Protein–RNA interactions for Protein: A6NHR9

SMCHD1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, humanhuman

Predictions only

Length 2,005 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1A6NHR9 SNORD20-201ENST00000384550 80 ntBASIC0.6□□□□□ -2.31
SMCHD1A6NHR9 MIR516A2-201ENST00000384888 90 ntBASIC0.6□□□□□ -2.31
SMCHD1A6NHR9 MIR516A1-201ENST00000385033 90 ntBASIC0.6□□□□□ -2.31
SMCHD1A6NHR9 MIR140-201ENST00000385282 100 ntBASIC0.6□□□□□ -2.31
SMCHD1A6NHR9 RNU7-61P-201ENST00000515897 61 ntBASIC0.6□□□□□ -2.31
SMCHD1A6NHR9 RNU6-1006P-201ENST00000516998 103 ntBASIC0.6□□□□□ -2.31
SMCHD1A6NHR9 U6.95-201ENST00000636931 70 ntBASIC0.6□□□□□ -2.31
SMCHD1A6NHR9 Y_RNA.348-201ENST00000365403 103 ntBASIC0.59□□□□□ -2.31
SMCHD1A6NHR9 RNU6-1201P-201ENST00000384227 107 ntBASIC0.59□□□□□ -2.31
SMCHD1A6NHR9 AC098934.3-201ENST00000430450 190 ntBASIC0.59□□□□□ -2.31
SMCHD1A6NHR9 AC097635.1-201ENST00000450678 155 ntBASIC0.59□□□□□ -2.31
SMCHD1A6NHR9 AC067940.1-201ENST00000458411 300 ntBASIC0.59□□□□□ -2.31
SMCHD1A6NHR9 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.59□□□□□ -2.31
SMCHD1A6NHR9 AC018659.1-201ENST00000551083 169 ntBASIC0.59□□□□□ -2.31
SMCHD1A6NHR9 MIR3613-201ENST00000579844 87 ntBASIC0.59□□□□□ -2.31
SMCHD1A6NHR9 RNU6-90P-201ENST00000606352 106 ntBASIC0.59□□□□□ -2.31
SMCHD1A6NHR9 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.59□□□□□ -2.32
SMCHD1A6NHR9 RNU6-110P-201ENST00000384508 104 ntBASIC0.59□□□□□ -2.32
SMCHD1A6NHR9 MIR617-201ENST00000385030 97 ntBASIC0.59□□□□□ -2.32
SMCHD1A6NHR9 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.59□□□□□ -2.32
SMCHD1A6NHR9 RNU6-521P-201ENST00000516663 105 ntBASIC0.59□□□□□ -2.32
SMCHD1A6NHR9 MIR8087-201ENST00000612745 78 ntBASIC0.59□□□□□ -2.32
SMCHD1A6NHR9 AC092634.7-201ENST00000621022 103 ntBASIC0.59□□□□□ -2.32
SMCHD1A6NHR9 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
SMCHD1A6NHR9 SNORA9.1-201ENST00000362412 131 ntBASIC0.58□□□□□ -2.32
SMCHD1A6NHR9 MIR588-201ENST00000384900 83 ntBASIC0.58□□□□□ -2.32
SMCHD1A6NHR9 AC091304.10-201ENST00000641554 121 ntBASIC0.58□□□□□ -2.32
SMCHD1A6NHR9 AC073869.9-201ENST00000641610 120 ntBASIC0.58□□□□□ -2.32
SMCHD1A6NHR9 SNORD45B-201ENST00000364617 72 ntBASIC0.57□□□□□ -2.32
SMCHD1A6NHR9 Y_RNA.549-201ENST00000384657 102 ntBASIC0.57□□□□□ -2.32
SMCHD1A6NHR9 RNU7-6P-201ENST00000516845 62 ntBASIC0.57□□□□□ -2.32
SMCHD1A6NHR9 U2.22-201ENST00000636441 106 ntBASIC0.57□□□□□ -2.32
SMCHD1A6NHR9 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
SMCHD1A6NHR9 RNU6-476P-201ENST00000384726 107 ntBASIC0.57□□□□□ -2.32
SMCHD1A6NHR9 MIR548A1-201ENST00000385041 97 ntBASIC0.57□□□□□ -2.32
SMCHD1A6NHR9 AL606490.4-201ENST00000423117 127 ntBASIC0.57□□□□□ -2.32
SMCHD1A6NHR9 RNU6-469P-201ENST00000516253 101 ntBASIC0.57□□□□□ -2.32
SMCHD1A6NHR9 AL353765.1-201ENST00000605514 183 ntBASIC0.57□□□□□ -2.32
SMCHD1A6NHR9 AC020891.4-201ENST00000605745 93 ntBASIC0.57□□□□□ -2.32
SMCHD1A6NHR9 MIR2909-201ENST00000617113 69 ntBASIC0.57□□□□□ -2.32
SMCHD1A6NHR9 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.57□□□□□ -2.32
SMCHD1A6NHR9 Y_RNA.13-201ENST00000362403 112 ntBASIC0.56□□□□□ -2.32
SMCHD1A6NHR9 RNU6-1260P-201ENST00000362944 107 ntBASIC0.56□□□□□ -2.32
SMCHD1A6NHR9 SNORD38.1-201ENST00000363863 68 ntBASIC0.56□□□□□ -2.32
SMCHD1A6NHR9 SNORA32-201ENST00000384072 121 ntBASIC0.56□□□□□ -2.32
SMCHD1A6NHR9 AC114737.2-201ENST00000421583 173 ntBASIC0.56□□□□□ -2.32
SMCHD1A6NHR9 Y_RNA.677-201ENST00000516401 85 ntBASIC0.56□□□□□ -2.32
SMCHD1A6NHR9 RNU6-919P-201ENST00000516731 104 ntBASIC0.56□□□□□ -2.32
SMCHD1A6NHR9 MIR2052-201ENST00000636055 55 ntBASIC0.56□□□□□ -2.32
SMCHD1A6NHR9 SNORA72.6-201ENST00000384520 129 ntBASIC0.55□□□□□ -2.32
SMCHD1A6NHR9 RNU6-880P-201ENST00000384526 107 ntBASIC0.55□□□□□ -2.32
SMCHD1A6NHR9 ACA64.5-201ENST00000516207 127 ntBASIC0.55□□□□□ -2.32
SMCHD1A6NHR9 MIR548AI-201ENST00000579940 88 ntBASIC0.55□□□□□ -2.32
SMCHD1A6NHR9 AL365222.1-201ENST00000614661 98 ntBASIC0.55□□□□□ -2.32
SMCHD1A6NHR9 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.55□□□□□ -2.32
SMCHD1A6NHR9 RNU6-1126P-201ENST00000384002 107 ntBASIC0.55□□□□□ -2.32
SMCHD1A6NHR9 RNU6-106P-201ENST00000384405 107 ntBASIC0.55□□□□□ -2.32
SMCHD1A6NHR9 SNORD28-201ENST00000384706 75 ntBASIC0.55□□□□□ -2.32
SMCHD1A6NHR9 RNU6-1254P-201ENST00000391266 104 ntBASIC0.55□□□□□ -2.32
SMCHD1A6NHR9 RNA5SP222-201ENST00000411039 105 ntBASIC0.55□□□□□ -2.32
SMCHD1A6NHR9 AP001362.1-201ENST00000625165 124 ntBASIC0.55□□□□□ -2.32
SMCHD1A6NHR9 Y_RNA.601-201ENST00000410500 113 ntBASIC0.54□□□□□ -2.32
SMCHD1A6NHR9 VTRNA1-3-201ENST00000365645 89 ntBASIC0.54□□□□□ -2.32
SMCHD1A6NHR9 RNY1P8-201ENST00000383970 114 ntBASIC0.54□□□□□ -2.32
SMCHD1A6NHR9 Y_RNA.567-201ENST00000384736 106 ntBASIC0.54□□□□□ -2.32
SMCHD1A6NHR9 RNU6-863P-201ENST00000515989 104 ntBASIC0.54□□□□□ -2.32
