Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 RNA5SP220-201ENST00000516298 104 ntBASIC1.45□□□□□ -2.18
DDX41Q9UJV9 MTND5P40-201ENST00000559945 246 ntBASIC1.45□□□□□ -2.18
DDX41Q9UJV9 MIR6082-201ENST00000613604 109 ntBASIC1.45□□□□□ -2.18
DDX41Q9UJV9 RNU6-766P-201ENST00000362478 107 ntBASIC1.44□□□□□ -2.18
DDX41Q9UJV9 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
DDX41Q9UJV9 MIR520F-201ENST00000384824 87 ntBASIC1.44□□□□□ -2.18
DDX41Q9UJV9 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
DDX41Q9UJV9 UBL5P1-201ENST00000507979 193 ntBASIC1.44□□□□□ -2.18
DDX41Q9UJV9 RNU6-1194P-201ENST00000516208 104 ntBASIC1.44□□□□□ -2.18
DDX41Q9UJV9 SNORA25.16-201ENST00000516741 121 ntBASIC1.44□□□□□ -2.18
DDX41Q9UJV9 RNU6-765P-201ENST00000516916 99 ntBASIC1.44□□□□□ -2.18
DDX41Q9UJV9 MIR4804-201ENST00000581683 73 ntBASIC1.44□□□□□ -2.18
DDX41Q9UJV9 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.44□□□□□ -2.18
DDX41Q9UJV9 MIR96-201ENST00000362288 78 ntBASIC1.43□□□□□ -2.18
DDX41Q9UJV9 SNORD45B-201ENST00000364617 72 ntBASIC1.43□□□□□ -2.18
DDX41Q9UJV9 Y_RNA.601-201ENST00000410500 113 ntBASIC1.43□□□□□ -2.18
DDX41Q9UJV9 SPINT5P-201ENST00000448174 155 ntBASIC1.43□□□□□ -2.18
DDX41Q9UJV9 SNORD124-201ENST00000459577 104 ntBASIC1.43□□□□□ -2.18
DDX41Q9UJV9 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.43□□□□□ -2.18
DDX41Q9UJV9 SNORD92-201ENST00000585078 85 ntBASIC1.43□□□□□ -2.18
DDX41Q9UJV9 AL078603.1-201ENST00000603824 313 ntBASIC1.43□□□□□ -2.18
DDX41Q9UJV9 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
DDX41Q9UJV9 MIR101-2-201ENST00000362195 79 ntBASIC1.42□□□□□ -2.18
DDX41Q9UJV9 Y_RNA.13-201ENST00000362403 112 ntBASIC1.42□□□□□ -2.18
DDX41Q9UJV9 Y_RNA.659-201ENST00000515994 113 ntBASIC1.42□□□□□ -2.18
DDX41Q9UJV9 RNU6-531P-201ENST00000516694 104 ntBASIC1.42□□□□□ -2.18
DDX41Q9UJV9 AC090897.1-201ENST00000580909 226 ntBASIC1.42□□□□□ -2.18
DDX41Q9UJV9 AC025627.3-201ENST00000582078 182 ntBASIC1.42□□□□□ -2.18
DDX41Q9UJV9 RNU6-90P-201ENST00000606352 106 ntBASIC1.42□□□□□ -2.18
DDX41Q9UJV9 RMST_2.1-201ENST00000617263 136 ntBASIC1.42□□□□□ -2.18
DDX41Q9UJV9 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
DDX41Q9UJV9 MIR450A1-201ENST00000362262 91 ntBASIC1.41□□□□□ -2.18
DDX41Q9UJV9 MTATP6P29-201ENST00000415057 132 ntBASIC1.41□□□□□ -2.18
DDX41Q9UJV9 RNU6-904P-201ENST00000516206 101 ntBASIC1.41□□□□□ -2.18
DDX41Q9UJV9 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.41□□□□□ -2.18
DDX41Q9UJV9 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
DDX41Q9UJV9 RNU6-369P-201ENST00000362515 102 ntBASIC1.4□□□□□ -2.19
DDX41Q9UJV9 Y_RNA.544-201ENST00000384650 113 ntBASIC1.4□□□□□ -2.19
DDX41Q9UJV9 RNU7-56P-201ENST00000458744 62 ntBASIC1.4□□□□□ -2.19
DDX41Q9UJV9 RNU7-102P-201ENST00000458948 62 ntBASIC1.4□□□□□ -2.19
DDX41Q9UJV9 SCARNA23-201ENST00000516060 130 ntBASIC1.4□□□□□ -2.19
DDX41Q9UJV9 MIR8066-201ENST00000617280 78 ntBASIC1.4□□□□□ -2.19
DDX41Q9UJV9 Y_RNA.818-201ENST00000618813 71 ntBASIC1.4□□□□□ -2.19
DDX41Q9UJV9 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.4□□□□□ -2.19
DDX41Q9UJV9 HSBP1P2-201ENST00000299671 229 ntBASIC1.39□□□□□ -2.19
DDX41Q9UJV9 RNU6-153P-201ENST00000364422 104 ntBASIC1.39□□□□□ -2.19
DDX41Q9UJV9 RNU6-147P-201ENST00000383983 107 ntBASIC1.39□□□□□ -2.19
DDX41Q9UJV9 MIR548G-201ENST00000408442 89 ntBASIC1.39□□□□□ -2.19
DDX41Q9UJV9 RNU6-1006P-201ENST00000516998 103 ntBASIC1.39□□□□□ -2.19
DDX41Q9UJV9 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
