Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC008834.1-201ENST00000511612 175 ntBASIC2.42□□□□□ -2.02
ZC3H4Q9UPT8 SNORA25.15-201ENST00000516487 89 ntBASIC2.42□□□□□ -2.02
ZC3H4Q9UPT8 MIR4536-1-201ENST00000583537 88 ntBASIC2.42□□□□□ -2.02
ZC3H4Q9UPT8 RNA5SP264-201ENST00000363115 107 ntBASIC2.41□□□□□ -2.02
ZC3H4Q9UPT8 RNU4-58P-201ENST00000363192 141 ntBASIC2.41□□□□□ -2.02
ZC3H4Q9UPT8 RNU6-1254P-201ENST00000391266 104 ntBASIC2.41□□□□□ -2.02
ZC3H4Q9UPT8 AL450471.1-201ENST00000447509 127 ntBASIC2.41□□□□□ -2.02
ZC3H4Q9UPT8 MIR4796-201ENST00000580742 81 ntBASIC2.41□□□□□ -2.02
ZC3H4Q9UPT8 MIR4491-201ENST00000581087 68 ntBASIC2.41□□□□□ -2.02
ZC3H4Q9UPT8 Y_RNA.783-201ENST00000613546 102 ntBASIC2.41□□□□□ -2.02
ZC3H4Q9UPT8 RNU6-811P-201ENST00000384069 107 ntBASIC2.4□□□□□ -2.03
ZC3H4Q9UPT8 AC005908.1-201ENST00000468701 347 ntBASIC2.4□□□□□ -2.03
ZC3H4Q9UPT8 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
ZC3H4Q9UPT8 Y_RNA.224-201ENST00000364308 111 ntBASIC2.39□□□□□ -2.03
ZC3H4Q9UPT8 RNU6-466P-201ENST00000391224 103 ntBASIC2.39□□□□□ -2.03
ZC3H4Q9UPT8 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.39□□□□□ -2.03
ZC3H4Q9UPT8 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.39□□□□□ -2.03
ZC3H4Q9UPT8 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.39□□□□□ -2.03
ZC3H4Q9UPT8 MIR3937-201ENST00000580135 106 ntBASIC2.39□□□□□ -2.03
ZC3H4Q9UPT8 AC103810.8-201ENST00000607347 118 ntBASIC2.39□□□□□ -2.03
ZC3H4Q9UPT8 MIR377-201ENST00000362145 69 ntBASIC2.38□□□□□ -2.03
ZC3H4Q9UPT8 RNU6-717P-201ENST00000459076 104 ntBASIC2.38□□□□□ -2.03
ZC3H4Q9UPT8 RNU11-2P-201ENST00000516898 142 ntBASIC2.38□□□□□ -2.03
ZC3H4Q9UPT8 AC008163.1-202ENST00000636004 2889 ntBASIC2.37□□□□□ -2.03
ZC3H4Q9UPT8 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
ZC3H4Q9UPT8 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
ZC3H4Q9UPT8 MIR101-2-201ENST00000362195 79 ntBASIC2.37□□□□□ -2.03
ZC3H4Q9UPT8 RNU6-315P-201ENST00000362666 107 ntBASIC2.37□□□□□ -2.03
ZC3H4Q9UPT8 Y_RNA.565-201ENST00000384719 101 ntBASIC2.37□□□□□ -2.03
ZC3H4Q9UPT8 MIR1276-201ENST00000408707 83 ntBASIC2.37□□□□□ -2.03
ZC3H4Q9UPT8 AC145423.2-201ENST00000610631 239 ntBASIC2.37□□□□□ -2.03
ZC3H4Q9UPT8 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
ZC3H4Q9UPT8 AC023934.1-201ENST00000574529 2389 ntBASIC2.37□□□□□ -2.03
