Protein–RNA interactions for Protein: Q9UPN6

SCAF8, Protein SCAF8, humanhuman

Known RBP Predictions only

Length 1,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8Q9UPN6 Y_RNA.601-201ENST00000410500 113 ntBASIC1.22□□□□□ -2.21
SCAF8Q9UPN6 SCARNA23-201ENST00000516060 130 ntBASIC1.22□□□□□ -2.21
SCAF8Q9UPN6 MIR376B-201ENST00000614515 100 ntBASIC1.22□□□□□ -2.21
SCAF8Q9UPN6 AL442128.1-201ENST00000615151 90 ntBASIC1.22□□□□□ -2.21
SCAF8Q9UPN6 Y_RNA.10-201ENST00000362371 110 ntBASIC1.21□□□□□ -2.22
SCAF8Q9UPN6 Y_RNA.247-201ENST00000364500 92 ntBASIC1.21□□□□□ -2.22
SCAF8Q9UPN6 RNU6-905P-201ENST00000384434 107 ntBASIC1.21□□□□□ -2.22
SCAF8Q9UPN6 SNORA2B-201ENST00000384583 137 ntBASIC1.21□□□□□ -2.22
SCAF8Q9UPN6 MT-TF-201ENST00000387314 71 ntBASIC1.21□□□□□ -2.22
SCAF8Q9UPN6 U8.15-201ENST00000390947 134 ntBASIC1.21□□□□□ -2.22
SCAF8Q9UPN6 SNORD111-201ENST00000408139 94 ntBASIC1.21□□□□□ -2.22
SCAF8Q9UPN6 RNU7-48P-201ENST00000458875 63 ntBASIC1.21□□□□□ -2.22
SCAF8Q9UPN6 RNU6-1006P-201ENST00000516998 103 ntBASIC1.21□□□□□ -2.22
SCAF8Q9UPN6 AC036111.3-201ENST00000526389 112 ntBASIC1.21□□□□□ -2.22
SCAF8Q9UPN6 AC008163.1-202ENST00000636004 2889 ntBASIC1.2□□□□□ -2.22
SCAF8Q9UPN6 Y_RNA.30-201ENST00000362572 97 ntBASIC1.2□□□□□ -2.22
SCAF8Q9UPN6 Y_RNA.98-201ENST00000363109 102 ntBASIC1.2□□□□□ -2.22
SCAF8Q9UPN6 RNU6-640P-201ENST00000363693 105 ntBASIC1.2□□□□□ -2.22
SCAF8Q9UPN6 AC096949.1-201ENST00000412047 152 ntBASIC1.2□□□□□ -2.22
SCAF8Q9UPN6 OR2A41P-201ENST00000473586 105 ntBASIC1.2□□□□□ -2.22
SCAF8Q9UPN6 SNORA40.13-201ENST00000516379 120 ntBASIC1.2□□□□□ -2.22
SCAF8Q9UPN6 RNA5SP170-201ENST00000517150 101 ntBASIC1.2□□□□□ -2.22
SCAF8Q9UPN6 CYP3A137P-201ENST00000562436 69 ntBASIC1.2□□□□□ -2.22
SCAF8Q9UPN6 AC133485.1-201ENST00000567176 124 ntBASIC1.2□□□□□ -2.22
SCAF8Q9UPN6 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
SCAF8Q9UPN6 Y_RNA.93-201ENST00000363066 109 ntBASIC1.19□□□□□ -2.22
SCAF8Q9UPN6 RNU4-38P-201ENST00000364472 129 ntBASIC1.19□□□□□ -2.22
SCAF8Q9UPN6 SNORD113.3-201ENST00000364630 78 ntBASIC1.19□□□□□ -2.22
SCAF8Q9UPN6 RPS29P28-201ENST00000446439 141 ntBASIC1.19□□□□□ -2.22
SCAF8Q9UPN6 MIR18B-201ENST00000454574 71 ntBASIC1.19□□□□□ -2.22
SCAF8Q9UPN6 snoU13.21-201ENST00000459368 105 ntBASIC1.19□□□□□ -2.22
SCAF8Q9UPN6 RNU6-795P-201ENST00000516323 103 ntBASIC1.19□□□□□ -2.22
