Protein–RNA interactions for Protein: O00470

MEIS1, Homeobox protein Meis1, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS1O00470 SNORD92-201ENST00000585078 85 ntBASIC1.53□□□□□ -2.16
MEIS1O00470 AC006160.2-201ENST00000637708 154 ntBASIC1.53□□□□□ -2.16
MEIS1O00470 AL161722.3-201ENST00000605789 2983 ntBASIC1.53□□□□□ -2.17
MEIS1O00470 Y_RNA.56-201ENST00000362798 112 ntBASIC1.52□□□□□ -2.17
MEIS1O00470 SNORA72.6-201ENST00000384520 129 ntBASIC1.52□□□□□ -2.17
MEIS1O00470 MIR516A2-201ENST00000384888 90 ntBASIC1.52□□□□□ -2.17
MEIS1O00470 MIR516A1-201ENST00000385033 90 ntBASIC1.52□□□□□ -2.17
MEIS1O00470 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.52□□□□□ -2.17
MEIS1O00470 MIR4676-201ENST00000583078 72 ntBASIC1.52□□□□□ -2.17
MEIS1O00470 AC013244.2-201ENST00000603396 103 ntBASIC1.52□□□□□ -2.17
MEIS1O00470 MIR548BB-201ENST00000626714 66 ntBASIC1.52□□□□□ -2.17
MEIS1O00470 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
MEIS1O00470 Y_RNA.224-201ENST00000364308 111 ntBASIC1.51□□□□□ -2.17
MEIS1O00470 SNORD115-27-201ENST00000364430 82 ntBASIC1.51□□□□□ -2.17
MEIS1O00470 RNU6-242P-201ENST00000384359 107 ntBASIC1.51□□□□□ -2.17
MEIS1O00470 SNORD78.1-201ENST00000390866 65 ntBASIC1.51□□□□□ -2.17
MEIS1O00470 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.51□□□□□ -2.17
MEIS1O00470 RNU6-519P-201ENST00000410590 108 ntBASIC1.51□□□□□ -2.17
MEIS1O00470 SNORD63B-201ENST00000411005 70 ntBASIC1.51□□□□□ -2.17
MEIS1O00470 RNU1-123P-201ENST00000458950 160 ntBASIC1.51□□□□□ -2.17
MEIS1O00470 RNU7-106P-201ENST00000459514 67 ntBASIC1.51□□□□□ -2.17
MEIS1O00470 RNA5SP395-201ENST00000516567 118 ntBASIC1.51□□□□□ -2.17
MEIS1O00470 SNORA70.22-201ENST00000517160 124 ntBASIC1.51□□□□□ -2.17
MEIS1O00470 MIR4666B-201ENST00000578142 81 ntBASIC1.51□□□□□ -2.17
MEIS1O00470 MIR3660-201ENST00000584845 100 ntBASIC1.51□□□□□ -2.17
MEIS1O00470 RNU7-10P-201ENST00000607194 63 ntBASIC1.51□□□□□ -2.17
MEIS1O00470 MIR6504-201ENST00000613520 61 ntBASIC1.51□□□□□ -2.17
MEIS1O00470 MIR3202-2-201ENST00000635980 79 ntBASIC1.51□□□□□ -2.17
MEIS1O00470 Y_RNA.191-201ENST00000363972 113 ntBASIC1.5□□□□□ -2.17
MEIS1O00470 RNU6-787P-201ENST00000384032 107 ntBASIC1.5□□□□□ -2.17
MEIS1O00470 Y_RNA.426-201ENST00000384068 113 ntBASIC1.5□□□□□ -2.17
MEIS1O00470 AC015818.7-201ENST00000428754 109 ntBASIC1.5□□□□□ -2.17
MEIS1O00470 AC004223.1-201ENST00000479840 271 ntBASIC1.5□□□□□ -2.17
MEIS1O00470 MIR548H5-201ENST00000580314 60 ntBASIC1.5□□□□□ -2.17
MEIS1O00470 AL353770.2-201ENST00000620024 78 ntBASIC1.5□□□□□ -2.17
MEIS1O00470 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
MEIS1O00470 snoU13.18-201ENST00000459483 104 ntBASIC1.49□□□□□ -2.17
MEIS1O00470 TRAJ51-201ENST00000504127 63 ntBASIC1.49□□□□□ -2.17
MEIS1O00470 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
MEIS1O00470 Y_RNA.536-201ENST00000384621 113 ntBASIC1.48□□□□□ -2.17
MEIS1O00470 MIR758-201ENST00000390227 88 ntBASIC1.48□□□□□ -2.17
MEIS1O00470 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
MEIS1O00470 RNU7-156P-201ENST00000517214 74 ntBASIC1.48□□□□□ -2.17
MEIS1O00470 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.48□□□□□ -2.17
MEIS1O00470 MIR4804-201ENST00000581683 73 ntBASIC1.48□□□□□ -2.17
MEIS1O00470 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
MEIS1O00470 MIR101-2-201ENST00000362195 79 ntBASIC1.47□□□□□ -2.17
MEIS1O00470 RNU6-228P-201ENST00000362700 106 ntBASIC1.47□□□□□ -2.17
MEIS1O00470 RNU6-1260P-201ENST00000362944 107 ntBASIC1.47□□□□□ -2.17
MEIS1O00470 MIR635-201ENST00000384830 98 ntBASIC1.47□□□□□ -2.17
MEIS1O00470 MIR519C-201ENST00000385053 87 ntBASIC1.47□□□□□ -2.17
MEIS1O00470 RNU6-243P-201ENST00000391140 107 ntBASIC1.47□□□□□ -2.17
MEIS1O00470 SNORA40.6-201ENST00000391153 128 ntBASIC1.47□□□□□ -2.17
MEIS1O00470 MIR938-201ENST00000401216 83 ntBASIC1.47□□□□□ -2.17
MEIS1O00470 Y_RNA.611-201ENST00000410682 108 ntBASIC1.47□□□□□ -2.17
MEIS1O00470 AC002429.1-201ENST00000437672 148 ntBASIC1.47□□□□□ -2.17
MEIS1O00470 snoU13.11-201ENST00000459219 104 ntBASIC1.47□□□□□ -2.17
MEIS1O00470 RNU6-75P-201ENST00000515944 104 ntBASIC1.47□□□□□ -2.17
MEIS1O00470 RNU6-448P-201ENST00000517052 107 ntBASIC1.47□□□□□ -2.17
MEIS1O00470 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.47□□□□□ -2.17
MEIS1O00470 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.47□□□□□ -2.17
MEIS1O00470 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.47□□□□□ -2.17
MEIS1O00470 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
MEIS1O00470 MIR1827-201ENST00000408549 66 ntBASIC1.46□□□□□ -2.18
MEIS1O00470 Y_RNA.607-201ENST00000410597 98 ntBASIC1.46□□□□□ -2.18
MEIS1O00470 AC092628.1-201ENST00000436250 252 ntBASIC1.46□□□□□ -2.18
MEIS1O00470 RNU7-56P-201ENST00000458744 62 ntBASIC1.46□□□□□ -2.18
MEIS1O00470 AC068338.1-201ENST00000565567 176 ntBASIC1.46□□□□□ -2.18
MEIS1O00470 AC027335.2-201ENST00000624030 375 ntBASIC1.46□□□□□ -2.18
MEIS1O00470 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
MEIS1O00470 Y_RNA.283-201ENST00000364798 112 ntBASIC1.45□□□□□ -2.18
MEIS1O00470 SNORD26-201ENST00000384147 75 ntBASIC1.45□□□□□ -2.18
MEIS1O00470 RNU6-524P-201ENST00000384270 107 ntBASIC1.45□□□□□ -2.18
MEIS1O00470 SNORA25-201ENST00000384384 134 ntBASIC1.45□□□□□ -2.18
MEIS1O00470 AL157834.3-201ENST00000615543 103 ntBASIC1.45□□□□□ -2.18
MEIS1O00470 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
MEIS1O00470 RNA5SP327-201ENST00000362494 101 ntBASIC1.44□□□□□ -2.18
MEIS1O00470 RNU6-1124P-201ENST00000384169 107 ntBASIC1.44□□□□□ -2.18
MEIS1O00470 MIR19B1-201ENST00000384829 87 ntBASIC1.44□□□□□ -2.18
MEIS1O00470 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
MEIS1O00470 RNU6-994P-201ENST00000410507 111 ntBASIC1.44□□□□□ -2.18
MEIS1O00470 AC097635.1-201ENST00000450678 155 ntBASIC1.44□□□□□ -2.18
MEIS1O00470 RNU7-102P-201ENST00000458948 62 ntBASIC1.44□□□□□ -2.18
MEIS1O00470 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
MEIS1O00470 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.43□□□□□ -2.18
MEIS1O00470 MIR1236-201ENST00000408340 102 ntBASIC1.43□□□□□ -2.18
MEIS1O00470 RNU7-195P-201ENST00000458793 62 ntBASIC1.43□□□□□ -2.18
MEIS1O00470 AC093729.1-201ENST00000513074 128 ntBASIC1.43□□□□□ -2.18
MEIS1O00470 Y_RNA.697-201ENST00000516776 113 ntBASIC1.43□□□□□ -2.18
MEIS1O00470 RNA5SP102-201ENST00000516865 106 ntBASIC1.43□□□□□ -2.18
MEIS1O00470 RNU6-364P-201ENST00000384387 107 ntBASIC1.42□□□□□ -2.18
MEIS1O00470 RNU6-291P-201ENST00000384720 107 ntBASIC1.42□□□□□ -2.18
MEIS1O00470 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.42□□□□□ -2.18
MEIS1O00470 AC140658.3-201ENST00000567603 271 ntBASIC1.42□□□□□ -2.18
MEIS1O00470 AC138907.6-201ENST00000568401 126 ntBASIC1.42□□□□□ -2.18
MEIS1O00470 AC138869.1-201ENST00000568623 124 ntBASIC1.42□□□□□ -2.18
MEIS1O00470 MIR4452-201ENST00000583004 71 ntBASIC1.42□□□□□ -2.18
MEIS1O00470 AC008608.1-201ENST00000603910 127 ntBASIC1.42□□□□□ -2.18
MEIS1O00470 MIR1-1-201ENST00000362147 71 ntBASIC1.41□□□□□ -2.18
MEIS1O00470 RNU6-466P-201ENST00000391224 103 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 187.8 ms