Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 RNY3P2-201ENST00000362918 102 ntBASIC1.09□□□□□ -2.23
SSX2IPQ9Y2D8 Y_RNA.78-201ENST00000362970 110 ntBASIC1.09□□□□□ -2.23
SSX2IPQ9Y2D8 RNU6-403P-201ENST00000363163 104 ntBASIC1.09□□□□□ -2.23
SSX2IPQ9Y2D8 RNA5SP133-201ENST00000363368 119 ntBASIC1.09□□□□□ -2.23
SSX2IPQ9Y2D8 RNU6-1187P-201ENST00000364771 110 ntBASIC1.09□□□□□ -2.23
SSX2IPQ9Y2D8 SNORD38.2-201ENST00000384470 69 ntBASIC1.09□□□□□ -2.23
SSX2IPQ9Y2D8 Y_RNA.588-201ENST00000391254 102 ntBASIC1.09□□□□□ -2.23
SSX2IPQ9Y2D8 MIR938-201ENST00000401216 83 ntBASIC1.09□□□□□ -2.23
SSX2IPQ9Y2D8 U7.7-201ENST00000459276 60 ntBASIC1.09□□□□□ -2.23
SSX2IPQ9Y2D8 PDCD5P2-201ENST00000507570 312 ntBASIC1.09□□□□□ -2.23
SSX2IPQ9Y2D8 RNA5SP436-201ENST00000516020 115 ntBASIC1.09□□□□□ -2.23
SSX2IPQ9Y2D8 SNORD114-21-201ENST00000606412 72 ntBASIC1.09□□□□□ -2.23
SSX2IPQ9Y2D8 MIR376B-201ENST00000614515 100 ntBASIC1.09□□□□□ -2.23
SSX2IPQ9Y2D8 U6.109-201ENST00000636749 87 ntBASIC1.09□□□□□ -2.23
SSX2IPQ9Y2D8 RNU6-369P-201ENST00000362515 102 ntBASIC1.08□□□□□ -2.24
SSX2IPQ9Y2D8 RNU4-36P-201ENST00000364294 144 ntBASIC1.08□□□□□ -2.24
SSX2IPQ9Y2D8 SNORD114-24-201ENST00000365029 72 ntBASIC1.08□□□□□ -2.24
SSX2IPQ9Y2D8 Y_RNA.377-201ENST00000365644 108 ntBASIC1.08□□□□□ -2.24
SSX2IPQ9Y2D8 RNU6-1201P-201ENST00000384227 107 ntBASIC1.08□□□□□ -2.24
SSX2IPQ9Y2D8 RNU6-364P-201ENST00000384387 107 ntBASIC1.08□□□□□ -2.24
SSX2IPQ9Y2D8 MIR34C-201ENST00000384831 77 ntBASIC1.08□□□□□ -2.24
SSX2IPQ9Y2D8 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
SSX2IPQ9Y2D8 MIR942-201ENST00000401111 86 ntBASIC1.08□□□□□ -2.24
SSX2IPQ9Y2D8 RNU6-554P-201ENST00000410466 106 ntBASIC1.08□□□□□ -2.24
SSX2IPQ9Y2D8 AC015818.7-201ENST00000428754 109 ntBASIC1.08□□□□□ -2.24
SSX2IPQ9Y2D8 AL353813.1-201ENST00000440700 253 ntBASIC1.08□□□□□ -2.24
SSX2IPQ9Y2D8 AC087499.7-201ENST00000441958 109 ntBASIC1.08□□□□□ -2.24
SSX2IPQ9Y2D8 AL031737.1-201ENST00000450125 223 ntBASIC1.08□□□□□ -2.24
SSX2IPQ9Y2D8 RNU6-1110P-201ENST00000516462 101 ntBASIC1.08□□□□□ -2.24
SSX2IPQ9Y2D8 RNU7-156P-201ENST00000517214 74 ntBASIC1.08□□□□□ -2.24
SSX2IPQ9Y2D8 DEFB131E-201ENST00000532329 154 ntBASIC1.08□□□□□ -2.24
SSX2IPQ9Y2D8 MIR4804-201ENST00000581683 73 ntBASIC1.08□□□□□ -2.24
SSX2IPQ9Y2D8 AC211469.2-201ENST00000605461 205 ntBASIC1.08□□□□□ -2.24