SMCHD1A6NHR9 RNU6-537P-201ENST00000517277 103 ntBASIC0.54□□□□□ -2.32
SMCHD1A6NHR9 Y_RNA.818-201ENST00000618813 71 ntBASIC0.54□□□□□ -2.32
SMCHD1A6NHR9 SNORD18A-201ENST00000363753 72 ntBASIC0.53□□□□□ -2.32
SMCHD1A6NHR9 SNORA19.1-201ENST00000410656 129 ntBASIC0.53□□□□□ -2.32
SMCHD1A6NHR9 RNU4-61P-201ENST00000411243 107 ntBASIC0.53□□□□□ -2.32
SMCHD1A6NHR9 SNORA25.18-201ENST00000607153 114 ntBASIC0.53□□□□□ -2.32
SMCHD1A6NHR9 RNY3P2-201ENST00000362918 102 ntBASIC0.52□□□□□ -2.33
SMCHD1A6NHR9 RNU6-571P-201ENST00000384128 107 ntBASIC0.52□□□□□ -2.33
SMCHD1A6NHR9 SNORD116-21-201ENST00000384507 92 ntBASIC0.52□□□□□ -2.33
SMCHD1A6NHR9 RNU6-243P-201ENST00000391140 107 ntBASIC0.52□□□□□ -2.33
SMCHD1A6NHR9 RNU6-664P-201ENST00000362381 107 ntBASIC0.52□□□□□ -2.33
SMCHD1A6NHR9 Y_RNA.56-201ENST00000362798 112 ntBASIC0.52□□□□□ -2.33
SMCHD1A6NHR9 RNA5SP117-201ENST00000365294 118 ntBASIC0.52□□□□□ -2.33
SMCHD1A6NHR9 AL158147.1-201ENST00000443970 75 ntBASIC0.51□□□□□ -2.33
SMCHD1A6NHR9 Y_RNA.78-201ENST00000362970 110 ntBASIC0.5□□□□□ -2.33
SMCHD1A6NHR9 Y_RNA.119-201ENST00000363301 96 ntBASIC0.5□□□□□ -2.33
SMCHD1A6NHR9 Y_RNA.323-201ENST00000365157 109 ntBASIC0.5□□□□□ -2.33
SMCHD1A6NHR9 Y_RNA.342-201ENST00000365352 113 ntBASIC0.5□□□□□ -2.33
SMCHD1A6NHR9 AL513043.2-201ENST00000573941 143 ntBASIC0.5□□□□□ -2.33
SMCHD1A6NHR9 RNU6-816P-201ENST00000390914 107 ntBASIC0.5□□□□□ -2.33
SMCHD1A6NHR9 RNU6-1307P-201ENST00000391012 103 ntBASIC0.5□□□□□ -2.33
SMCHD1A6NHR9 RNU6-1268P-201ENST00000391214 107 ntBASIC0.5□□□□□ -2.33
SMCHD1A6NHR9 RNU6-1239P-201ENST00000391310 107 ntBASIC0.5□□□□□ -2.33
SMCHD1A6NHR9 Y_RNA.596-201ENST00000410462 109 ntBASIC0.5□□□□□ -2.33
SMCHD1A6NHR9 Y_RNA.681-201ENST00000516445 113 ntBASIC0.5□□□□□ -2.33
SMCHD1A6NHR9 MIR4676-201ENST00000583078 72 ntBASIC0.5□□□□□ -2.33
SMCHD1A6NHR9 AL035470.1-201ENST00000622571 220 ntBASIC0.5□□□□□ -2.33
SMCHD1A6NHR9 AC067863.3-201ENST00000624172 122 ntBASIC0.5□□□□□ -2.33
SMCHD1A6NHR9 Y_RNA.10-201ENST00000362371 110 ntBASIC0.49□□□□□ -2.33
SMCHD1A6NHR9 MIR548L-201ENST00000408303 86 ntBASIC0.49□□□□□ -2.33
SMCHD1A6NHR9 RNU6-554P-201ENST00000410466 106 ntBASIC0.49□□□□□ -2.33
SMCHD1A6NHR9 RNA5SP121-201ENST00000516537 101 ntBASIC0.49□□□□□ -2.33
SMCHD1A6NHR9 RNU6-850P-201ENST00000516934 103 ntBASIC0.49□□□□□ -2.33
SMCHD1A6NHR9 AC068339.1-201ENST00000526965 141 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 195.9 ms