Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 Y_RNA.258-201ENST00000364613 105 ntBASIC2.85□□□□□ -1.95
PDZRN3Q9UPQ7 RNU6-382P-201ENST00000365181 106 ntBASIC2.85□□□□□ -1.95
PDZRN3Q9UPQ7 Y_RNA.379-201ENST00000365653 102 ntBASIC2.85□□□□□ -1.95
PDZRN3Q9UPQ7 AC244098.3-201ENST00000424803 96 ntBASIC2.85□□□□□ -1.95
PDZRN3Q9UPQ7 MTND4LP1-201ENST00000446263 157 ntBASIC2.85□□□□□ -1.95
PDZRN3Q9UPQ7 SNORA31.11-201ENST00000516528 139 ntBASIC2.85□□□□□ -1.95
PDZRN3Q9UPQ7 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.85□□□□□ -1.95
PDZRN3Q9UPQ7 Z82195.2-201ENST00000612348 18351 ntBASIC2.84□□□□□ -1.95
PDZRN3Q9UPQ7 SNORA6-201ENST00000384033 151 ntBASIC2.84□□□□□ -1.95
PDZRN3Q9UPQ7 MIR519A1-201ENST00000385257 85 ntBASIC2.84□□□□□ -1.95
PDZRN3Q9UPQ7 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
PDZRN3Q9UPQ7 AC009474.2-201ENST00000451383 136 ntBASIC2.84□□□□□ -1.95
PDZRN3Q9UPQ7 RNU6-122P-201ENST00000516818 107 ntBASIC2.84□□□□□ -1.95
PDZRN3Q9UPQ7 PRELID3BP2-201ENST00000605362 201 ntBASIC2.84□□□□□ -1.95
PDZRN3Q9UPQ7 MIR6740-201ENST00000618268 113 ntBASIC2.84□□□□□ -1.95
PDZRN3Q9UPQ7 RNU1-58P-201ENST00000362413 163 ntBASIC2.83□□□□□ -1.96
PDZRN3Q9UPQ7 SNORA26.9-201ENST00000391322 122 ntBASIC2.83□□□□□ -1.96
PDZRN3Q9UPQ7 RNU6-274P-201ENST00000459566 107 ntBASIC2.83□□□□□ -1.96
PDZRN3Q9UPQ7 AC104435.1-201ENST00000483483 166 ntBASIC2.83□□□□□ -1.96
PDZRN3Q9UPQ7 RNU7-41P-201ENST00000515917 61 ntBASIC2.83□□□□□ -1.96
PDZRN3Q9UPQ7 SNORA25.16-201ENST00000516741 121 ntBASIC2.83□□□□□ -1.96
PDZRN3Q9UPQ7 SUB1P4-201ENST00000566062 339 ntBASIC2.83□□□□□ -1.96
PDZRN3Q9UPQ7 RNU6-1260P-201ENST00000362944 107 ntBASIC2.82□□□□□ -1.96
PDZRN3Q9UPQ7 RNU6-1177P-201ENST00000391058 104 ntBASIC2.82□□□□□ -1.96
PDZRN3Q9UPQ7 SNORD100-201ENST00000408573 76 ntBASIC2.82□□□□□ -1.96
PDZRN3Q9UPQ7 RNA5SP200-201ENST00000516360 103 ntBASIC2.82□□□□□ -1.96
PDZRN3Q9UPQ7 RNA5SP437-201ENST00000517249 129 ntBASIC2.82□□□□□ -1.96
PDZRN3Q9UPQ7 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
PDZRN3Q9UPQ7 RNU6-1312P-201ENST00000362425 108 ntBASIC2.81□□□□□ -1.96
PDZRN3Q9UPQ7 RNU4-58P-201ENST00000363192 141 ntBASIC2.81□□□□□ -1.96
PDZRN3Q9UPQ7 RNU6-753P-201ENST00000363926 107 ntBASIC2.81□□□□□ -1.96
PDZRN3Q9UPQ7 Y_RNA.536-201ENST00000384621 113 ntBASIC2.81□□□□□ -1.96
PDZRN3Q9UPQ7 SNORA64-201ENST00000384674 134 ntBASIC2.81□□□□□ -1.96
