Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 Y_RNA.17-201ENST00000362433 111 ntBASIC1.75□□□□□ -2.13
BRPF3Q9ULD4 RNA5SP327-201ENST00000362494 101 ntBASIC1.75□□□□□ -2.13
BRPF3Q9ULD4 RNU1-42P-201ENST00000364033 160 ntBASIC1.75□□□□□ -2.13
BRPF3Q9ULD4 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.75□□□□□ -2.13
BRPF3Q9ULD4 RNU6-1194P-201ENST00000516208 104 ntBASIC1.75□□□□□ -2.13
BRPF3Q9ULD4 MIR4676-201ENST00000583078 72 ntBASIC1.75□□□□□ -2.13
BRPF3Q9ULD4 AC013244.2-201ENST00000603396 103 ntBASIC1.75□□□□□ -2.13
BRPF3Q9ULD4 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
BRPF3Q9ULD4 MIR450A2-201ENST00000385022 100 ntBASIC1.74□□□□□ -2.13
BRPF3Q9ULD4 Y_RNA.593-201ENST00000410292 98 ntBASIC1.74□□□□□ -2.13
BRPF3Q9ULD4 AC023790.1-201ENST00000482174 347 ntBASIC1.74□□□□□ -2.13
BRPF3Q9ULD4 RNU7-156P-201ENST00000517214 74 ntBASIC1.74□□□□□ -2.13
BRPF3Q9ULD4 MIR4781-201ENST00000585250 76 ntBASIC1.74□□□□□ -2.13
BRPF3Q9ULD4 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
BRPF3Q9ULD4 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
BRPF3Q9ULD4 SNORA25-201ENST00000384384 134 ntBASIC1.73□□□□□ -2.13
BRPF3Q9ULD4 SNORD116-22-201ENST00000384430 92 ntBASIC1.73□□□□□ -2.13
BRPF3Q9ULD4 SNORA26.2-201ENST00000390922 122 ntBASIC1.73□□□□□ -2.13
BRPF3Q9ULD4 AC002429.1-201ENST00000437672 148 ntBASIC1.73□□□□□ -2.13
BRPF3Q9ULD4 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
BRPF3Q9ULD4 MIR101-2-201ENST00000362195 79 ntBASIC1.72□□□□□ -2.13
BRPF3Q9ULD4 RNA5SP99-201ENST00000364020 114 ntBASIC1.72□□□□□ -2.13
BRPF3Q9ULD4 MIR517C-201ENST00000385103 95 ntBASIC1.72□□□□□ -2.13
BRPF3Q9ULD4 RNY4P29-201ENST00000410801 97 ntBASIC1.72□□□□□ -2.13
BRPF3Q9ULD4 AL354695.1-201ENST00000427935 228 ntBASIC1.72□□□□□ -2.13
BRPF3Q9ULD4 RNU6-765P-201ENST00000516916 99 ntBASIC1.72□□□□□ -2.13
BRPF3Q9ULD4 AC062037.1-201ENST00000605302 128 ntBASIC1.72□□□□□ -2.13
BRPF3Q9ULD4 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
BRPF3Q9ULD4 RNU6-369P-201ENST00000362515 102 ntBASIC1.71□□□□□ -2.14
BRPF3Q9ULD4 Y_RNA.42-201ENST00000362660 108 ntBASIC1.71□□□□□ -2.14
BRPF3Q9ULD4 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
BRPF3Q9ULD4 MIR938-201ENST00000401216 83 ntBASIC1.71□□□□□ -2.14
BRPF3Q9ULD4 AC108210.2-201ENST00000503681 201 ntBASIC1.71□□□□□ -2.14
BRPF3Q9ULD4 SNORD53B-201ENST00000577887 78 ntBASIC1.71□□□□□ -2.14
BRPF3Q9ULD4 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
BRPF3Q9ULD4 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
BRPF3Q9ULD4 RNU6-364P-201ENST00000384387 107 ntBASIC1.7□□□□□ -2.14
BRPF3Q9ULD4 MIR100-201ENST00000385259 80 ntBASIC1.7□□□□□ -2.14
BRPF3Q9ULD4 SNORA67.6-201ENST00000391093 99 ntBASIC1.7□□□□□ -2.14
BRPF3Q9ULD4 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.7□□□□□ -2.14
BRPF3Q9ULD4 SNORD100-201ENST00000408573 76 ntBASIC1.7□□□□□ -2.14
BRPF3Q9ULD4 RNU6-402P-201ENST00000410678 103 ntBASIC1.7□□□□□ -2.14
BRPF3Q9ULD4 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.7□□□□□ -2.14
BRPF3Q9ULD4 AC019288.1-201ENST00000557918 224 ntBASIC1.7□□□□□ -2.14
BRPF3Q9ULD4 SNORD92-201ENST00000585078 85 ntBASIC1.7□□□□□ -2.14
BRPF3Q9ULD4 AC027335.2-201ENST00000624030 375 ntBASIC1.7□□□□□ -2.14
BRPF3Q9ULD4 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.69□□□□□ -2.14
BRPF3Q9ULD4 MIR1-1-201ENST00000362147 71 ntBASIC1.69□□□□□ -2.14
BRPF3Q9ULD4 SNORA67.5-201ENST00000391036 107 ntBASIC1.69□□□□□ -2.14
BRPF3Q9ULD4 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.69□□□□□ -2.14
BRPF3Q9ULD4 Y_RNA.609-201ENST00000410669 89 ntBASIC1.69□□□□□ -2.14
BRPF3Q9ULD4 AC067940.1-201ENST00000458411 300 ntBASIC1.69□□□□□ -2.14
BRPF3Q9ULD4 RNU6-977P-201ENST00000516411 103 ntBASIC1.69□□□□□ -2.14
BRPF3Q9ULD4 AC068338.1-201ENST00000565567 176 ntBASIC1.69□□□□□ -2.14
BRPF3Q9ULD4 MIR4524B-201ENST00000581569 115 ntBASIC1.69□□□□□ -2.14
BRPF3Q9ULD4 MIR4804-201ENST00000581683 73 ntBASIC1.69□□□□□ -2.14
BRPF3Q9ULD4 MIR4668-201ENST00000582284 70 ntBASIC1.69□□□□□ -2.14
BRPF3Q9ULD4 MIR494-201ENST00000349529 81 ntBASIC1.68□□□□□ -2.14
BRPF3Q9ULD4 RNY1P10-201ENST00000363268 113 ntBASIC1.68□□□□□ -2.14
BRPF3Q9ULD4 MIR516A2-201ENST00000384888 90 ntBASIC1.68□□□□□ -2.14
BRPF3Q9ULD4 MIR516A1-201ENST00000385033 90 ntBASIC1.68□□□□□ -2.14
BRPF3Q9ULD4 RNU4-62P-201ENST00000410125 130 ntBASIC1.68□□□□□ -2.14
BRPF3Q9ULD4 RN7SKP12-201ENST00000516275 143 ntBASIC1.68□□□□□ -2.14
BRPF3Q9ULD4 SNORA31.24-201ENST00000517232 57 ntBASIC1.68□□□□□ -2.14
BRPF3Q9ULD4 Y_RNA.388-201ENST00000383919 113 ntBASIC1.67□□□□□ -2.14
BRPF3Q9ULD4 RNU6-820P-201ENST00000384273 107 ntBASIC1.67□□□□□ -2.14
BRPF3Q9ULD4 RNY1P4-201ENST00000384595 115 ntBASIC1.67□□□□□ -2.14
BRPF3Q9ULD4 Y_RNA.697-201ENST00000516776 113 ntBASIC1.67□□□□□ -2.14
BRPF3Q9ULD4 MIR548H5-201ENST00000580314 60 ntBASIC1.67□□□□□ -2.14
BRPF3Q9ULD4 IGLL4P-201ENST00000614590 133 ntBASIC1.67□□□□□ -2.14
BRPF3Q9ULD4 AL353997.5-201ENST00000618886 171 ntBASIC1.67□□□□□ -2.14
BRPF3Q9ULD4 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.67□□□□□ -2.14
BRPF3Q9ULD4 Y_RNA.56-201ENST00000362798 112 ntBASIC1.66□□□□□ -2.14
BRPF3Q9ULD4 RNY1P1-201ENST00000364372 112 ntBASIC1.66□□□□□ -2.14
BRPF3Q9ULD4 MIR635-201ENST00000384830 98 ntBASIC1.66□□□□□ -2.14
BRPF3Q9ULD4 RNU6-1254P-201ENST00000391266 104 ntBASIC1.66□□□□□ -2.14
BRPF3Q9ULD4 MIR1827-201ENST00000408549 66 ntBASIC1.66□□□□□ -2.14
BRPF3Q9ULD4 SNORD63B-201ENST00000411005 70 ntBASIC1.66□□□□□ -2.14
BRPF3Q9ULD4 RNU7-102P-201ENST00000458948 62 ntBASIC1.66□□□□□ -2.14
BRPF3Q9ULD4 RNU7-10P-201ENST00000607194 63 ntBASIC1.66□□□□□ -2.14
BRPF3Q9ULD4 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
BRPF3Q9ULD4 RNA5SP432-201ENST00000362480 116 ntBASIC1.65□□□□□ -2.15
BRPF3Q9ULD4 RNU6-219P-201ENST00000364728 107 ntBASIC1.65□□□□□ -2.15
BRPF3Q9ULD4 RNU6-675P-201ENST00000384236 104 ntBASIC1.65□□□□□ -2.15
BRPF3Q9ULD4 Y_RNA.536-201ENST00000384621 113 ntBASIC1.65□□□□□ -2.15
BRPF3Q9ULD4 Y_RNA.620-201ENST00000411009 88 ntBASIC1.65□□□□□ -2.15
BRPF3Q9ULD4 RNU7-106P-201ENST00000459514 67 ntBASIC1.65□□□□□ -2.15
BRPF3Q9ULD4 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.65□□□□□ -2.15
BRPF3Q9ULD4 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.65□□□□□ -2.15
BRPF3Q9ULD4 SNORD36A-201ENST00000362874 73 ntBASIC1.64□□□□□ -2.15
BRPF3Q9ULD4 RNU1-119P-201ENST00000391122 165 ntBASIC1.64□□□□□ -2.15
BRPF3Q9ULD4 RNU6-243P-201ENST00000391140 107 ntBASIC1.64□□□□□ -2.15
BRPF3Q9ULD4 AC108667.1-201ENST00000428618 249 ntBASIC1.64□□□□□ -2.15
BRPF3Q9ULD4 RNU7-56P-201ENST00000458744 62 ntBASIC1.64□□□□□ -2.15
BRPF3Q9ULD4 TRAJ51-201ENST00000504127 63 ntBASIC1.64□□□□□ -2.15
BRPF3Q9ULD4 RNU6-267P-201ENST00000516714 103 ntBASIC1.64□□□□□ -2.15
BRPF3Q9ULD4 MIR520F-201ENST00000384824 87 ntBASIC1.63□□□□□ -2.15
BRPF3Q9ULD4 RNU6-519P-201ENST00000410590 108 ntBASIC1.63□□□□□ -2.15
BRPF3Q9ULD4 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.63□□□□□ -2.15
BRPF3Q9ULD4 AC008608.1-201ENST00000603910 127 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 255.6 ms