Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 RNU6-379P-201ENST00000363813 104 ntBASIC0.25□□□□□ -2.37
SHROOM4Q9ULL8 RNY1P2-201ENST00000364820 117 ntBASIC0.25□□□□□ -2.37
SHROOM4Q9ULL8 RNU6-815P-201ENST00000384080 113 ntBASIC0.25□□□□□ -2.37
SHROOM4Q9ULL8 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
SHROOM4Q9ULL8 AC138869.1-201ENST00000568623 124 ntBASIC0.25□□□□□ -2.37
SHROOM4Q9ULL8 MIR548H5-201ENST00000580314 60 ntBASIC0.24□□□□□ -2.37
SHROOM4Q9ULL8 RNU7-10P-201ENST00000607194 63 ntBASIC0.24□□□□□ -2.37
SHROOM4Q9ULL8 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.24□□□□□ -2.37
SHROOM4Q9ULL8 AC105081.1-201ENST00000617727 106 ntBASIC0.24□□□□□ -2.37
SHROOM4Q9ULL8 Y_RNA.49-201ENST00000362714 112 ntBASIC0.23□□□□□ -2.37
SHROOM4Q9ULL8 Y_RNA.240-201ENST00000364469 95 ntBASIC0.23□□□□□ -2.37
SHROOM4Q9ULL8 RNU6-309P-201ENST00000364573 106 ntBASIC0.23□□□□□ -2.37
SHROOM4Q9ULL8 RNA5SP245-201ENST00000364239 121 ntBASIC0.22□□□□□ -2.37
SHROOM4Q9ULL8 Y_RNA.457-201ENST00000384237 111 ntBASIC0.22□□□□□ -2.37
SHROOM4Q9ULL8 MT-TG-201ENST00000387429 68 ntBASIC0.22□□□□□ -2.37
SHROOM4Q9ULL8 SNORD77B-201ENST00000391112 67 ntBASIC0.22□□□□□ -2.37
SHROOM4Q9ULL8 Y_RNA.690-201ENST00000516603 95 ntBASIC0.22□□□□□ -2.37
SHROOM4Q9ULL8 MIR7107-201ENST00000611489 80 ntBASIC0.22□□□□□ -2.37
SHROOM4Q9ULL8 Y_RNA.366-201ENST00000365540 102 ntBASIC0.22□□□□□ -2.37
SHROOM4Q9ULL8 Y_RNA.423-201ENST00000384057 113 ntBASIC0.22□□□□□ -2.37
SHROOM4Q9ULL8 RNU6-1135P-201ENST00000411083 103 ntBASIC0.22□□□□□ -2.37
SHROOM4Q9ULL8 RNU7-123P-201ENST00000515911 60 ntBASIC0.22□□□□□ -2.37
SHROOM4Q9ULL8 RNU2-60P-201ENST00000517290 128 ntBASIC0.22□□□□□ -2.37
SHROOM4Q9ULL8 RNU6-200P-201ENST00000364743 107 ntBASIC0.21□□□□□ -2.38
SHROOM4Q9ULL8 MIR1468-201ENST00000410600 86 ntBASIC0.21□□□□□ -2.38
SHROOM4Q9ULL8 Y_RNA.610-201ENST00000410681 103 ntBASIC0.21□□□□□ -2.38
SHROOM4Q9ULL8 Y_RNA.298-201ENST00000364960 107 ntBASIC0.2□□□□□ -2.38
SHROOM4Q9ULL8 snoU13.11-201ENST00000459219 104 ntBASIC0.2□□□□□ -2.38
SHROOM4Q9ULL8 RNU7-120P-201ENST00000459334 63 ntBASIC0.2□□□□□ -2.38
SHROOM4Q9ULL8 AL359881.1-201ENST00000602916 267 ntBASIC0.2□□□□□ -2.38
SHROOM4Q9ULL8 MIR371B-201ENST00000638082 66 ntBASIC0.2□□□□□ -2.38
SHROOM4Q9ULL8 Y_RNA.98-201ENST00000363109 102 ntBASIC0.19□□□□□ -2.38
SHROOM4Q9ULL8 RNU6-1126P-201ENST00000384002 107 ntBASIC0.19□□□□□ -2.38
SHROOM4Q9ULL8 MIR635-201ENST00000384830 98 ntBASIC0.19□□□□□ -2.38
SHROOM4Q9ULL8 MIR4500-201ENST00000579472 76 ntBASIC0.19□□□□□ -2.38
SHROOM4Q9ULL8 TUG1_4.1-201ENST00000619464 181 ntBASIC0.19□□□□□ -2.38
SHROOM4Q9ULL8 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.18□□□□□ -2.38
SHROOM4Q9ULL8 Y_RNA.441-201ENST00000384123 112 ntBASIC0.18□□□□□ -2.38
SHROOM4Q9ULL8 RNU6-861P-201ENST00000516745 106 ntBASIC0.18□□□□□ -2.38
SHROOM4Q9ULL8 AL137067.1-201ENST00000615933 120 ntBASIC0.18□□□□□ -2.38
SHROOM4Q9ULL8 RNU6-388P-201ENST00000517012 105 ntBASIC0.17□□□□□ -2.38
SHROOM4Q9ULL8 RNU6-389P-201ENST00000517048 105 ntBASIC0.17□□□□□ -2.38
SHROOM4Q9ULL8 MIR4667-201ENST00000578933 66 ntBASIC0.17□□□□□ -2.38
SHROOM4Q9ULL8 Y_RNA.29-201ENST00000362570 113 ntBASIC0.16□□□□□ -2.38
SHROOM4Q9ULL8 MIR3658-201ENST00000636291 56 ntBASIC0.16□□□□□ -2.38
SHROOM4Q9ULL8 SNORD115-24-201ENST00000363528 82 ntBASIC0.16□□□□□ -2.38
SHROOM4Q9ULL8 SNORA63.5-201ENST00000363548 123 ntBASIC0.16□□□□□ -2.38
SHROOM4Q9ULL8 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.16□□□□□ -2.38
SHROOM4Q9ULL8 RNU6-1321P-201ENST00000390905 107 ntBASIC0.15□□□□□ -2.39
SHROOM4Q9ULL8 AC244505.6-201ENST00000452829 130 ntBASIC0.15□□□□□ -2.39
SHROOM4Q9ULL8 RNU7-48P-201ENST00000458875 63 ntBASIC0.15□□□□□ -2.39
SHROOM4Q9ULL8 Y_RNA.651-201ENST00000459380 103 ntBASIC0.15□□□□□ -2.39
SHROOM4Q9ULL8 RNU5E-3P-201ENST00000515913 68 ntBASIC0.15□□□□□ -2.39
SHROOM4Q9ULL8 RNA5SP214-201ENST00000363378 118 ntBASIC0.14□□□□□ -2.39
SHROOM4Q9ULL8 Y_RNA.272-201ENST00000364696 102 ntBASIC0.14□□□□□ -2.39
SHROOM4Q9ULL8 PCNPP3-201ENST00000393579 471 ntBASIC0.14□□□□□ -2.39
SHROOM4Q9ULL8 MIR548L-201ENST00000408303 86 ntBASIC0.14□□□□□ -2.39
SHROOM4Q9ULL8 MIR101-1-201ENST00000362265 75 ntBASIC0.13□□□□□ -2.39
SHROOM4Q9ULL8 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.13□□□□□ -2.39
SHROOM4Q9ULL8 MIR6755-201ENST00000619993 66 ntBASIC0.13□□□□□ -2.39
SHROOM4Q9ULL8 RNU6-508P-201ENST00000363231 103 ntBASIC0.11□□□□□ -2.39
SHROOM4Q9ULL8 RNU6-302P-201ENST00000365249 107 ntBASIC0.11□□□□□ -2.39
SHROOM4Q9ULL8 Y_RNA.686-201ENST00000516548 134 ntBASIC0.11□□□□□ -2.39
SHROOM4Q9ULL8 SNORD114-16-201ENST00000363044 70 ntBASIC0.1□□□□□ -2.39
SHROOM4Q9ULL8 MIR206-201ENST00000384872 86 ntBASIC0.1□□□□□ -2.39
SHROOM4Q9ULL8 MIR1295A-201ENST00000408463 79 ntBASIC0.1□□□□□ -2.39