DDX41Q9UJV9 SNORD114-27-201ENST00000363766 70 ntBASIC1.38□□□□□ -2.19
DDX41Q9UJV9 RNU6-32P-201ENST00000383948 107 ntBASIC1.38□□□□□ -2.19
DDX41Q9UJV9 RNU6-13P-201ENST00000384248 107 ntBASIC1.38□□□□□ -2.19
DDX41Q9UJV9 RNU6-12P-201ENST00000384604 107 ntBASIC1.38□□□□□ -2.19
DDX41Q9UJV9 RNU6-41P-201ENST00000384741 107 ntBASIC1.38□□□□□ -2.19
DDX41Q9UJV9 SNORD105-201ENST00000386910 85 ntBASIC1.38□□□□□ -2.19
DDX41Q9UJV9 MIR4439-201ENST00000583746 80 ntBASIC1.38□□□□□ -2.19
DDX41Q9UJV9 RNU7-10P-201ENST00000607194 63 ntBASIC1.38□□□□□ -2.19
DDX41Q9UJV9 MIR6734-201ENST00000621166 68 ntBASIC1.38□□□□□ -2.19
DDX41Q9UJV9 Y_RNA.42-201ENST00000362660 108 ntBASIC1.37□□□□□ -2.19
DDX41Q9UJV9 Y_RNA.697-201ENST00000516776 113 ntBASIC1.37□□□□□ -2.19
DDX41Q9UJV9 AC013244.2-201ENST00000603396 103 ntBASIC1.37□□□□□ -2.19
DDX41Q9UJV9 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
DDX41Q9UJV9 Y_RNA.96-201ENST00000363092 109 ntBASIC1.36□□□□□ -2.19
DDX41Q9UJV9 MIR590-201ENST00000385008 97 ntBASIC1.36□□□□□ -2.19
DDX41Q9UJV9 MIR520H-201ENST00000385126 88 ntBASIC1.36□□□□□ -2.19
DDX41Q9UJV9 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
DDX41Q9UJV9 RNU6-571P-201ENST00000384128 107 ntBASIC1.35□□□□□ -2.19
DDX41Q9UJV9 SNORA19.1-201ENST00000410656 129 ntBASIC1.35□□□□□ -2.19
DDX41Q9UJV9 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.35□□□□□ -2.19
DDX41Q9UJV9 RNA5SP255-201ENST00000516370 107 ntBASIC1.35□□□□□ -2.19
DDX41Q9UJV9 AP003327.1-201ENST00000529684 127 ntBASIC1.35□□□□□ -2.19
DDX41Q9UJV9 MIR548H5-201ENST00000580314 60 ntBASIC1.35□□□□□ -2.19
DDX41Q9UJV9 Y_RNA.247-201ENST00000364500 92 ntBASIC1.34□□□□□ -2.19
DDX41Q9UJV9 RNU1-93P-201ENST00000364704 169 ntBASIC1.34□□□□□ -2.19
DDX41Q9UJV9 RNU6-448P-201ENST00000517052 107 ntBASIC1.34□□□□□ -2.19
DDX41Q9UJV9 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.34□□□□□ -2.2
DDX41Q9UJV9 Y_RNA.56-201ENST00000362798 112 ntBASIC1.33□□□□□ -2.2
DDX41Q9UJV9 Y_RNA.495-201ENST00000384435 112 ntBASIC1.33□□□□□ -2.2
DDX41Q9UJV9 Y_RNA.567-201ENST00000384736 106 ntBASIC1.33□□□□□ -2.2
DDX41Q9UJV9 MIR1285-1-201ENST00000408593 84 ntBASIC1.33□□□□□ -2.2
DDX41Q9UJV9 BX276092.1-201ENST00000427368 251 ntBASIC1.33□□□□□ -2.2
DDX41Q9UJV9 MIR4661-201ENST00000582720 75 ntBASIC1.33□□□□□ -2.2
DDX41Q9UJV9 MIR2052-201ENST00000636055 55 ntBASIC1.33□□□□□ -2.2
DDX41Q9UJV9 Y_RNA.93-201ENST00000363066 109 ntBASIC1.32□□□□□ -2.2
DDX41Q9UJV9 Y_RNA.95-201ENST00000363079 95 ntBASIC1.32□□□□□ -2.2
DDX41Q9UJV9 Y_RNA.107-201ENST00000363190 121 ntBASIC1.32□□□□□ -2.2
DDX41Q9UJV9 Y_RNA.540-201ENST00000384638 111 ntBASIC1.32□□□□□ -2.2
DDX41Q9UJV9 OR2A41P-201ENST00000473586 105 ntBASIC1.32□□□□□ -2.2
DDX41Q9UJV9 MIR3613-201ENST00000579844 87 ntBASIC1.32□□□□□ -2.2
DDX41Q9UJV9 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.32□□□□□ -2.2
DDX41Q9UJV9 MIR635-201ENST00000384830 98 ntBASIC1.31□□□□□ -2.2
DDX41Q9UJV9 MIR520E-201ENST00000384867 87 ntBASIC1.31□□□□□ -2.2
DDX41Q9UJV9 MIR7-2-201ENST00000384970 110 ntBASIC1.31□□□□□ -2.2
DDX41Q9UJV9 RPS29P1-201ENST00000465274 159 ntBASIC1.31□□□□□ -2.2
DDX41Q9UJV9 AC008608.1-201ENST00000603910 127 ntBASIC1.31□□□□□ -2.2
DDX41Q9UJV9 RNU6-170P-201ENST00000362832 104 ntBASIC1.3□□□□□ -2.2
DDX41Q9UJV9 RNU6-1125P-201ENST00000363601 107 ntBASIC1.3□□□□□ -2.2
DDX41Q9UJV9 RNU6-480P-201ENST00000384332 107 ntBASIC1.3□□□□□ -2.2
DDX41Q9UJV9 Y_RNA.536-201ENST00000384621 113 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 172.6 ms