SSX2IPQ9Y2D8 uc_338.28-201ENST00000612082 187 ntBASIC1.08□□□□□ -2.24
SSX2IPQ9Y2D8 AL442128.1-201ENST00000615151 90 ntBASIC1.08□□□□□ -2.24
SSX2IPQ9Y2D8 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
SSX2IPQ9Y2D8 Y_RNA.10-201ENST00000362371 110 ntBASIC1.07□□□□□ -2.24
SSX2IPQ9Y2D8 RNU4-58P-201ENST00000363192 141 ntBASIC1.07□□□□□ -2.24
SSX2IPQ9Y2D8 Y_RNA.119-201ENST00000363301 96 ntBASIC1.07□□□□□ -2.24
SSX2IPQ9Y2D8 RNU6-832P-201ENST00000363319 107 ntBASIC1.07□□□□□ -2.24
SSX2IPQ9Y2D8 RNU6-1099P-201ENST00000363533 107 ntBASIC1.07□□□□□ -2.24
SSX2IPQ9Y2D8 MIR532-201ENST00000385025 91 ntBASIC1.07□□□□□ -2.24
SSX2IPQ9Y2D8 MIR577-201ENST00000385196 96 ntBASIC1.07□□□□□ -2.24
SSX2IPQ9Y2D8 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.07□□□□□ -2.24
SSX2IPQ9Y2D8 SNORD124-201ENST00000459577 104 ntBASIC1.07□□□□□ -2.24
SSX2IPQ9Y2D8 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.07□□□□□ -2.24
SSX2IPQ9Y2D8 UBL5P1-201ENST00000507979 193 ntBASIC1.07□□□□□ -2.24
SSX2IPQ9Y2D8 AC141557.1-201ENST00000540982 400 ntBASIC1.07□□□□□ -2.24
SSX2IPQ9Y2D8 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.07□□□□□ -2.24
SSX2IPQ9Y2D8 AC096720.1-201ENST00000604441 183 ntBASIC1.07□□□□□ -2.24
SSX2IPQ9Y2D8 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
SSX2IPQ9Y2D8 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.07□□□□□ -2.24
SSX2IPQ9Y2D8 SNORA63.4-201ENST00000362763 126 ntBASIC1.06□□□□□ -2.24
SSX2IPQ9Y2D8 SNORD38.1-201ENST00000363863 68 ntBASIC1.06□□□□□ -2.24
SSX2IPQ9Y2D8 RNU4-38P-201ENST00000364472 129 ntBASIC1.06□□□□□ -2.24
SSX2IPQ9Y2D8 SNORA72.6-201ENST00000384520 129 ntBASIC1.06□□□□□ -2.24
SSX2IPQ9Y2D8 SNORD89-201ENST00000390981 114 ntBASIC1.06□□□□□ -2.24
SSX2IPQ9Y2D8 RNU6-1194P-201ENST00000516208 104 ntBASIC1.06□□□□□ -2.24
SSX2IPQ9Y2D8 SNORD92-201ENST00000585078 85 ntBASIC1.06□□□□□ -2.24
SSX2IPQ9Y2D8 MIR6082-201ENST00000613604 109 ntBASIC1.06□□□□□ -2.24
SSX2IPQ9Y2D8 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
SSX2IPQ9Y2D8 SNORA51.5-201ENST00000384126 131 ntBASIC1.05□□□□□ -2.24
SSX2IPQ9Y2D8 RNU1-119P-201ENST00000391122 165 ntBASIC1.05□□□□□ -2.24
SSX2IPQ9Y2D8 RNU7-56P-201ENST00000458744 62 ntBASIC1.05□□□□□ -2.24
SSX2IPQ9Y2D8 RPL39P28-201ENST00000465655 155 ntBASIC1.05□□□□□ -2.24
SSX2IPQ9Y2D8 SNORA25.16-201ENST00000516741 121 ntBASIC1.05□□□□□ -2.24
SSX2IPQ9Y2D8 RNU6-765P-201ENST00000516916 99 ntBASIC1.05□□□□□ -2.24
SSX2IPQ9Y2D8 MIR4500-201ENST00000579472 76 ntBASIC1.05□□□□□ -2.24
SSX2IPQ9Y2D8 Y_RNA.13-201ENST00000362403 112 ntBASIC1.04□□□□□ -2.24
SSX2IPQ9Y2D8 RNU6-756P-201ENST00000383997 107 ntBASIC1.04□□□□□ -2.24
SSX2IPQ9Y2D8 MIR520F-201ENST00000384824 87 ntBASIC1.04□□□□□ -2.24
SSX2IPQ9Y2D8 RNU6-1006P-201ENST00000516998 103 ntBASIC1.04□□□□□ -2.24
SSX2IPQ9Y2D8 AC025627.3-201ENST00000582078 182 ntBASIC1.04□□□□□ -2.24
SSX2IPQ9Y2D8 RN7SL793P-201ENST00000583259 296 ntBASIC1.04□□□□□ -2.24
SSX2IPQ9Y2D8 HSBP1P2-201ENST00000299671 229 ntBASIC1.03□□□□□ -2.24
SSX2IPQ9Y2D8 RNU6-766P-201ENST00000362478 107 ntBASIC1.03□□□□□ -2.24
SSX2IPQ9Y2D8 RNY1P4-201ENST00000384595 115 ntBASIC1.03□□□□□ -2.24
SSX2IPQ9Y2D8 Y_RNA.601-201ENST00000410500 113 ntBASIC1.03□□□□□ -2.24
SSX2IPQ9Y2D8 AC004941.2-201ENST00000427009 228 ntBASIC1.03□□□□□ -2.24
SSX2IPQ9Y2D8 RNU7-102P-201ENST00000458948 62 ntBASIC1.03□□□□□ -2.24
SSX2IPQ9Y2D8 RNU6-904P-201ENST00000516206 101 ntBASIC1.03□□□□□ -2.24
SSX2IPQ9Y2D8 RNU6-531P-201ENST00000516694 104 ntBASIC1.03□□□□□ -2.24
SSX2IPQ9Y2D8 MIR8066-201ENST00000617280 78 ntBASIC1.03□□□□□ -2.24
SSX2IPQ9Y2D8 Y_RNA.42-201ENST00000362660 108 ntBASIC1.02□□□□□ -2.25
SSX2IPQ9Y2D8 MTND5P40-201ENST00000559945 246 ntBASIC1.02□□□□□ -2.25
SSX2IPQ9Y2D8 MIR5000-201ENST00000577717 103 ntBASIC1.02□□□□□ -2.25
SSX2IPQ9Y2D8 AC090897.1-201ENST00000580909 226 ntBASIC1.02□□□□□ -2.25
SSX2IPQ9Y2D8 RNU6-90P-201ENST00000606352 106 ntBASIC1.02□□□□□ -2.25
SSX2IPQ9Y2D8 MIR373-201ENST00000362273 69 ntBASIC1.01□□□□□ -2.25
SSX2IPQ9Y2D8 SNORD45B-201ENST00000364617 72 ntBASIC1.01□□□□□ -2.25
SSX2IPQ9Y2D8 MIR216A-201ENST00000385063 110 ntBASIC1.01□□□□□ -2.25
SSX2IPQ9Y2D8 SNORD105-201ENST00000386910 85 ntBASIC1.01□□□□□ -2.25
SSX2IPQ9Y2D8 MIR548G-201ENST00000408442 89 ntBASIC1.01□□□□□ -2.25
SSX2IPQ9Y2D8 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.01□□□□□ -2.25
SSX2IPQ9Y2D8 MIR101-2-201ENST00000362195 79 ntBASIC1□□□□□ -2.25
SSX2IPQ9Y2D8 SPINT5P-201ENST00000448174 155 ntBASIC1□□□□□ -2.25
SSX2IPQ9Y2D8 Y_RNA.659-201ENST00000515994 113 ntBASIC1□□□□□ -2.25
SSX2IPQ9Y2D8 RNA5SP255-201ENST00000516370 107 ntBASIC1□□□□□ -2.25
SSX2IPQ9Y2D8 AP003327.1-201ENST00000529684 127 ntBASIC1□□□□□ -2.25
SSX2IPQ9Y2D8 AC013244.2-201ENST00000603396 103 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 177.4 ms