SHROOM4Q9ULL8 RNU6-138P-201ENST00000515952 107 ntBASIC0.1□□□□□ -2.39
SHROOM4Q9ULL8 Y_RNA.692-201ENST00000516627 105 ntBASIC0.1□□□□□ -2.39
SHROOM4Q9ULL8 SNORD57-201ENST00000448188 72 ntBASIC0.1□□□□□ -2.39
SHROOM4Q9ULL8 MIR1270-201ENST00000459320 83 ntBASIC0.09□□□□□ -2.4
SHROOM4Q9ULL8 RNU7-2P-201ENST00000516096 62 ntBASIC0.09□□□□□ -2.4
SHROOM4Q9ULL8 AC004792.1-201ENST00000614523 137 ntBASIC0.09□□□□□ -2.4
SHROOM4Q9ULL8 RNU6-726P-201ENST00000364680 107 ntBASIC0.08□□□□□ -2.4
SHROOM4Q9ULL8 Y_RNA.362-201ENST00000365518 110 ntBASIC0.08□□□□□ -2.4
SHROOM4Q9ULL8 RNU6V-201ENST00000384105 107 ntBASIC0.08□□□□□ -2.4
SHROOM4Q9ULL8 MIR513C-201ENST00000401352 84 ntBASIC0.08□□□□□ -2.4
SHROOM4Q9ULL8 AL078595.1-201ENST00000404458 226 ntBASIC0.08□□□□□ -2.4
SHROOM4Q9ULL8 MIR3121-201ENST00000579680 77 ntBASIC0.08□□□□□ -2.4
SHROOM4Q9ULL8 RNU6-682P-201ENST00000363843 106 ntBASIC0.07□□□□□ -2.4
SHROOM4Q9ULL8 SNORD114-9-201ENST00000364370 72 ntBASIC0.07□□□□□ -2.4
SHROOM4Q9ULL8 SNORD115-35-201ENST00000365122 82 ntBASIC0.07□□□□□ -2.4
SHROOM4Q9ULL8 Y_RNA.448-201ENST00000384185 108 ntBASIC0.07□□□□□ -2.4
SHROOM4Q9ULL8 MIR760-201ENST00000390220 80 ntBASIC0.07□□□□□ -2.4
SHROOM4Q9ULL8 MIR759-201ENST00000390224 91 ntBASIC0.07□□□□□ -2.4
SHROOM4Q9ULL8 MIR548I2-201ENST00000408348 149 ntBASIC0.07□□□□□ -2.4
SHROOM4Q9ULL8 HMGN2P22-201ENST00000427588 175 ntBASIC0.07□□□□□ -2.4
SHROOM4Q9ULL8 RPS29P8-201ENST00000445109 171 ntBASIC0.07□□□□□ -2.4
SHROOM4Q9ULL8 SNORA81.3-201ENST00000517283 198 ntBASIC0.07□□□□□ -2.4
SHROOM4Q9ULL8 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.07□□□□□ -2.4
SHROOM4Q9ULL8 Y_RNA.328-201ENST00000365208 113 ntBASIC0.06□□□□□ -2.4
SHROOM4Q9ULL8 RNU4-11P-201ENST00000365287 132 ntBASIC0.06□□□□□ -2.4
SHROOM4Q9ULL8 RNU6-187P-201ENST00000384139 106 ntBASIC0.06□□□□□ -2.4
SHROOM4Q9ULL8 Y_RNA.785-201ENST00000384290 109 ntBASIC0.06□□□□□ -2.4
SHROOM4Q9ULL8 MIR610-201ENST00000385139 96 ntBASIC0.06□□□□□ -2.4
SHROOM4Q9ULL8 Y_RNA.660-201ENST00000516002 120 ntBASIC0.06□□□□□ -2.4
SHROOM4Q9ULL8 AP001362.1-201ENST00000625165 124 ntBASIC0.06□□□□□ -2.4
SHROOM4Q9ULL8 RNU6-151P-201ENST00000364158 107 ntBASIC0.05□□□□□ -2.4
SHROOM4Q9ULL8 RNY4P20-201ENST00000516678 93 ntBASIC0.05□□□□□ -2.4
SHROOM4Q9ULL8 RNA5SP128-201ENST00000365305 116 ntBASIC0.04□□□□□ -2.4
SHROOM4Q9ULL8 RNU6-46P-201ENST00000383860 107 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 175.7 ms