ZC3H4Q9UPT8 SNORD36A-201ENST00000362874 73 ntBASIC2.36□□□□□ -2.03
ZC3H4Q9UPT8 RNU6-478P-201ENST00000363904 110 ntBASIC2.36□□□□□ -2.03
ZC3H4Q9UPT8 RNU6-392P-201ENST00000364926 101 ntBASIC2.36□□□□□ -2.03
ZC3H4Q9UPT8 RNU1-36P-201ENST00000365130 165 ntBASIC2.36□□□□□ -2.03
ZC3H4Q9UPT8 MIR934-201ENST00000401241 83 ntBASIC2.36□□□□□ -2.03
ZC3H4Q9UPT8 MIR4448-201ENST00000584360 86 ntBASIC2.36□□□□□ -2.03
ZC3H4Q9UPT8 RNU6-1094P-201ENST00000362416 104 ntBASIC2.35□□□□□ -2.03
ZC3H4Q9UPT8 Y_RNA.283-201ENST00000364798 112 ntBASIC2.35□□□□□ -2.03
ZC3H4Q9UPT8 RNU6-1065P-201ENST00000384513 106 ntBASIC2.35□□□□□ -2.03
ZC3H4Q9UPT8 RNA5SP292-201ENST00000390974 118 ntBASIC2.35□□□□□ -2.03
ZC3H4Q9UPT8 AC079140.2-201ENST00000506193 142 ntBASIC2.35□□□□□ -2.03
ZC3H4Q9UPT8 AP003716.2-201ENST00000528260 108 ntBASIC2.35□□□□□ -2.03
ZC3H4Q9UPT8 MIR6504-201ENST00000613520 61 ntBASIC2.35□□□□□ -2.03
ZC3H4Q9UPT8 AC084768.2-201ENST00000622736 221 ntBASIC2.35□□□□□ -2.03
ZC3H4Q9UPT8 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
ZC3H4Q9UPT8 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
ZC3H4Q9UPT8 Y_RNA.330-201ENST00000365230 109 ntBASIC2.34□□□□□ -2.04
ZC3H4Q9UPT8 Y_RNA.588-201ENST00000391254 102 ntBASIC2.34□□□□□ -2.04
ZC3H4Q9UPT8 SNORD63B-201ENST00000411005 70 ntBASIC2.34□□□□□ -2.04
ZC3H4Q9UPT8 MIR18B-201ENST00000454574 71 ntBASIC2.34□□□□□ -2.04
ZC3H4Q9UPT8 U7.4-201ENST00000614961 63 ntBASIC2.34□□□□□ -2.04
ZC3H4Q9UPT8 SNORD33-201ENST00000362761 85 ntBASIC2.33□□□□□ -2.04
ZC3H4Q9UPT8 RNU6-161P-201ENST00000363051 106 ntBASIC2.33□□□□□ -2.04
ZC3H4Q9UPT8 RNA5SP37-201ENST00000365420 130 ntBASIC2.33□□□□□ -2.04
ZC3H4Q9UPT8 MIR9-3-201ENST00000385084 90 ntBASIC2.33□□□□□ -2.04
ZC3H4Q9UPT8 MIR1257-201ENST00000408490 117 ntBASIC2.33□□□□□ -2.04
ZC3H4Q9UPT8 RNU7-106P-201ENST00000459514 67 ntBASIC2.33□□□□□ -2.04
ZC3H4Q9UPT8 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.32□□□□□ -2.04
ZC3H4Q9UPT8 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
ZC3H4Q9UPT8 MIRLET7G-201ENST00000362280 84 ntBASIC2.32□□□□□ -2.04
ZC3H4Q9UPT8 RNU6-1229P-201ENST00000364295 107 ntBASIC2.32□□□□□ -2.04
ZC3H4Q9UPT8 RNU6-380P-201ENST00000410207 107 ntBASIC2.32□□□□□ -2.04
ZC3H4Q9UPT8 RNU6-1108P-201ENST00000516308 104 ntBASIC2.32□□□□□ -2.04
ZC3H4Q9UPT8 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
