Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 RNU6-614P-201ENST00000384369 107 ntBASIC2.53□□□□□ -2
PCDHB3Q9Y5E6 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.53□□□□□ -2
PCDHB3Q9Y5E6 MIR1257-201ENST00000408490 117 ntBASIC2.53□□□□□ -2
PCDHB3Q9Y5E6 MIR1261-201ENST00000408659 82 ntBASIC2.53□□□□□ -2
PCDHB3Q9Y5E6 AC079150.2-201ENST00000443733 78 ntBASIC2.53□□□□□ -2
PCDHB3Q9Y5E6 snoU13.21-201ENST00000459368 105 ntBASIC2.53□□□□□ -2
PCDHB3Q9Y5E6 RNU6-1265P-201ENST00000516342 103 ntBASIC2.53□□□□□ -2
PCDHB3Q9Y5E6 RNA5SP148-201ENST00000516527 94 ntBASIC2.53□□□□□ -2
PCDHB3Q9Y5E6 U6.59-201ENST00000615686 107 ntBASIC2.53□□□□□ -2
PCDHB3Q9Y5E6 RNU6-1177P-201ENST00000391058 104 ntBASIC2.52□□□□□ -2.01
PCDHB3Q9Y5E6 RNU6-765P-201ENST00000516916 99 ntBASIC2.52□□□□□ -2.01
PCDHB3Q9Y5E6 AL109933.3-201ENST00000619095 188 ntBASIC2.52□□□□□ -2.01
PCDHB3Q9Y5E6 MIR4773-1-201ENST00000637203 78 ntBASIC2.52□□□□□ -2.01
PCDHB3Q9Y5E6 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
PCDHB3Q9Y5E6 RNA5SP210-201ENST00000391034 120 ntBASIC2.51□□□□□ -2.01
PCDHB3Q9Y5E6 SNORA40.6-201ENST00000391153 128 ntBASIC2.51□□□□□ -2.01
PCDHB3Q9Y5E6 AC138907.6-201ENST00000568401 126 ntBASIC2.51□□□□□ -2.01
PCDHB3Q9Y5E6 AC138869.1-201ENST00000568623 124 ntBASIC2.51□□□□□ -2.01
PCDHB3Q9Y5E6 MIR4635-201ENST00000583759 79 ntBASIC2.51□□□□□ -2.01
PCDHB3Q9Y5E6 AC069503.3-201ENST00000618674 145 ntBASIC2.51□□□□□ -2.01
PCDHB3Q9Y5E6 ZNF658B-202ENST00000615961 3375 ntBASIC2.5□□□□□ -2.01
PCDHB3Q9Y5E6 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
PCDHB3Q9Y5E6 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
PCDHB3Q9Y5E6 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.5□□□□□ -2.01
PCDHB3Q9Y5E6 SNORD23.1-201ENST00000408212 104 ntBASIC2.5□□□□□ -2.01
PCDHB3Q9Y5E6 RNU6-274P-201ENST00000459566 107 ntBASIC2.5□□□□□ -2.01
PCDHB3Q9Y5E6 RNU6-752P-201ENST00000516376 102 ntBASIC2.5□□□□□ -2.01
PCDHB3Q9Y5E6 SNORD53-201ENST00000579969 78 ntBASIC2.5□□□□□ -2.01
PCDHB3Q9Y5E6 MIR5092-201ENST00000583139 88 ntBASIC2.5□□□□□ -2.01
PCDHB3Q9Y5E6 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.5□□□□□ -2.01
PCDHB3Q9Y5E6 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
PCDHB3Q9Y5E6 Y_RNA.258-201ENST00000364613 105 ntBASIC2.49□□□□□ -2.01
PCDHB3Q9Y5E6 RNA5SP181-201ENST00000410246 98 ntBASIC2.49□□□□□ -2.01
PCDHB3Q9Y5E6 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
PCDHB3Q9Y5E6 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
PCDHB3Q9Y5E6 RNU6-382P-201ENST00000365181 106 ntBASIC2.48□□□□□ -2.01
PCDHB3Q9Y5E6 RNA5SP24-201ENST00000516478 95 ntBASIC2.48□□□□□ -2.01
PCDHB3Q9Y5E6 SNORA77B-201ENST00000578179 125 ntBASIC2.48□□□□□ -2.01
PCDHB3Q9Y5E6 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PCDHB3Q9Y5E6 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PCDHB3Q9Y5E6 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
PCDHB3Q9Y5E6 U8.2-201ENST00000363156 134 ntBASIC2.47□□□□□ -2.01
PCDHB3Q9Y5E6 RNU6-1187P-201ENST00000364771 110 ntBASIC2.47□□□□□ -2.01
PCDHB3Q9Y5E6 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
PCDHB3Q9Y5E6 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.47□□□□□ -2.01
PCDHB3Q9Y5E6 SNORD83.1-201ENST00000411362 77 ntBASIC2.47□□□□□ -2.01
PCDHB3Q9Y5E6 AC244098.3-201ENST00000424803 96 ntBASIC2.47□□□□□ -2.01
PCDHB3Q9Y5E6 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC2.47□□□□□ -2.01
PCDHB3Q9Y5E6 RNU6-977P-201ENST00000516411 103 ntBASIC2.47□□□□□ -2.01
PCDHB3Q9Y5E6 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.47□□□□□ -2.01
PCDHB3Q9Y5E6 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PCDHB3Q9Y5E6 AC080100.1-201ENST00000624239 5356 ntBASIC2.46□□□□□ -2.01
PCDHB3Q9Y5E6 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
PCDHB3Q9Y5E6 MIR27B-201ENST00000385129 97 ntBASIC2.46□□□□□ -2.02
PCDHB3Q9Y5E6 SNORA31.11-201ENST00000516528 139 ntBASIC2.46□□□□□ -2.02
PCDHB3Q9Y5E6 RNA5SP82-201ENST00000516707 92 ntBASIC2.46□□□□□ -2.02
PCDHB3Q9Y5E6 RNU6-1057P-201ENST00000517162 102 ntBASIC2.46□□□□□ -2.02
PCDHB3Q9Y5E6 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.46□□□□□ -2.02
PCDHB3Q9Y5E6 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
PCDHB3Q9Y5E6 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
PCDHB3Q9Y5E6 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
PCDHB3Q9Y5E6 RNA5SP276-201ENST00000362580 94 ntBASIC2.45□□□□□ -2.02
PCDHB3Q9Y5E6 U3.27-201ENST00000391237 200 ntBASIC2.45□□□□□ -2.02
PCDHB3Q9Y5E6 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
PCDHB3Q9Y5E6 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
PCDHB3Q9Y5E6 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
PCDHB3Q9Y5E6 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
PCDHB3Q9Y5E6 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
PCDHB3Q9Y5E6 RNU6-982P-201ENST00000516216 102 ntBASIC2.44□□□□□ -2.02
PCDHB3Q9Y5E6 RNA5SP402-201ENST00000517148 110 ntBASIC2.44□□□□□ -2.02
PCDHB3Q9Y5E6 AL137847.3-201ENST00000611521 109 ntBASIC2.44□□□□□ -2.02
PCDHB3Q9Y5E6 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2.44□□□□□ -2.02
PCDHB3Q9Y5E6 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.44□□□□□ -2.02
PCDHB3Q9Y5E6 RNA5SP245-201ENST00000364239 121 ntBASIC2.43□□□□□ -2.02
PCDHB3Q9Y5E6 MIR125B2-201ENST00000385128 89 ntBASIC2.43□□□□□ -2.02
PCDHB3Q9Y5E6 RNA5SP212-201ENST00000391223 107 ntBASIC2.43□□□□□ -2.02
PCDHB3Q9Y5E6 AC055731.1-201ENST00000474387 401 ntBASIC2.43□□□□□ -2.02
PCDHB3Q9Y5E6 RNU6-287P-201ENST00000516230 98 ntBASIC2.43□□□□□ -2.02
PCDHB3Q9Y5E6 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.42□□□□□ -2.02
PCDHB3Q9Y5E6 RNA5SP320-201ENST00000516263 124 ntBASIC2.42□□□□□ -2.02
PCDHB3Q9Y5E6 AL078603.1-201ENST00000603824 313 ntBASIC2.42□□□□□ -2.02
PCDHB3Q9Y5E6 MIR6895-201ENST00000613497 78 ntBASIC2.42□□□□□ -2.02
PCDHB3Q9Y5E6 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.42□□□□□ -2.02
PCDHB3Q9Y5E6 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
PCDHB3Q9Y5E6 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.42□□□□□ -2.02
PCDHB3Q9Y5E6 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
PCDHB3Q9Y5E6 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
PCDHB3Q9Y5E6 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
PCDHB3Q9Y5E6 RNU6-934P-201ENST00000365154 107 ntBASIC2.41□□□□□ -2.02
PCDHB3Q9Y5E6 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
PCDHB3Q9Y5E6 RNA5SP425-201ENST00000410336 112 ntBASIC2.41□□□□□ -2.02
PCDHB3Q9Y5E6 AL645939.4-201ENST00000604495 135 ntBASIC2.41□□□□□ -2.02
PCDHB3Q9Y5E6 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
PCDHB3Q9Y5E6 RNU6-535P-201ENST00000384722 107 ntBASIC2.4□□□□□ -2.03
PCDHB3Q9Y5E6 RNU4-53P-201ENST00000410828 140 ntBASIC2.4□□□□□ -2.03
PCDHB3Q9Y5E6 AL691482.2-201ENST00000457453 84 ntBASIC2.4□□□□□ -2.03
PCDHB3Q9Y5E6 snoU13.26-201ENST00000459452 105 ntBASIC2.4□□□□□ -2.03
PCDHB3Q9Y5E6 MIR4771-2-201ENST00000577758 74 ntBASIC2.4□□□□□ -2.03
PCDHB3Q9Y5E6 MIR4771-1-201ENST00000582617 74 ntBASIC2.4□□□□□ -2.03
PCDHB3Q9Y5E6 SNORA67.3-201ENST00000384366 140 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 197.5 ms