Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 RNU4-83P-201ENST00000410863 133 ntBASIC1.59□□□□□ -2.15
ZNRF3Q9ULT6 AC067940.1-201ENST00000458411 300 ntBASIC1.59□□□□□ -2.15
ZNRF3Q9ULT6 AC090897.1-201ENST00000580909 226 ntBASIC1.59□□□□□ -2.15
ZNRF3Q9ULT6 AC012531.4-201ENST00000616509 177 ntBASIC1.59□□□□□ -2.15
ZNRF3Q9ULT6 MIR6779-201ENST00000617283 64 ntBASIC1.59□□□□□ -2.15
ZNRF3Q9ULT6 Y_RNA.119-201ENST00000363301 96 ntBASIC1.58□□□□□ -2.16
ZNRF3Q9ULT6 SNORD114-26-201ENST00000363543 72 ntBASIC1.58□□□□□ -2.16
ZNRF3Q9ULT6 SNORA25-201ENST00000384384 134 ntBASIC1.58□□□□□ -2.16
ZNRF3Q9ULT6 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
ZNRF3Q9ULT6 AC096949.1-201ENST00000412047 152 ntBASIC1.58□□□□□ -2.16
ZNRF3Q9ULT6 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.58□□□□□ -2.16
ZNRF3Q9ULT6 MIR4500-201ENST00000579472 76 ntBASIC1.58□□□□□ -2.16
ZNRF3Q9ULT6 MIR4491-201ENST00000581087 68 ntBASIC1.58□□□□□ -2.16
ZNRF3Q9ULT6 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.58□□□□□ -2.16
ZNRF3Q9ULT6 AC091304.10-201ENST00000641554 121 ntBASIC1.58□□□□□ -2.16
ZNRF3Q9ULT6 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
ZNRF3Q9ULT6 RNU4-58P-201ENST00000363192 141 ntBASIC1.57□□□□□ -2.16
ZNRF3Q9ULT6 RNU7-40P-201ENST00000516397 64 ntBASIC1.57□□□□□ -2.16
ZNRF3Q9ULT6 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.56□□□□□ -2.16
ZNRF3Q9ULT6 RNU6-1298P-201ENST00000362456 101 ntBASIC1.56□□□□□ -2.16
ZNRF3Q9ULT6 RNA5SP327-201ENST00000362494 101 ntBASIC1.56□□□□□ -2.16
ZNRF3Q9ULT6 RNA5SP325-201ENST00000363756 130 ntBASIC1.56□□□□□ -2.16
ZNRF3Q9ULT6 SNORD114-27-201ENST00000363766 70 ntBASIC1.56□□□□□ -2.16
ZNRF3Q9ULT6 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
ZNRF3Q9ULT6 RPS26P5-201ENST00000418544 335 ntBASIC1.56□□□□□ -2.16
ZNRF3Q9ULT6 AC015818.7-201ENST00000428754 109 ntBASIC1.56□□□□□ -2.16
ZNRF3Q9ULT6 AC087499.7-201ENST00000441958 109 ntBASIC1.56□□□□□ -2.16
ZNRF3Q9ULT6 AC109327.2-201ENST00000448339 378 ntBASIC1.56□□□□□ -2.16
ZNRF3Q9ULT6 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.56□□□□□ -2.16
ZNRF3Q9ULT6 RNU7-61P-201ENST00000515897 61 ntBASIC1.56□□□□□ -2.16
ZNRF3Q9ULT6 Y_RNA.705-201ENST00000516862 110 ntBASIC1.56□□□□□ -2.16
ZNRF3Q9ULT6 MIR6515-201ENST00000619843 57 ntBASIC1.56□□□□□ -2.16
ZNRF3Q9ULT6 PVT1_3.1-201ENST00000620853 95 ntBASIC1.56□□□□□ -2.16
ZNRF3Q9ULT6 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
ZNRF3Q9ULT6 HSBP1P2-201ENST00000299671 229 ntBASIC1.55□□□□□ -2.16
ZNRF3Q9ULT6 Y_RNA.588-201ENST00000391254 102 ntBASIC1.55□□□□□ -2.16
ZNRF3Q9ULT6 RPS29P1-201ENST00000465274 159 ntBASIC1.55□□□□□ -2.16
ZNRF3Q9ULT6 Y_RNA.567-201ENST00000384736 106 ntBASIC1.54□□□□□ -2.16
ZNRF3Q9ULT6 MIR125B2-201ENST00000385128 89 ntBASIC1.54□□□□□ -2.16
ZNRF3Q9ULT6 RNU6-644P-201ENST00000391155 98 ntBASIC1.54□□□□□ -2.16
ZNRF3Q9ULT6 SNORA25.16-201ENST00000516741 121 ntBASIC1.54□□□□□ -2.16
ZNRF3Q9ULT6 MIR4777-201ENST00000583710 86 ntBASIC1.54□□□□□ -2.16
ZNRF3Q9ULT6 Y_RNA.43-201ENST00000362670 111 ntBASIC1.53□□□□□ -2.16
ZNRF3Q9ULT6 Y_RNA.220-201ENST00000364244 109 ntBASIC1.53□□□□□ -2.16
ZNRF3Q9ULT6 Y_RNA.467-201ENST00000384297 102 ntBASIC1.53□□□□□ -2.16
ZNRF3Q9ULT6 RNU6-364P-201ENST00000384387 107 ntBASIC1.53□□□□□ -2.16
ZNRF3Q9ULT6 RNU6-813P-201ENST00000384691 107 ntBASIC1.53□□□□□ -2.16
ZNRF3Q9ULT6 RNU6-997P-201ENST00000384725 107 ntBASIC1.53□□□□□ -2.16
ZNRF3Q9ULT6 MIR100-201ENST00000385259 80 ntBASIC1.53□□□□□ -2.16
ZNRF3Q9ULT6 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.53□□□□□ -2.16
ZNRF3Q9ULT6 AC002429.1-201ENST00000437672 148 ntBASIC1.53□□□□□ -2.16
ZNRF3Q9ULT6 RNU6-531P-201ENST00000516694 104 ntBASIC1.53□□□□□ -2.16
ZNRF3Q9ULT6 MIR4676-201ENST00000583078 72 ntBASIC1.53□□□□□ -2.16
ZNRF3Q9ULT6 MIR548Z-201ENST00000584743 97 ntBASIC1.53□□□□□ -2.16
ZNRF3Q9ULT6 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
ZNRF3Q9ULT6 MIR1-1-201ENST00000362147 71 ntBASIC1.52□□□□□ -2.17
ZNRF3Q9ULT6 RNU6-1163P-201ENST00000364516 107 ntBASIC1.52□□□□□ -2.17
ZNRF3Q9ULT6 RNU6-972P-201ENST00000391208 107 ntBASIC1.52□□□□□ -2.17
ZNRF3Q9ULT6 RNU6-977P-201ENST00000516411 103 ntBASIC1.52□□□□□ -2.17
ZNRF3Q9ULT6 RNU6-86P-201ENST00000606534 107 ntBASIC1.52□□□□□ -2.17
ZNRF3Q9ULT6 MALAT1.1-201ENST00000618249 95 ntBASIC1.52□□□□□ -2.17
ZNRF3Q9ULT6 MIR6767-201ENST00000637302 66 ntBASIC1.52□□□□□ -2.17
ZNRF3Q9ULT6 MIR101-2-201ENST00000362195 79 ntBASIC1.51□□□□□ -2.17
ZNRF3Q9ULT6 SNORD26-201ENST00000384147 75 ntBASIC1.51□□□□□ -2.17
ZNRF3Q9ULT6 RNU6-887P-201ENST00000410660 100 ntBASIC1.51□□□□□ -2.17
ZNRF3Q9ULT6 RNU1-98P-201ENST00000458992 160 ntBASIC1.51□□□□□ -2.17
ZNRF3Q9ULT6 RNU6-1223P-201ENST00000517124 104 ntBASIC1.51□□□□□ -2.17
ZNRF3Q9ULT6 RNU7-156P-201ENST00000517214 74 ntBASIC1.51□□□□□ -2.17
ZNRF3Q9ULT6 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.51□□□□□ -2.17
ZNRF3Q9ULT6 AC019288.1-201ENST00000557918 224 ntBASIC1.51□□□□□ -2.17
ZNRF3Q9ULT6 AC020891.4-201ENST00000605745 93 ntBASIC1.51□□□□□ -2.17
ZNRF3Q9ULT6 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.51□□□□□ -2.17
ZNRF3Q9ULT6 Y_RNA.13-201ENST00000362403 112 ntBASIC1.5□□□□□ -2.17
ZNRF3Q9ULT6 RNU6-571P-201ENST00000384128 107 ntBASIC1.5□□□□□ -2.17
ZNRF3Q9ULT6 MIR938-201ENST00000401216 83 ntBASIC1.5□□□□□ -2.17
ZNRF3Q9ULT6 BX276092.1-201ENST00000427368 251 ntBASIC1.5□□□□□ -2.17
ZNRF3Q9ULT6 RNU6-1194P-201ENST00000516208 104 ntBASIC1.5□□□□□ -2.17
ZNRF3Q9ULT6 RNA5SP61-201ENST00000516453 100 ntBASIC1.5□□□□□ -2.17
ZNRF3Q9ULT6 MIR5582-201ENST00000579697 68 ntBASIC1.5□□□□□ -2.17
ZNRF3Q9ULT6 MIR6082-201ENST00000613604 109 ntBASIC1.5□□□□□ -2.17
ZNRF3Q9ULT6 MIR6788-201ENST00000618842 66 ntBASIC1.5□□□□□ -2.17
ZNRF3Q9ULT6 AC027335.2-201ENST00000624030 375 ntBASIC1.5□□□□□ -2.17
ZNRF3Q9ULT6 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
ZNRF3Q9ULT6 RNU6-1255P-201ENST00000363434 112 ntBASIC1.49□□□□□ -2.17
ZNRF3Q9ULT6 RNU6-1125P-201ENST00000363601 107 ntBASIC1.49□□□□□ -2.17
ZNRF3Q9ULT6 RNU6-1244P-201ENST00000363614 108 ntBASIC1.49□□□□□ -2.17
ZNRF3Q9ULT6 Y_RNA.173-201ENST00000363776 113 ntBASIC1.49□□□□□ -2.17
ZNRF3Q9ULT6 SNORA25.8-201ENST00000364831 128 ntBASIC1.49□□□□□ -2.17
ZNRF3Q9ULT6 RNU6-1131P-201ENST00000364955 107 ntBASIC1.49□□□□□ -2.17
ZNRF3Q9ULT6 Y_RNA.342-201ENST00000365352 113 ntBASIC1.49□□□□□ -2.17
ZNRF3Q9ULT6 RNU6-480P-201ENST00000384332 107 ntBASIC1.49□□□□□ -2.17
ZNRF3Q9ULT6 SNRPGP12-201ENST00000449481 213 ntBASIC1.49□□□□□ -2.17
ZNRF3Q9ULT6 RPS29P23-201ENST00000458635 123 ntBASIC1.49□□□□□ -2.17
ZNRF3Q9ULT6 RNU6-765P-201ENST00000516916 99 ntBASIC1.49□□□□□ -2.17
ZNRF3Q9ULT6 U7.3-201ENST00000616123 62 ntBASIC1.49□□□□□ -2.17
ZNRF3Q9ULT6 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
ZNRF3Q9ULT6 MIR548J-201ENST00000408833 112 ntBASIC1.48□□□□□ -2.17
ZNRF3Q9ULT6 MIR151B-201ENST00000584249 96 ntBASIC1.48□□□□□ -2.17
ZNRF3Q9ULT6 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
ZNRF3Q9ULT6 MIR758-201ENST00000390227 88 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 193.3 ms