ZC3H4Q9UPT8 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
ZC3H4Q9UPT8 SNORD1A-201ENST00000364968 72 ntBASIC2.31□□□□□ -2.04
ZC3H4Q9UPT8 MIR548U-201ENST00000390728 81 ntBASIC2.31□□□□□ -2.04
ZC3H4Q9UPT8 SNORD83.1-201ENST00000411362 77 ntBASIC2.31□□□□□ -2.04
ZC3H4Q9UPT8 snoU13.21-201ENST00000459368 105 ntBASIC2.31□□□□□ -2.04
ZC3H4Q9UPT8 SNORA18.5-201ENST00000516616 101 ntBASIC2.31□□□□□ -2.04
ZC3H4Q9UPT8 AC104996.3-201ENST00000590718 94 ntBASIC2.31□□□□□ -2.04
ZC3H4Q9UPT8 AC013244.2-201ENST00000603396 103 ntBASIC2.31□□□□□ -2.04
ZC3H4Q9UPT8 BX248123.2-201ENST00000606318 124 ntBASIC2.31□□□□□ -2.04
ZC3H4Q9UPT8 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.31□□□□□ -2.04
ZC3H4Q9UPT8 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.3□□□□□ -2.04
ZC3H4Q9UPT8 MIRLET7F1-201ENST00000362202 87 ntBASIC2.3□□□□□ -2.04
ZC3H4Q9UPT8 RNU6-957P-201ENST00000363652 99 ntBASIC2.3□□□□□ -2.04
ZC3H4Q9UPT8 RNA5SP160-201ENST00000364866 120 ntBASIC2.3□□□□□ -2.04
ZC3H4Q9UPT8 RNU6-132P-201ENST00000383863 107 ntBASIC2.3□□□□□ -2.04
ZC3H4Q9UPT8 MIR635-201ENST00000384830 98 ntBASIC2.3□□□□□ -2.04
ZC3H4Q9UPT8 SNORD100-201ENST00000408573 76 ntBASIC2.3□□□□□ -2.04
ZC3H4Q9UPT8 RNU7-185P-201ENST00000459215 60 ntBASIC2.3□□□□□ -2.04
ZC3H4Q9UPT8 RNU7-95P-201ENST00000459222 64 ntBASIC2.3□□□□□ -2.04
ZC3H4Q9UPT8 MIR3064-201ENST00000581130 66 ntBASIC2.3□□□□□ -2.04
ZC3H4Q9UPT8 MIR4303-201ENST00000581299 66 ntBASIC2.3□□□□□ -2.04
ZC3H4Q9UPT8 MIR4422-201ENST00000581938 83 ntBASIC2.3□□□□□ -2.04
ZC3H4Q9UPT8 SNORD92-201ENST00000585078 85 ntBASIC2.3□□□□□ -2.04
ZC3H4Q9UPT8 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.3□□□□□ -2.04
ZC3H4Q9UPT8 RNU6-624P-201ENST00000363411 107 ntBASIC2.29□□□□□ -2.04
ZC3H4Q9UPT8 RNU4-52P-201ENST00000384209 138 ntBASIC2.29□□□□□ -2.04
ZC3H4Q9UPT8 AC015818.7-201ENST00000428754 109 ntBASIC2.29□□□□□ -2.04
ZC3H4Q9UPT8 RNU6-1194P-201ENST00000516208 104 ntBASIC2.29□□□□□ -2.04
ZC3H4Q9UPT8 MIR5089-201ENST00000580047 84 ntBASIC2.29□□□□□ -2.04
ZC3H4Q9UPT8 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
ZC3H4Q9UPT8 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
ZC3H4Q9UPT8 SNORA63.2-201ENST00000362603 126 ntBASIC2.28□□□□□ -2.04
ZC3H4Q9UPT8 Y_RNA.491-201ENST00000384417 107 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms