Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 MIR450A1-201ENST00000362262 91 ntBASIC1.26□□□□□ -2.21
R3HCC1Q9Y3T6 SNORD38.1-201ENST00000363863 68 ntBASIC1.26□□□□□ -2.21
R3HCC1Q9Y3T6 RNU6-321P-201ENST00000410912 106 ntBASIC1.26□□□□□ -2.21
R3HCC1Q9Y3T6 BX276092.1-201ENST00000427368 251 ntBASIC1.26□□□□□ -2.21
R3HCC1Q9Y3T6 MIR4295-201ENST00000585286 85 ntBASIC1.26□□□□□ -2.21
R3HCC1Q9Y3T6 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
R3HCC1Q9Y3T6 Y_RNA.81-201ENST00000362997 102 ntBASIC1.25□□□□□ -2.21
R3HCC1Q9Y3T6 RNA5SP247-201ENST00000411181 105 ntBASIC1.25□□□□□ -2.21
R3HCC1Q9Y3T6 AC087343.1-201ENST00000477341 475 ntBASIC1.25□□□□□ -2.21
R3HCC1Q9Y3T6 RNU6-904P-201ENST00000516206 101 ntBASIC1.25□□□□□ -2.21
R3HCC1Q9Y3T6 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
R3HCC1Q9Y3T6 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
R3HCC1Q9Y3T6 RNU6-756P-201ENST00000383997 107 ntBASIC1.24□□□□□ -2.21
R3HCC1Q9Y3T6 SNORA51.5-201ENST00000384126 131 ntBASIC1.24□□□□□ -2.21
R3HCC1Q9Y3T6 MIR590-201ENST00000385008 97 ntBASIC1.24□□□□□ -2.21
R3HCC1Q9Y3T6 SNORD99-201ENST00000408612 74 ntBASIC1.24□□□□□ -2.21
R3HCC1Q9Y3T6 RNU6-1194P-201ENST00000516208 104 ntBASIC1.24□□□□□ -2.21
R3HCC1Q9Y3T6 AC025627.3-201ENST00000582078 182 ntBASIC1.24□□□□□ -2.21
R3HCC1Q9Y3T6 Y_RNA.78-201ENST00000362970 110 ntBASIC1.23□□□□□ -2.21
R3HCC1Q9Y3T6 AL031737.1-201ENST00000450125 223 ntBASIC1.23□□□□□ -2.21
R3HCC1Q9Y3T6 Y_RNA.697-201ENST00000516776 113 ntBASIC1.23□□□□□ -2.21
R3HCC1Q9Y3T6 RNU6-448P-201ENST00000517052 107 ntBASIC1.23□□□□□ -2.21
R3HCC1Q9Y3T6 RNU6-537P-201ENST00000517277 103 ntBASIC1.23□□□□□ -2.21
R3HCC1Q9Y3T6 AC091304.10-201ENST00000641554 121 ntBASIC1.23□□□□□ -2.21
R3HCC1Q9Y3T6 RNU6-392P-201ENST00000364926 101 ntBASIC1.22□□□□□ -2.21
R3HCC1Q9Y3T6 SNORD38.2-201ENST00000384470 69 ntBASIC1.22□□□□□ -2.21
R3HCC1Q9Y3T6 MIR548G-201ENST00000408442 89 ntBASIC1.22□□□□□ -2.21
R3HCC1Q9Y3T6 SNRPGP12-201ENST00000449481 213 ntBASIC1.22□□□□□ -2.21
R3HCC1Q9Y3T6 MTND5P40-201ENST00000559945 246 ntBASIC1.22□□□□□ -2.21
R3HCC1Q9Y3T6 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.22□□□□□ -2.21
R3HCC1Q9Y3T6 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.22□□□□□ -2.21
R3HCC1Q9Y3T6 RNU6-766P-201ENST00000362478 107 ntBASIC1.21□□□□□ -2.22
R3HCC1Q9Y3T6 RNU4-36P-201ENST00000364294 144 ntBASIC1.21□□□□□ -2.22