PDZRN3Q9UPQ7 RNU6-935P-201ENST00000410371 100 ntBASIC2.81□□□□□ -1.96
PDZRN3Q9UPQ7 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
PDZRN3Q9UPQ7 MIR424-201ENST00000362227 98 ntBASIC2.8□□□□□ -1.96
PDZRN3Q9UPQ7 MIR451A-201ENST00000385059 72 ntBASIC2.8□□□□□ -1.96
PDZRN3Q9UPQ7 Y_RNA.809-201ENST00000516058 95 ntBASIC2.8□□□□□ -1.96
PDZRN3Q9UPQ7 MIR4491-201ENST00000581087 68 ntBASIC2.8□□□□□ -1.96
PDZRN3Q9UPQ7 AC106800.4-201ENST00000614905 153 ntBASIC2.8□□□□□ -1.96
PDZRN3Q9UPQ7 DLEU2_4.2-201ENST00000616613 58 ntBASIC2.8□□□□□ -1.96
PDZRN3Q9UPQ7 MIR6132-201ENST00000622083 109 ntBASIC2.8□□□□□ -1.96
PDZRN3Q9UPQ7 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.8□□□□□ -1.96
PDZRN3Q9UPQ7 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
PDZRN3Q9UPQ7 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
PDZRN3Q9UPQ7 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
PDZRN3Q9UPQ7 MIR221-201ENST00000385135 110 ntBASIC2.79□□□□□ -1.96
PDZRN3Q9UPQ7 RNU6-1165P-201ENST00000410119 107 ntBASIC2.79□□□□□ -1.96
PDZRN3Q9UPQ7 MIR4709-201ENST00000577272 72 ntBASIC2.79□□□□□ -1.96
PDZRN3Q9UPQ7 AL078603.1-201ENST00000603824 313 ntBASIC2.79□□□□□ -1.96
PDZRN3Q9UPQ7 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.79□□□□□ -1.96
PDZRN3Q9UPQ7 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.78□□□□□ -1.96
PDZRN3Q9UPQ7 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.78□□□□□ -1.96
PDZRN3Q9UPQ7 Y_RNA.588-201ENST00000391254 102 ntBASIC2.78□□□□□ -1.96
PDZRN3Q9UPQ7 BX510359.4-201ENST00000423750 193 ntBASIC2.78□□□□□ -1.96
PDZRN3Q9UPQ7 RNU6-295P-201ENST00000516901 104 ntBASIC2.78□□□□□ -1.96
PDZRN3Q9UPQ7 MIR5002-201ENST00000584713 97 ntBASIC2.78□□□□□ -1.96
PDZRN3Q9UPQ7 MIR6895-201ENST00000613497 78 ntBASIC2.78□□□□□ -1.96
PDZRN3Q9UPQ7 AC080100.1-201ENST00000624239 5356 ntBASIC2.78□□□□□ -1.96
PDZRN3Q9UPQ7 RNA5SP299-201ENST00000391203 116 ntBASIC2.77□□□□□ -1.97
PDZRN3Q9UPQ7 RNA5SP270-201ENST00000411361 118 ntBASIC2.77□□□□□ -1.97
PDZRN3Q9UPQ7 RNA5SP137-201ENST00000516833 135 ntBASIC2.77□□□□□ -1.97
PDZRN3Q9UPQ7 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.77□□□□□ -1.97
PDZRN3Q9UPQ7 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
PDZRN3Q9UPQ7 SNORA3A-201ENST00000364113 130 ntBASIC2.76□□□□□ -1.97
PDZRN3Q9UPQ7 SNORA48.3-201ENST00000391081 134 ntBASIC2.76□□□□□ -1.97
PDZRN3Q9UPQ7 SNORD23.1-201ENST00000408212 104 ntBASIC2.76□□□□□ -1.97
PDZRN3Q9UPQ7 RNA5SP247-201ENST00000411181 105 ntBASIC2.76□□□□□ -1.97
PDZRN3Q9UPQ7 uc_338.6-201ENST00000613544 171 ntBASIC2.76□□□□□ -1.97
PDZRN3Q9UPQ7 MIRLET7G-201ENST00000362280 84 ntBASIC2.75□□□□□ -1.97
PDZRN3Q9UPQ7 MIR1302-7-201ENST00000408841 72 ntBASIC2.75□□□□□ -1.97
PDZRN3Q9UPQ7 AP000942.3-201ENST00000603702 160 ntBASIC2.75□□□□□ -1.97
PDZRN3Q9UPQ7 AC023934.1-201ENST00000574529 2389 ntBASIC2.75□□□□□ -1.97
PDZRN3Q9UPQ7 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
PDZRN3Q9UPQ7 RNU6-53P-201ENST00000365367 106 ntBASIC2.74□□□□□ -1.97
PDZRN3Q9UPQ7 MIR520A-201ENST00000384862 85 ntBASIC2.74□□□□□ -1.97
PDZRN3Q9UPQ7 MIR597-201ENST00000384968 97 ntBASIC2.74□□□□□ -1.97
PDZRN3Q9UPQ7 SNORA75.1-201ENST00000391130 148 ntBASIC2.74□□□□□ -1.97
PDZRN3Q9UPQ7 RNU6-1054P-201ENST00000411293 104 ntBASIC2.74□□□□□ -1.97
PDZRN3Q9UPQ7 AC022202.1-201ENST00000613515 211 ntBASIC2.74□□□□□ -1.97
PDZRN3Q9UPQ7 AC073869.9-201ENST00000641610 120 ntBASIC2.74□□□□□ -1.97
PDZRN3Q9UPQ7 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
PDZRN3Q9UPQ7 MT-TF-201ENST00000387314 71 ntBASIC2.73□□□□□ -1.97
PDZRN3Q9UPQ7 snoU13.27-201ENST00000459278 104 ntBASIC2.73□□□□□ -1.97
PDZRN3Q9UPQ7 RNVU1-2-201ENST00000516326 135 ntBASIC2.73□□□□□ -1.97
PDZRN3Q9UPQ7 AC026271.5-201ENST00000577873 130 ntBASIC2.73□□□□□ -1.97
PDZRN3Q9UPQ7 MIR548H5-201ENST00000580314 60 ntBASIC2.73□□□□□ -1.97
PDZRN3Q9UPQ7 MIR548AD-201ENST00000584780 82 ntBASIC2.73□□□□□ -1.97
PDZRN3Q9UPQ7 RNU6-92P-201ENST00000605893 104 ntBASIC2.73□□□□□ -1.97
PDZRN3Q9UPQ7 MIR6840-201ENST00000611937 71 ntBASIC2.73□□□□□ -1.97
PDZRN3Q9UPQ7 SNORD60.1-201ENST00000362451 73 ntBASIC2.72□□□□□ -1.97
PDZRN3Q9UPQ7 RNU1-148P-201ENST00000384472 162 ntBASIC2.72□□□□□ -1.97
PDZRN3Q9UPQ7 MIR3126-201ENST00000577443 74 ntBASIC2.72□□□□□ -1.97
PDZRN3Q9UPQ7 MIR5694-201ENST00000581190 76 ntBASIC2.72□□□□□ -1.97
PDZRN3Q9UPQ7 RNU7-10P-201ENST00000607194 63 ntBASIC2.72□□□□□ -1.97
PDZRN3Q9UPQ7 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PDZRN3Q9UPQ7 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.97
PDZRN3Q9UPQ7 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
PDZRN3Q9UPQ7 SNORA25.3-201ENST00000363205 127 ntBASIC2.71□□□□□ -1.98
PDZRN3Q9UPQ7 SNORA67.3-201ENST00000384366 140 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 190.9 ms