SCAF8Q9UPN6 Y_RNA.694-201ENST00000516677 117 ntBASIC1.19□□□□□ -2.22
SCAF8Q9UPN6 RNU6-158P-201ENST00000517104 100 ntBASIC1.19□□□□□ -2.22
SCAF8Q9UPN6 RN7SL793P-201ENST00000583259 296 ntBASIC1.19□□□□□ -2.22
SCAF8Q9UPN6 AC106800.4-201ENST00000614905 153 ntBASIC1.19□□□□□ -2.22
SCAF8Q9UPN6 AC012531.4-201ENST00000616509 177 ntBASIC1.19□□□□□ -2.22
SCAF8Q9UPN6 AC012676.2-201ENST00000619258 186 ntBASIC1.19□□□□□ -2.22
SCAF8Q9UPN6 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.19□□□□□ -2.22
SCAF8Q9UPN6 AC091304.10-201ENST00000641554 121 ntBASIC1.19□□□□□ -2.22
SCAF8Q9UPN6 RNU6-170P-201ENST00000362832 104 ntBASIC1.18□□□□□ -2.22
SCAF8Q9UPN6 Y_RNA.107-201ENST00000363190 121 ntBASIC1.18□□□□□ -2.22
SCAF8Q9UPN6 SNORD114-24-201ENST00000365029 72 ntBASIC1.18□□□□□ -2.22
SCAF8Q9UPN6 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
SCAF8Q9UPN6 MTATP8P2-201ENST00000435212 202 ntBASIC1.18□□□□□ -2.22
SCAF8Q9UPN6 FABP5P4-201ENST00000437203 171 ntBASIC1.18□□□□□ -2.22
SCAF8Q9UPN6 Y_RNA.659-201ENST00000515994 113 ntBASIC1.18□□□□□ -2.22
SCAF8Q9UPN6 AC023827.1-201ENST00000569247 97 ntBASIC1.18□□□□□ -2.22
SCAF8Q9UPN6 MIR548Z-201ENST00000584743 97 ntBASIC1.18□□□□□ -2.22
SCAF8Q9UPN6 AC096720.1-201ENST00000604441 183 ntBASIC1.18□□□□□ -2.22
SCAF8Q9UPN6 AP001362.1-201ENST00000625165 124 ntBASIC1.18□□□□□ -2.22
SCAF8Q9UPN6 SNORD38.1-201ENST00000363863 68 ntBASIC1.17□□□□□ -2.22
SCAF8Q9UPN6 SNORD45B-201ENST00000364617 72 ntBASIC1.17□□□□□ -2.22
SCAF8Q9UPN6 RNY1P2-201ENST00000364820 117 ntBASIC1.17□□□□□ -2.22
SCAF8Q9UPN6 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
SCAF8Q9UPN6 SNORD83.1-201ENST00000411362 77 ntBASIC1.17□□□□□ -2.22
SCAF8Q9UPN6 AC138749.4-201ENST00000563970 127 ntBASIC1.17□□□□□ -2.22
SCAF8Q9UPN6 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.17□□□□□ -2.22
SCAF8Q9UPN6 MIR216A-201ENST00000385063 110 ntBASIC1.16□□□□□ -2.22
SCAF8Q9UPN6 AC004941.2-201ENST00000427009 228 ntBASIC1.16□□□□□ -2.22
SCAF8Q9UPN6 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.16□□□□□ -2.22
SCAF8Q9UPN6 MIR4777-201ENST00000583710 86 ntBASIC1.16□□□□□ -2.22
SCAF8Q9UPN6 U6.109-201ENST00000636749 87 ntBASIC1.16□□□□□ -2.22
SCAF8Q9UPN6 Y_RNA.95-201ENST00000363079 95 ntBASIC1.15□□□□□ -2.23
SCAF8Q9UPN6 RNA5SP133-201ENST00000363368 119 ntBASIC1.15□□□□□ -2.23
SCAF8Q9UPN6 RNU1-36P-201ENST00000365130 165 ntBASIC1.15□□□□□ -2.23
SCAF8Q9UPN6 RNU6-934P-201ENST00000365154 107 ntBASIC1.15□□□□□ -2.23
SCAF8Q9UPN6 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.15□□□□□ -2.23
SCAF8Q9UPN6 SNORD93-201ENST00000408813 74 ntBASIC1.15□□□□□ -2.23
SCAF8Q9UPN6 RNY4P30-201ENST00000410216 95 ntBASIC1.15□□□□□ -2.23
SCAF8Q9UPN6 MIR4714-201ENST00000580728 77 ntBASIC1.15□□□□□ -2.23
SCAF8Q9UPN6 MIR4491-201ENST00000581087 68 ntBASIC1.15□□□□□ -2.23
SCAF8Q9UPN6 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.15□□□□□ -2.23
SCAF8Q9UPN6 MIR2052-201ENST00000636055 55 ntBASIC1.15□□□□□ -2.23
SCAF8Q9UPN6 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
SCAF8Q9UPN6 AC023934.1-201ENST00000574529 2389 ntBASIC1.15□□□□□ -2.23
SCAF8Q9UPN6 Y_RNA.43-201ENST00000362670 111 ntBASIC1.14□□□□□ -2.23
SCAF8Q9UPN6 MIR488-201ENST00000365739 83 ntBASIC1.14□□□□□ -2.23
SCAF8Q9UPN6 SNORD38.2-201ENST00000384470 69 ntBASIC1.14□□□□□ -2.23
SCAF8Q9UPN6 Y_RNA.588-201ENST00000391254 102 ntBASIC1.14□□□□□ -2.23
SCAF8Q9UPN6 MIR548G-201ENST00000408442 89 ntBASIC1.14□□□□□ -2.23
SCAF8Q9UPN6 AC015818.7-201ENST00000428754 109 ntBASIC1.14□□□□□ -2.23
SCAF8Q9UPN6 AC087499.7-201ENST00000441958 109 ntBASIC1.14□□□□□ -2.23
SCAF8Q9UPN6 AC109327.2-201ENST00000448339 378 ntBASIC1.14□□□□□ -2.23
SCAF8Q9UPN6 RNU7-185P-201ENST00000459215 60 ntBASIC1.14□□□□□ -2.23
SCAF8Q9UPN6 MIR5582-201ENST00000579697 68 ntBASIC1.14□□□□□ -2.23
SCAF8Q9UPN6 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.13□□□□□ -2.23
SCAF8Q9UPN6 Y_RNA.119-201ENST00000363301 96 ntBASIC1.13□□□□□ -2.23
SCAF8Q9UPN6 RNU6-1255P-201ENST00000363434 112 ntBASIC1.13□□□□□ -2.23
SCAF8Q9UPN6 RNU6-1163P-201ENST00000364516 107 ntBASIC1.13□□□□□ -2.23
SCAF8Q9UPN6 Y_RNA.467-201ENST00000384297 102 ntBASIC1.13□□□□□ -2.23
SCAF8Q9UPN6 RNU6-644P-201ENST00000391155 98 ntBASIC1.13□□□□□ -2.23
SCAF8Q9UPN6 SPINT5P-201ENST00000448174 155 ntBASIC1.13□□□□□ -2.23
SCAF8Q9UPN6 RNU7-61P-201ENST00000515897 61 ntBASIC1.13□□□□□ -2.23
SCAF8Q9UPN6 AC090897.1-201ENST00000580909 226 ntBASIC1.13□□□□□ -2.23
SCAF8Q9UPN6 MIR4661-201ENST00000582720 75 ntBASIC1.13□□□□□ -2.23
SCAF8Q9UPN6 MIR4439-201ENST00000583746 80 ntBASIC1.13□□□□□ -2.23
SCAF8Q9UPN6 RNU6-90P-201ENST00000606352 106 ntBASIC1.13□□□□□ -2.23
SCAF8Q9UPN6 AL136317.1-201ENST00000612653 226 ntBASIC1.13□□□□□ -2.23
SCAF8Q9UPN6 HSBP1P2-201ENST00000299671 229 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 208.2 ms