R3HCC1Q9Y3T6 RNU6-147P-201ENST00000383983 107 ntBASIC1.21□□□□□ -2.22
R3HCC1Q9Y3T6 Y_RNA.536-201ENST00000384621 113 ntBASIC1.21□□□□□ -2.22
R3HCC1Q9Y3T6 RNU6-291P-201ENST00000384720 107 ntBASIC1.21□□□□□ -2.22
R3HCC1Q9Y3T6 SNORD100-201ENST00000408573 76 ntBASIC1.21□□□□□ -2.22
R3HCC1Q9Y3T6 SPINT5P-201ENST00000448174 155 ntBASIC1.21□□□□□ -2.22
R3HCC1Q9Y3T6 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.21□□□□□ -2.22
R3HCC1Q9Y3T6 Y_RNA.659-201ENST00000515994 113 ntBASIC1.21□□□□□ -2.22
R3HCC1Q9Y3T6 AP003327.1-201ENST00000529684 127 ntBASIC1.21□□□□□ -2.22
R3HCC1Q9Y3T6 MIR4661-201ENST00000582720 75 ntBASIC1.21□□□□□ -2.22
R3HCC1Q9Y3T6 AC096720.1-201ENST00000604441 183 ntBASIC1.21□□□□□ -2.22
R3HCC1Q9Y3T6 RNU6-90P-201ENST00000606352 106 ntBASIC1.21□□□□□ -2.22
R3HCC1Q9Y3T6 AC103810.9-201ENST00000606688 112 ntBASIC1.21□□□□□ -2.22
R3HCC1Q9Y3T6 MIR101-2-201ENST00000362195 79 ntBASIC1.2□□□□□ -2.22
R3HCC1Q9Y3T6 Y_RNA.601-201ENST00000410500 113 ntBASIC1.2□□□□□ -2.22
R3HCC1Q9Y3T6 RNU6-109P-201ENST00000516364 107 ntBASIC1.2□□□□□ -2.22
R3HCC1Q9Y3T6 RNU6-184P-201ENST00000516514 107 ntBASIC1.2□□□□□ -2.22
R3HCC1Q9Y3T6 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
R3HCC1Q9Y3T6 RNU6-1163P-201ENST00000364516 107 ntBASIC1.19□□□□□ -2.22
R3HCC1Q9Y3T6 RNU6-1187P-201ENST00000364771 110 ntBASIC1.19□□□□□ -2.22
R3HCC1Q9Y3T6 RNU6-535P-201ENST00000384722 107 ntBASIC1.19□□□□□ -2.22
R3HCC1Q9Y3T6 MIR573-201ENST00000384964 99 ntBASIC1.19□□□□□ -2.22
R3HCC1Q9Y3T6 AC002350.1-201ENST00000490759 375 ntBASIC1.19□□□□□ -2.22
R3HCC1Q9Y3T6 RNU6-850P-201ENST00000516934 103 ntBASIC1.19□□□□□ -2.22
R3HCC1Q9Y3T6 MIR548Z-201ENST00000584743 97 ntBASIC1.19□□□□□ -2.22
R3HCC1Q9Y3T6 Y_RNA.173-201ENST00000363776 113 ntBASIC1.18□□□□□ -2.22
R3HCC1Q9Y3T6 Y_RNA.226-201ENST00000364337 114 ntBASIC1.18□□□□□ -2.22
R3HCC1Q9Y3T6 RNU6-153P-201ENST00000364422 104 ntBASIC1.18□□□□□ -2.22
R3HCC1Q9Y3T6 AC244098.3-201ENST00000424803 96 ntBASIC1.18□□□□□ -2.22
R3HCC1Q9Y3T6 AC109327.2-201ENST00000448339 378 ntBASIC1.18□□□□□ -2.22
R3HCC1Q9Y3T6 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.18□□□□□ -2.22
R3HCC1Q9Y3T6 RNU6-795P-201ENST00000516323 103 ntBASIC1.18□□□□□ -2.22
R3HCC1Q9Y3T6 AC011195.1-201ENST00000578177 177 ntBASIC1.18□□□□□ -2.22
R3HCC1Q9Y3T6 AL353765.1-201ENST00000605514 183 ntBASIC1.18□□□□□ -2.22
R3HCC1Q9Y3T6 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.18□□□□□ -2.22
R3HCC1Q9Y3T6 AC012531.4-201ENST00000616509 177 ntBASIC1.18□□□□□ -2.22
R3HCC1Q9Y3T6 Y_RNA.10-201ENST00000362371 110 ntBASIC1.17□□□□□ -2.22
R3HCC1Q9Y3T6 Y_RNA.56-201ENST00000362798 112 ntBASIC1.17□□□□□ -2.22
R3HCC1Q9Y3T6 RNA5SP245-201ENST00000364239 121 ntBASIC1.17□□□□□ -2.22
R3HCC1Q9Y3T6 RNU6-571P-201ENST00000384128 107 ntBASIC1.17□□□□□ -2.22
R3HCC1Q9Y3T6 RNU6-1113P-201ENST00000384348 107 ntBASIC1.17□□□□□ -2.22
R3HCC1Q9Y3T6 SCARNA23-201ENST00000516060 130 ntBASIC1.17□□□□□ -2.22
R3HCC1Q9Y3T6 uc_338.16-201ENST00000621804 95 ntBASIC1.17□□□□□ -2.22
R3HCC1Q9Y3T6 Y_RNA.32-201ENST00000362589 110 ntBASIC1.16□□□□□ -2.22
R3HCC1Q9Y3T6 RNU6-170P-201ENST00000362832 104 ntBASIC1.16□□□□□ -2.22
R3HCC1Q9Y3T6 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
R3HCC1Q9Y3T6 TRAJ51-201ENST00000504127 63 ntBASIC1.16□□□□□ -2.22
R3HCC1Q9Y3T6 SNORA31.14-201ENST00000516728 116 ntBASIC1.16□□□□□ -2.22
R3HCC1Q9Y3T6 Y_RNA.95-201ENST00000363079 95 ntBASIC1.15□□□□□ -2.23
R3HCC1Q9Y3T6 SNORD45B-201ENST00000364617 72 ntBASIC1.15□□□□□ -2.23
R3HCC1Q9Y3T6 Y_RNA.567-201ENST00000384736 106 ntBASIC1.15□□□□□ -2.23
R3HCC1Q9Y3T6 ACA64.5-201ENST00000516207 127 ntBASIC1.15□□□□□ -2.23
R3HCC1Q9Y3T6 MIR3612-201ENST00000579753 87 ntBASIC1.15□□□□□ -2.23
R3HCC1Q9Y3T6 MIR4777-201ENST00000583710 86 ntBASIC1.15□□□□□ -2.23
R3HCC1Q9Y3T6 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.15□□□□□ -2.23
R3HCC1Q9Y3T6 Y_RNA.467-201ENST00000384297 102 ntBASIC1.14□□□□□ -2.23
R3HCC1Q9Y3T6 AC092628.1-201ENST00000436250 252 ntBASIC1.14□□□□□ -2.23
R3HCC1Q9Y3T6 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.14□□□□□ -2.23
R3HCC1Q9Y3T6 MIR548H5-201ENST00000580314 60 ntBASIC1.14□□□□□ -2.23
R3HCC1Q9Y3T6 RNU6-86P-201ENST00000606534 107 ntBASIC1.14□□□□□ -2.23
R3HCC1Q9Y3T6 MIR8070-201ENST00000616510 88 ntBASIC1.14□□□□□ -2.23
R3HCC1Q9Y3T6 MIR608-201ENST00000384820 100 ntBASIC1.13□□□□□ -2.23
R3HCC1Q9Y3T6 MIR635-201ENST00000384830 98 ntBASIC1.13□□□□□ -2.23
R3HCC1Q9Y3T6 MIR1287-201ENST00000408492 90 ntBASIC1.13□□□□□ -2.23
R3HCC1Q9Y3T6 SNORD63B-201ENST00000411005 70 ntBASIC1.12□□□□□ -2.23
R3HCC1Q9Y3T6 RNU7-106P-201ENST00000459514 67 ntBASIC1.12□□□□□ -2.23
R3HCC1Q9Y3T6 RPL39P28-201ENST00000465655 155 ntBASIC1.12□□□□□ -2.23
R3HCC1Q9Y3T6 SNORD114-21-201ENST00000606412 72 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms