4O00479 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.59□□□□□ -2.82
HMGN4O00479 VN1R91P-201ENST00000594377 169 ntBASIC-2.59□□□□□ -2.82
HMGN4O00479 AL359880.1-201ENST00000621879 266 ntBASIC-2.59□□□□□ -2.82
HMGN4O00479 RNU6-495P-201ENST00000362995 107 ntBASIC-2.6□□□□□ -2.83
HMGN4O00479 Y_RNA.143-201ENST00000363520 106 ntBASIC-2.6□□□□□ -2.83
HMGN4O00479 Y_RNA.152-201ENST00000363578 100 ntBASIC-2.6□□□□□ -2.83
HMGN4O00479 RNU6-373P-201ENST00000411247 98 ntBASIC-2.6□□□□□ -2.83
HMGN4O00479 AC018880.2-201ENST00000414265 201 ntBASIC-2.6□□□□□ -2.83
HMGN4O00479 RNU7-164P-201ENST00000459221 62 ntBASIC-2.6□□□□□ -2.83
HMGN4O00479 FGF7P4-201ENST00000509595 295 ntBASIC-2.6□□□□□ -2.83
HMGN4O00479 AC009094.1-201ENST00000564443 426 ntBASIC-2.6□□□□□ -2.83
HMGN4O00479 MIR3139-201ENST00000579145 76 ntBASIC-2.6□□□□□ -2.83
HMGN4O00479 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-2.6□□□□□ -2.83
HMGN4O00479 FAS-AS1.1-201ENST00000615327 126 ntBASIC-2.6□□□□□ -2.83
HMGN4O00479 MIR5683-201ENST00000636514 76 ntBASIC-2.6□□□□□ -2.83
HMGN4O00479 Y_RNA.5-201ENST00000362334 102 ntBASIC-2.61□□□□□ -2.83
HMGN4O00479 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.61□□□□□ -2.83
HMGN4O00479 RNU6-1090P-201ENST00000364065 94 ntBASIC-2.61□□□□□ -2.83
HMGN4O00479 Y_RNA.348-201ENST00000365403 103 ntBASIC-2.61□□□□□ -2.83
HMGN4O00479 MIR548F5-201ENST00000408421 86 ntBASIC-2.61□□□□□ -2.83
HMGN4O00479 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-2.61□□□□□ -2.83
HMGN4O00479 SNORD116-25-201ENST00000516517 92 ntBASIC-2.61□□□□□ -2.83
HMGN4O00479 AC048344.4-201ENST00000619744 527 ntBASIC-2.61□□□□□ -2.83
HMGN4O00479 DLEU2_3.1-201ENST00000620005 73 ntBASIC-2.61□□□□□ -2.83
HMGN4O00479 RNU6-978P-201ENST00000364371 103 ntBASIC-2.62□□□□□ -2.83
HMGN4O00479 MIR616-201ENST00000385293 97 ntBASIC-2.62□□□□□ -2.83
HMGN4O00479 AC096644.2-201ENST00000429278 159 ntBASIC-2.62□□□□□ -2.83
HMGN4O00479 RNU7-123P-201ENST00000515911 60 ntBASIC-2.62□□□□□ -2.83
HMGN4O00479 Y_RNA.713-201ENST00000517013 96 ntBASIC-2.62□□□□□ -2.83
HMGN4O00479 RNU6-1238P-201ENST00000517215 102 ntBASIC-2.62□□□□□ -2.83
HMGN4O00479 AC021443.1-201ENST00000604478 211 ntBASIC-2.62□□□□□ -2.83
HMGN4O00479 Y_RNA.175-201ENST00000363794 111 ntBASIC-2.63□□□□□ -2.83
HMGN4O00479 Y_RNA.314-201ENST00000365114 102 ntBASIC-2.63□□□□□ -2.83
HMGN4O00479 Y_RNA.340-201ENST00000365330 92 ntBASIC-2.63□□□□□ -2.83
HMGN4O00479 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-2.63□□□□□ -2.83
HMGN4O00479 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-2.63□□□□□ -2.83
HMGN4O00479 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-2.63□□□□□ -2.83
HMGN4O00479 AP002795.1-201ENST00000534879 84 ntBASIC-2.63□□□□□ -2.83
HMGN4O00479 AC024614.3-201ENST00000637860 256 ntBASIC-2.63□□□□□ -2.83
HMGN4O00479 Y_RNA.569-201ENST00000384749 103 ntBASIC-2.64□□□□□ -2.83
HMGN4O00479 MIR181A1-201ENST00000385026 110 ntBASIC-2.64□□□□□ -2.83
HMGN4O00479 MIR620-201ENST00000385232 95 ntBASIC-2.64□□□□□ -2.83
HMGN4O00479 RNU6-1052P-201ENST00000411398 104 ntBASIC-2.64□□□□□ -2.83
