Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 SNORD114-10-201ENST00000363409 72 ntBASIC0.47□□□□□ -2.33
GTF3C4Q9UKN8 SNORA36.1-201ENST00000363424 132 ntBASIC0.47□□□□□ -2.33
GTF3C4Q9UKN8 Y_RNA.198-201ENST00000364013 98 ntBASIC0.47□□□□□ -2.33
GTF3C4Q9UKN8 Y_RNA.247-201ENST00000364500 92 ntBASIC0.47□□□□□ -2.33
GTF3C4Q9UKN8 RNU7-2P-201ENST00000516096 62 ntBASIC0.47□□□□□ -2.33
GTF3C4Q9UKN8 SNORD33.1-201ENST00000516213 88 ntBASIC0.47□□□□□ -2.33
GTF3C4Q9UKN8 RNU6-521P-201ENST00000516663 105 ntBASIC0.47□□□□□ -2.33
GTF3C4Q9UKN8 Y_RNA.697-201ENST00000516776 113 ntBASIC0.47□□□□□ -2.33
GTF3C4Q9UKN8 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.47□□□□□ -2.33
GTF3C4Q9UKN8 TUG1_4.1-201ENST00000619464 181 ntBASIC0.47□□□□□ -2.33
GTF3C4Q9UKN8 MIR5087-201ENST00000635826 76 ntBASIC0.47□□□□□ -2.33
GTF3C4Q9UKN8 SNORD114-23-201ENST00000363536 72 ntBASIC0.46□□□□□ -2.34
GTF3C4Q9UKN8 SNORD18A-201ENST00000363753 72 ntBASIC0.46□□□□□ -2.34
GTF3C4Q9UKN8 RNA5SP517-201ENST00000364724 117 ntBASIC0.46□□□□□ -2.34
GTF3C4Q9UKN8 SNORD115-35-201ENST00000365122 82 ntBASIC0.46□□□□□ -2.34
GTF3C4Q9UKN8 Y_RNA.536-201ENST00000384621 113 ntBASIC0.46□□□□□ -2.34
GTF3C4Q9UKN8 RNU6-535P-201ENST00000384722 107 ntBASIC0.46□□□□□ -2.34
GTF3C4Q9UKN8 MIR193B-201ENST00000384907 83 ntBASIC0.46□□□□□ -2.34
GTF3C4Q9UKN8 MIR4500-201ENST00000579472 76 ntBASIC0.46□□□□□ -2.34
GTF3C4Q9UKN8 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.46□□□□□ -2.34
GTF3C4Q9UKN8 Y_RNA.205-201ENST00000364128 113 ntBASIC0.45□□□□□ -2.34
GTF3C4Q9UKN8 MIR548D2-201ENST00000384955 97 ntBASIC0.45□□□□□ -2.34
GTF3C4Q9UKN8 SNORA7.5-201ENST00000410672 110 ntBASIC0.45□□□□□ -2.34
GTF3C4Q9UKN8 RNU7-48P-201ENST00000458875 63 ntBASIC0.45□□□□□ -2.34
GTF3C4Q9UKN8 SNORA68.3-201ENST00000515906 83 ntBASIC0.45□□□□□ -2.34
GTF3C4Q9UKN8 RNU6-1194P-201ENST00000516208 104 ntBASIC0.45□□□□□ -2.34
GTF3C4Q9UKN8 RNU6-659P-201ENST00000516454 104 ntBASIC0.45□□□□□ -2.34
GTF3C4Q9UKN8 RNA5SP94-201ENST00000516917 108 ntBASIC0.45□□□□□ -2.34
GTF3C4Q9UKN8 SNORA25.18-201ENST00000607153 114 ntBASIC0.45□□□□□ -2.34
GTF3C4Q9UKN8 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
GTF3C4Q9UKN8 AL157777.2-201ENST00000258070 137 ntBASIC0.44□□□□□ -2.34
GTF3C4Q9UKN8 SNORD115-19-201ENST00000363098 82 ntBASIC0.44□□□□□ -2.34
GTF3C4Q9UKN8 SNORD115-18-201ENST00000363293 82 ntBASIC0.44□□□□□ -2.34
GTF3C4Q9UKN8 SNORD115-17-201ENST00000364612 82 ntBASIC0.44□□□□□ -2.34
GTF3C4Q9UKN8 Y_RNA.328-201ENST00000365208 113 ntBASIC0.44□□□□□ -2.34
GTF3C4Q9UKN8 MIR548M-201ENST00000408260 86 ntBASIC0.44□□□□□ -2.34
GTF3C4Q9UKN8 AL365222.1-201ENST00000614661 98 ntBASIC0.44□□□□□ -2.34
GTF3C4Q9UKN8 AC010487.4-201ENST00000637027 61 ntBASIC0.44□□□□□ -2.34
GTF3C4Q9UKN8 Y_RNA.127-201ENST00000363386 109 ntBASIC0.43□□□□□ -2.34
GTF3C4Q9UKN8 Y_RNA.299-201ENST00000364973 94 ntBASIC0.43□□□□□ -2.34
GTF3C4Q9UKN8 RNA5SP117-201ENST00000365294 118 ntBASIC0.43□□□□□ -2.34
GTF3C4Q9UKN8 MIR548A1-201ENST00000385041 97 ntBASIC0.43□□□□□ -2.34
GTF3C4Q9UKN8 SNORD77B-201ENST00000391112 67 ntBASIC0.43□□□□□ -2.34
GTF3C4Q9UKN8 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.43□□□□□ -2.34
GTF3C4Q9UKN8 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.43□□□□□ -2.34
GTF3C4Q9UKN8 TRAJ51-201ENST00000504127 63 ntBASIC0.43□□□□□ -2.34
GTF3C4Q9UKN8 RNU6-765P-201ENST00000516916 99 ntBASIC0.43□□□□□ -2.34
GTF3C4Q9UKN8 MIR3163-201ENST00000581592 73 ntBASIC0.43□□□□□ -2.34
GTF3C4Q9UKN8 AC243829.6-201ENST00000612652 106 ntBASIC0.43□□□□□ -2.34
GTF3C4Q9UKN8 MIR3914-2-201ENST00000637339 95 ntBASIC0.43□□□□□ -2.34
GTF3C4Q9UKN8 Y_RNA.362-201ENST00000365518 110 ntBASIC0.42□□□□□ -2.34
GTF3C4Q9UKN8 Y_RNA.567-201ENST00000384736 106 ntBASIC0.42□□□□□ -2.34
GTF3C4Q9UKN8 RNA5SP136-201ENST00000410906 107 ntBASIC0.42□□□□□ -2.34
GTF3C4Q9UKN8 MIR1273G-201ENST00000577677 100 ntBASIC0.42□□□□□ -2.34
GTF3C4Q9UKN8 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
GTF3C4Q9UKN8 RNU4-58P-201ENST00000363192 141 ntBASIC0.41□□□□□ -2.34
GTF3C4Q9UKN8 Y_RNA.213-201ENST00000364178 111 ntBASIC0.41□□□□□ -2.34
GTF3C4Q9UKN8 SNORD50.2-201ENST00000365465 70 ntBASIC0.41□□□□□ -2.34
GTF3C4Q9UKN8 RNU6-80P-201ENST00000384195 107 ntBASIC0.41□□□□□ -2.34
GTF3C4Q9UKN8 RNU6-1333P-201ENST00000516162 93 ntBASIC0.41□□□□□ -2.34
GTF3C4Q9UKN8 RNU6-1006P-201ENST00000516998 103 ntBASIC0.41□□□□□ -2.34
GTF3C4Q9UKN8 MIR3613-201ENST00000579844 87 ntBASIC0.41□□□□□ -2.34
GTF3C4Q9UKN8 MIR103A1-201ENST00000362165 78 ntBASIC0.4□□□□□ -2.35
GTF3C4Q9UKN8 Y_RNA.49-201ENST00000362714 112 ntBASIC0.4□□□□□ -2.35
GTF3C4Q9UKN8 RNU4-67P-201ENST00000364569 141 ntBASIC0.4□□□□□ -2.35
GTF3C4Q9UKN8 Y_RNA.360-201ENST00000365512 102 ntBASIC0.4□□□□□ -2.35
GTF3C4Q9UKN8 RNU6-959P-201ENST00000384671 107 ntBASIC0.4□□□□□ -2.35
GTF3C4Q9UKN8 RNU7-106P-201ENST00000459514 67 ntBASIC0.4□□□□□ -2.35
GTF3C4Q9UKN8 Y_RNA.712-201ENST00000517011 92 ntBASIC0.4□□□□□ -2.35
GTF3C4Q9UKN8 AP003327.1-201ENST00000529684 127 ntBASIC0.4□□□□□ -2.35
GTF3C4Q9UKN8 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.4□□□□□ -2.35
GTF3C4Q9UKN8 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.4□□□□□ -2.35
GTF3C4Q9UKN8 RNA5SP325-201ENST00000363756 130 ntBASIC0.39□□□□□ -2.35
GTF3C4Q9UKN8 RNU6-865P-201ENST00000364772 107 ntBASIC0.39□□□□□ -2.35
GTF3C4Q9UKN8 Y_RNA.353-201ENST00000365440 108 ntBASIC0.39□□□□□ -2.35
GTF3C4Q9UKN8 MIR539-201ENST00000365690 78 ntBASIC0.39□□□□□ -2.35
GTF3C4Q9UKN8 SNORD116-14-201ENST00000383894 92 ntBASIC0.39□□□□□ -2.35
GTF3C4Q9UKN8 SNORD116-17-201ENST00000383929 92 ntBASIC0.39□□□□□ -2.35
GTF3C4Q9UKN8 SNORA8.2-201ENST00000384372 139 ntBASIC0.39□□□□□ -2.35
GTF3C4Q9UKN8 SNORD116-15-201ENST00000384445 92 ntBASIC0.39□□□□□ -2.35
GTF3C4Q9UKN8 RNU6-429P-201ENST00000384582 108 ntBASIC0.39□□□□□ -2.35
GTF3C4Q9UKN8 SNORD116-19-201ENST00000384729 92 ntBASIC0.39□□□□□ -2.35
GTF3C4Q9UKN8 MIR759-201ENST00000390224 91 ntBASIC0.39□□□□□ -2.35
GTF3C4Q9UKN8 Y_RNA.649-201ENST00000459077 103 ntBASIC0.39□□□□□ -2.35
GTF3C4Q9UKN8 MIR4752-201ENST00000579672 72 ntBASIC0.39□□□□□ -2.35
GTF3C4Q9UKN8 MIR3910-1-201ENST00000580936 111 ntBASIC0.39□□□□□ -2.35
GTF3C4Q9UKN8 MIR7107-201ENST00000611489 80 ntBASIC0.39□□□□□ -2.35
GTF3C4Q9UKN8 AC092634.7-201ENST00000621022 103 ntBASIC0.39□□□□□ -2.35
GTF3C4Q9UKN8 AC244669.1-204ENST00000621564 178 ntBASIC0.39□□□□□ -2.35
GTF3C4Q9UKN8 AP001362.1-201ENST00000625165 124 ntBASIC0.39□□□□□ -2.35
GTF3C4Q9UKN8 AC090625.1-201ENST00000357130 210 ntBASIC0.38□□□□□ -2.35
GTF3C4Q9UKN8 MIR101-2-201ENST00000362195 79 ntBASIC0.38□□□□□ -2.35
GTF3C4Q9UKN8 RNU6-363P-201ENST00000362895 105 ntBASIC0.38□□□□□ -2.35
GTF3C4Q9UKN8 Y_RNA.98-201ENST00000363109 102 ntBASIC0.38□□□□□ -2.35
GTF3C4Q9UKN8 VTRNA1-3-201ENST00000365645 89 ntBASIC0.38□□□□□ -2.35
GTF3C4Q9UKN8 SNORA50A-201ENST00000384225 134 ntBASIC0.38□□□□□ -2.35
GTF3C4Q9UKN8 SNORD28-201ENST00000384706 75 ntBASIC0.38□□□□□ -2.35
GTF3C4Q9UKN8 RNU6-816P-201ENST00000390914 107 ntBASIC0.38□□□□□ -2.35
GTF3C4Q9UKN8 RNU6-1268P-201ENST00000391214 107 ntBASIC0.38□□□□□ -2.35
GTF3C4Q9UKN8 RNU6-1239P-201ENST00000391310 107 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 172.6 ms