HMGN4O00479 RNU6-719P-201ENST00000516671 104 ntBASIC-2.64□□□□□ -2.83
HMGN4O00479 RNU6-453P-201ENST00000516819 85 ntBASIC-2.64□□□□□ -2.83
HMGN4O00479 DLEU2_2.2-201ENST00000615474 90 ntBASIC-2.64□□□□□ -2.83
HMGN4O00479 snoU18.1-201ENST00000629629 71 ntBASIC-2.64□□□□□ -2.83
HMGN4O00479 RNU6-79P-201ENST00000362511 107 ntBASIC-2.65□□□□□ -2.83
HMGN4O00479 Y_RNA.71-201ENST00000362892 104 ntBASIC-2.65□□□□□ -2.83
HMGN4O00479 SNORA15B-2-201ENST00000384058 135 ntBASIC-2.65□□□□□ -2.83
HMGN4O00479 Y_RNA.441-201ENST00000384123 112 ntBASIC-2.65□□□□□ -2.83
HMGN4O00479 SNORA15B-1-201ENST00000384334 135 ntBASIC-2.65□□□□□ -2.83
HMGN4O00479 Y_RNA.491-201ENST00000384417 107 ntBASIC-2.65□□□□□ -2.83
HMGN4O00479 RNU4-43P-201ENST00000410628 137 ntBASIC-2.65□□□□□ -2.83
HMGN4O00479 AC138907.4-201ENST00000570107 226 ntBASIC-2.65□□□□□ -2.83
HMGN4O00479 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.65□□□□□ -2.83
HMGN4O00479 RNA5SP405-201ENST00000363059 114 ntBASIC-2.66□□□□□ -2.84
HMGN4O00479 Y_RNA.117-201ENST00000363294 101 ntBASIC-2.66□□□□□ -2.84
HMGN4O00479 Y_RNA.217-201ENST00000364214 105 ntBASIC-2.66□□□□□ -2.84
HMGN4O00479 RNU6-780P-201ENST00000391030 104 ntBASIC-2.66□□□□□ -2.84
HMGN4O00479 RPL35AP4-201ENST00000412007 102 ntBASIC-2.66□□□□□ -2.84
HMGN4O00479 Y_RNA.641-201ENST00000459414 105 ntBASIC-2.66□□□□□ -2.84
HMGN4O00479 FGF7P7-201ENST00000514120 227 ntBASIC-2.66□□□□□ -2.84
HMGN4O00479 RNU6-561P-201ENST00000516222 102 ntBASIC-2.66□□□□□ -2.84
HMGN4O00479 AC124864.2-201ENST00000624736 186 ntBASIC-2.66□□□□□ -2.84
HMGN4O00479 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.67□□□□□ -2.84
HMGN4O00479 RNA5SP236-201ENST00000516169 116 ntBASIC-2.67□□□□□ -2.84
HMGN4O00479 AP000720.1-201ENST00000625091 483 ntBASIC-2.67□□□□□ -2.84
HMGN4O00479 Y_RNA.88-201ENST00000363029 99 ntBASIC-2.68□□□□□ -2.84
HMGN4O00479 snoU2_19.4-201ENST00000364329 80 ntBASIC-2.68□□□□□ -2.84
HMGN4O00479 Y_RNA.339-201ENST00000365325 102 ntBASIC-2.68□□□□□ -2.84
HMGN4O00479 RNU6-662P-201ENST00000384253 104 ntBASIC-2.68□□□□□ -2.84
HMGN4O00479 SNORD19-201ENST00000391191 68 ntBASIC-2.68□□□□□ -2.84
HMGN4O00479 Y_RNA.639-201ENST00000458981 102 ntBASIC-2.68□□□□□ -2.84
HMGN4O00479 U8.20-201ENST00000459445 131 ntBASIC-2.68□□□□□ -2.84
HMGN4O00479 RNU6-240P-201ENST00000516098 97 ntBASIC-2.68□□□□□ -2.84
HMGN4O00479 RNU7-154P-201ENST00000516194 62 ntBASIC-2.68□□□□□ -2.84
HMGN4O00479 CYP3A54P-201ENST00000566950 75 ntBASIC-2.68□□□□□ -2.84
HMGN4O00479 MIR548A1-201ENST00000385041 97 ntBASIC-2.69□□□□□ -2.84
HMGN4O00479 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-2.69□□□□□ -2.84
HMGN4O00479 RNU6-521P-201ENST00000516663 105 ntBASIC-2.69□□□□□ -2.84
HMGN4O00479 Y_RNA.3-201ENST00000362331 103 ntBASIC-2.7□□□□□ -2.84
HMGN4O00479 SNORA33.1-201ENST00000364957 130 ntBASIC-2.7□□□□□ -2.84
HMGN4O00479 Y_RNA.474-201ENST00000384341 102 ntBASIC-2.7□□□□□ -2.84
HMGN4O00479 MT-TM-201ENST00000387377 68 ntBASIC-2.7□□□□□ -2.84
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms